RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 USPL1Q5W0Q7 1092 aa28.07■■■□□ 2.08
LIMD2-205ENST00000578402 AACSQ86V21 672 aa28.07■■■□□ 2.08
LIMD2-205ENST00000578402 RGPD3A6NKT7 1758 aaPredicted RBP28.06■■■□□ 2.08
LIMD2-205ENST00000578402 RGPD4Q7Z3J3 1758 aa28.06■■■□□ 2.08
LIMD2-205ENST00000578402 SEC24BO95487 1268 aa28.06■■■□□ 2.08
LIMD2-205ENST00000578402 ANP32AP39687 249 aaKnown RBP28.06■■■□□ 2.08
LIMD2-205ENST00000578402 TXNRD1Q16881 649 aa28.06■■■□□ 2.08
LIMD2-205ENST00000578402 GPR108Q9NPR9 543 aa28.06■■■□□ 2.08
LIMD2-205ENST00000578402 DDX60Q8IY21 1712 aaKnown RBP28.06■■■□□ 2.08
LIMD2-205ENST00000578402 ERC2O15083 957 aa28.05■■■□□ 2.08
LIMD2-205ENST00000578402 TBC1D9Q6ZT07 1266 aa28.05■■■□□ 2.08
LIMD2-205ENST00000578402 ATG9AQ7Z3C6 839 aa28.05■■■□□ 2.08
LIMD2-205ENST00000578402 PI4K2BQ8TCG2 481 aa28.05■■■□□ 2.08
LIMD2-205ENST00000578402 EAF2Q96CJ1 260 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-205ENST00000578402 ECHDC1Q9NTX5 307 aa28.05■■■□□ 2.08
LIMD2-205ENST00000578402 EP400Q96L91 3159 aa28.04■■■□□ 2.08
LIMD2-205ENST00000578402 GLRX3O76003 335 aaKnown RBP28.04■■■□□ 2.08
LIMD2-205ENST00000578402 SSFA2P28290 1259 aa28.04■■■□□ 2.08
LIMD2-205ENST00000578402 RFC4P35249 363 aa28.04■■■□□ 2.08
LIMD2-205ENST00000578402 TNS1Q9HBL0 1735 aaKnown RBP28.04■■■□□ 2.08
LIMD2-205ENST00000578402 RTL9Q8NET4 1388 aa28.03■■■□□ 2.08
LIMD2-205ENST00000578402 AMIGO3Q86WK7 504 aa28.03■■■□□ 2.08
LIMD2-205ENST00000578402 SRP68Q9UHB9 627 aaKnown RBP28.03■■■□□ 2.08
LIMD2-205ENST00000578402 ANKRD18BA2A2Z9 1011 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 TFCP2Q12800 502 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 TNNI3KQ59H18 835 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 TSHZ3Q63HK5 1081 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 NYXQ9GZU5 481 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 GREM2Q9H772 168 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 FPGT-TNNI3KV9GXZ4 949 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 ITGA6P23229 1130 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 TBC1D9BQ66K14 1250 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 CASC1Q6TDU7 716 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 PROM2Q8N271 834 aa28.02■■■□□ 2.08
LIMD2-205ENST00000578402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.02■■■□□ 2.08
LIMD2-205ENST00000578402 LRP5O75197 1615 aa28.01■■■□□ 2.07
LIMD2-205ENST00000578402 APBA3O96018 575 aa28.01■■■□□ 2.07
LIMD2-205ENST00000578402 TAF7LQ5H9L4 462 aa28.01■■■□□ 2.07
LIMD2-205ENST00000578402 ZNF594Q96JF6 807 aaPredicted RBP28.01■■■□□ 2.07
LIMD2-205ENST00000578402 SETDB2Q96T68 719 aa28.01■■■□□ 2.07
LIMD2-205ENST00000578402 SMIM5Q71RC9 77 aa28■■■□□ 2.07
LIMD2-205ENST00000578402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.99■■■□□ 2.07
LIMD2-205ENST00000578402 FAM177BA6PVY3 158 aa27.99■■■□□ 2.07
LIMD2-205ENST00000578402 PHF14O94880 888 aa27.98■■■□□ 2.07
LIMD2-205ENST00000578402 HCLS1P14317 486 aaPredicted RBP27.98■■■□□ 2.07
LIMD2-205ENST00000578402 CCDC152Q4G0S7 254 aa27.98■■■□□ 2.07
LIMD2-205ENST00000578402 LRRC24Q50LG9 513 aa27.98■■■□□ 2.07
LIMD2-205ENST00000578402 SLC10A5Q5PT55 438 aa27.98■■■□□ 2.07
LIMD2-205ENST00000578402 CCDC8Q9H0W5 538 aaPredicted RBP27.97■■■□□ 2.07
LIMD2-205ENST00000578402 TBC1D32Q96NH3 1257 aa27.97■■■□□ 2.07
LIMD2-205ENST00000578402 CCDC85AQ96PX6 553 aaPredicted RBP27.97■■■□□ 2.07
LIMD2-205ENST00000578402 CEP126Q9P2H0 1117 aa27.97■■■□□ 2.07
LIMD2-205ENST00000578402 ZNF609O15014 1411 aa27.96■■■□□ 2.07
LIMD2-205ENST00000578402 TRIM6-TRIM34B2RNG4 842 aa27.96■■■□□ 2.07
LIMD2-205ENST00000578402 MFAP1P55081 439 aaKnown RBP27.96■■■□□ 2.07
LIMD2-205ENST00000578402 PUS3Q9BZE2 481 aaKnown RBP27.96■■■□□ 2.07
LIMD2-205ENST00000578402 CNTROBQ8N137 903 aa27.95■■■□□ 2.06
LIMD2-205ENST00000578402 CARMIL3Q8ND23 1372 aa27.95■■■□□ 2.06
LIMD2-205ENST00000578402 ERFEQ4G0M1 354 aa27.94■■■□□ 2.06
LIMD2-205ENST00000578402 LDHAL6AQ6ZMR3 332 aa27.94■■■□□ 2.06
LIMD2-205ENST00000578402 BICDL1Q6ZP65 573 aa27.94■■■□□ 2.06
LIMD2-205ENST00000578402 TLR7Q9NYK1 1049 aaKnown RBP27.94■■■□□ 2.06
LIMD2-205ENST00000578402 DBNLQ9UJU6 430 aaKnown RBP27.94■■■□□ 2.06
LIMD2-205ENST00000578402 AKAP2Q9Y2D5 859 aa27.94■■■□□ 2.06
LIMD2-205ENST00000578402 RIPOR2Q9Y4F9 1068 aa27.94■■■□□ 2.06
LIMD2-205ENST00000578402 SF3B3Q15393 1217 aaKnown RBP27.93■■■□□ 2.06
LIMD2-205ENST00000578402 TPTE2Q6XPS3 522 aa27.93■■■□□ 2.06
LIMD2-205ENST00000578402 NBPF5PQ86XG9 351 aaPredicted RBP27.93■■■□□ 2.06
LIMD2-205ENST00000578402 AK9Q5TCS8 1911 aa27.93■■■□□ 2.06
LIMD2-205ENST00000578402 RIC1Q4ADV7 1423 aa27.93■■■□□ 2.06
LIMD2-205ENST00000578402 RILPL2Q969X0 211 aa27.92■■■□□ 2.06
LIMD2-205ENST00000578402 ATP5JP18859 108 aa27.92■■■□□ 2.06
LIMD2-205ENST00000578402 GTF2E1P29083 439 aaPredicted RBP27.92■■■□□ 2.06
LIMD2-205ENST00000578402 AKT1S1Q96B36 256 aa27.92■■■□□ 2.06
LIMD2-205ENST00000578402 C22orf23Q9BZE7 217 aa27.91■■■□□ 2.06
LIMD2-205ENST00000578402 CNNM1Q9NRU3 951 aa27.91■■■□□ 2.06
LIMD2-205ENST00000578402 GYS1P13807 737 aa27.9■■■□□ 2.06
LIMD2-205ENST00000578402 ABCC12Q96J65 1359 aa27.89■■■□□ 2.06
LIMD2-205ENST00000578402 MROH5Q6ZUA9 1318 aa27.89■■■□□ 2.06
LIMD2-205ENST00000578402 NFIXQ14938 502 aa27.89■■■□□ 2.06
LIMD2-205ENST00000578402 EVI5LQ96CN4 794 aa27.89■■■□□ 2.06
LIMD2-205ENST00000578402 DDRGK1Q96HY6 314 aa27.89■■■□□ 2.06
LIMD2-205ENST00000578402 DBNDD2Q9BQY9 259 aa27.89■■■□□ 2.06
LIMD2-205ENST00000578402 CASZ1Q86V15 1759 aa27.88■■■□□ 2.05
LIMD2-205ENST00000578402 A0A1B0GUL7 405 aa27.88■■■□□ 2.05
LIMD2-205ENST00000578402 CHMLP26374 656 aa27.88■■■□□ 2.05
LIMD2-205ENST00000578402 METTL24Q5JXM2 366 aa27.88■■■□□ 2.05
LIMD2-205ENST00000578402 FLAD1Q8NFF5 587 aa27.88■■■□□ 2.05
LIMD2-205ENST00000578402 RBM25P49756 843 aaKnown RBP27.87■■■□□ 2.05
LIMD2-205ENST00000578402 IPO9Q96P70 1041 aaKnown RBP27.87■■■□□ 2.05
LIMD2-205ENST00000578402 CDC5LQ99459 802 aaKnown RBP27.87■■■□□ 2.05
LIMD2-205ENST00000578402 REC8O95072 547 aa27.87■■■□□ 2.05
LIMD2-205ENST00000578402 IGHMBP2P38935 993 aaKnown RBP27.87■■■□□ 2.05
LIMD2-205ENST00000578402 ZNF827Q17R98 1081 aa27.87■■■□□ 2.05
LIMD2-205ENST00000578402 VGLL2Q8N8G2 317 aa27.87■■■□□ 2.05
LIMD2-205ENST00000578402 NEUROD6Q96NK8 337 aa27.86■■■□□ 2.05
LIMD2-205ENST00000578402 NLRP3Q96P20 1036 aa27.86■■■□□ 2.05
LIMD2-205ENST00000578402 MPHOSPH8Q99549 860 aa27.86■■■□□ 2.05
LIMD2-205ENST00000578402 TFCP2L1Q9NZI6 479 aa27.86■■■□□ 2.05
LIMD2-205ENST00000578402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms