RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 ZSCAN22P10073 491 aaPredicted RBP13.67□□□□□ -0.22
GGA3-205ENST00000578348 MCM5P33992 734 aa13.67□□□□□ -0.22
GGA3-205ENST00000578348 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
GGA3-205ENST00000578348 SIL1Q9H173 461 aa13.67□□□□□ -0.22
GGA3-205ENST00000578348 LIMCH1Q9UPQ0 1083 aa13.67□□□□□ -0.22
GGA3-205ENST00000578348 TCHHQ07283 1943 aa13.67□□□□□ -0.22
GGA3-205ENST00000578348 STX6O43752 255 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
GGA3-205ENST00000578348 SYT1P21579 422 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
GGA3-205ENST00000578348 DTNBO60941 627 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 TERF1P54274 439 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 PTPN12Q05209 780 aaKnown RBP13.66□□□□□ -0.22
GGA3-205ENST00000578348 CCDC191Q8NCU4 936 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 PIGBQ92521 554 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
GGA3-205ENST00000578348 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
GGA3-205ENST00000578348 LARGE1O95461 756 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 TMEM87AQ8NBN3 555 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 PHLPP1O60346 1717 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 HIP1O00291 1037 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 FIBPO43427 364 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
GGA3-205ENST00000578348 CSPP1Q1MSJ5 1256 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 CCDC183Q5T5S1 534 aa13.65□□□□□ -0.22
GGA3-205ENST00000578348 CCDC8Q9H0W5 538 aaPredicted RBP13.65□□□□□ -0.22
GGA3-205ENST00000578348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.65□□□□□ -0.22
GGA3-205ENST00000578348 NRAPQ86VF7 1730 aa13.65□□□□□ -0.23
GGA3-205ENST00000578348 BCL9O00512 1426 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 F13A1P00488 732 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 FOXO4P98177 505 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 MPNDQ8N594 471 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 UQCRHP07919 91 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 PTH1RQ03431 593 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 CCDC83Q8IWF9 413 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
GGA3-205ENST00000578348 TLR7Q9NYK1 1049 aaKnown RBP13.64□□□□□ -0.23
GGA3-205ENST00000578348 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
GGA3-205ENST00000578348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.232e-10■■■□□ 18.4
GGA3-205ENST00000578348 STARD3NLO95772 234 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 UBE2HP62256 183 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 ADCK5Q3MIX3 580 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 PRPF40BQ6NWY9 871 aaKnown RBP13.63□□□□□ -0.23
GGA3-205ENST00000578348 LMBR1LQ6UX01 489 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 DNAJC10Q8IXB1 793 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 ISCA1Q9BUE6 129 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 PDCL3Q9H2J4 239 aa13.63□□□□□ -0.23
GGA3-205ENST00000578348 EXOC5O00471 708 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
GGA3-205ENST00000578348 GJB2P29033 226 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
GGA3-205ENST00000578348 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
GGA3-205ENST00000578348 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 TFCP2Q12800 502 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 DOT1LQ8TEK3 1739 aa13.62□□□□□ -0.23
GGA3-205ENST00000578348 KIAA2012Q0VF49 1180 aa13.61□□□□□ -0.23
GGA3-205ENST00000578348 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
GGA3-205ENST00000578348 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
GGA3-205ENST00000578348 ATP5JP18859 108 aa13.61□□□□□ -0.23
GGA3-205ENST00000578348 DNM1Q05193 864 aaKnown RBP13.61□□□□□ -0.23
GGA3-205ENST00000578348 SNRKQ9NRH2 765 aa13.61□□□□□ -0.23
GGA3-205ENST00000578348 RFX7Q2KHR2 1363 aa13.61□□□□□ -0.23
GGA3-205ENST00000578348 LETM1O95202 739 aaPredicted RBP13.6□□□□□ -0.23
GGA3-205ENST00000578348 UVSSAQ2YD98 709 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 VPS53Q5VIR6 699 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
GGA3-205ENST00000578348 BOLA2Q9H3K6 86 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 DBNLQ9UJU6 430 aaKnown RBP13.6□□□□□ -0.23
GGA3-205ENST00000578348 THRAP3Q9Y2W1 955 aaKnown RBP13.6□□□□□ -0.23
GGA3-205ENST00000578348 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
GGA3-205ENST00000578348 ADCY5O95622 1261 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 GPR108Q9NPR9 543 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 CHMP3Q9Y3E7 222 aa13.6□□□□□ -0.23
GGA3-205ENST00000578348 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 KCNJ4P48050 445 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 MAP3K15Q6ZN16 1313 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 ANKRD36CQ5JPF3 1778 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 CIAO1O76071 339 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
GGA3-205ENST00000578348 IL15P40933 162 aaPredicted RBP13.59□□□□□ -0.23
GGA3-205ENST00000578348 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 NMIQ13287 307 aaPredicted RBP13.59□□□□□ -0.23
GGA3-205ENST00000578348 ME3Q16798 604 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 DNTTIP2Q5QJE6 756 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms