RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 RAB11FIP3O75154 756 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 SSFA2P28290 1259 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 CTSWP56202 376 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 SIL1Q9H173 461 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 CACNA1SQ13698 1873 aa16.23■□□□□ 0.19
CTC1-203ENST00000578240 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
CTC1-203ENST00000578240 GSPT1P15170 499 aaKnown RBP16.23■□□□□ 0.19
CTC1-203ENST00000578240 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
CTC1-203ENST00000578240 KIF1BPQ96EK5 621 aa16.23■□□□□ 0.19
CTC1-203ENST00000578240 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
CTC1-203ENST00000578240 BACH2Q9BYV9 841 aa16.23■□□□□ 0.19
CTC1-203ENST00000578240 ANO8Q9HCE9 1232 aaPredicted RBP16.23■□□□□ 0.19
CTC1-203ENST00000578240 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
CTC1-203ENST00000578240 MYO5AQ9Y4I1 1855 aaKnown RBP16.22■□□□□ 0.19
CTC1-203ENST00000578240 TRAPPC3LQ5T215 181 aa16.22■□□□□ 0.19
CTC1-203ENST00000578240 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
CTC1-203ENST00000578240 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
CTC1-203ENST00000578240 MYH7P12883 1935 aa16.21■□□□□ 0.19
CTC1-203ENST00000578240 ZPR1O75312 459 aa16.21■□□□□ 0.19
CTC1-203ENST00000578240 GYS1P13807 737 aa16.21■□□□□ 0.19
CTC1-203ENST00000578240 ATG9AQ7Z3C6 839 aa16.21■□□□□ 0.19
CTC1-203ENST00000578240 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
CTC1-203ENST00000578240 GREM2Q9H772 168 aa16.21■□□□□ 0.19
CTC1-203ENST00000578240 ZNF609O15014 1411 aa16.21■□□□□ 0.19
CTC1-203ENST00000578240 PDE8AO60658 829 aa16.21■□□□□ 0.18
CTC1-203ENST00000578240 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.18
CTC1-203ENST00000578240 RFC4P35249 363 aa16.21■□□□□ 0.18
CTC1-203ENST00000578240 HSP90AB4PQ58FF6 505 aa16.21■□□□□ 0.18
CTC1-203ENST00000578240 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.18
CTC1-203ENST00000578240 BICDL1Q6ZP65 573 aa16.21■□□□□ 0.18
CTC1-203ENST00000578240 CCDC85AQ96PX6 553 aaPredicted RBP16.21■□□□□ 0.18
CTC1-203ENST00000578240 BCL11AQ9H165 835 aa16.21■□□□□ 0.18
CTC1-203ENST00000578240 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.18
CTC1-203ENST00000578240 PDE1AP54750 535 aa16.2■□□□□ 0.18
CTC1-203ENST00000578240 BMP2KLQ5H9B9 411 aa16.2■□□□□ 0.18
CTC1-203ENST00000578240 TTC22Q5TAA0 569 aa16.2■□□□□ 0.18
CTC1-203ENST00000578240 C3orf67Q6ZVT6 689 aa16.2■□□□□ 0.18
CTC1-203ENST00000578240 OSBPL3Q9H4L5 887 aa16.2■□□□□ 0.18
CTC1-203ENST00000578240 MYH13Q9UKX3 1938 aa16.19■□□□□ 0.18
CTC1-203ENST00000578240 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
CTC1-203ENST00000578240 RTL9Q8NET4 1388 aa16.19■□□□□ 0.18
CTC1-203ENST00000578240 NFIXQ14938 502 aa16.19■□□□□ 0.18
CTC1-203ENST00000578240 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
CTC1-203ENST00000578240 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
CTC1-203ENST00000578240 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
CTC1-203ENST00000578240 MX1P20591 662 aa16.18■□□□□ 0.18
CTC1-203ENST00000578240 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
CTC1-203ENST00000578240 SLC15A2Q16348 729 aa16.18■□□□□ 0.18
CTC1-203ENST00000578240 LRRC24Q50LG9 513 aa16.18■□□□□ 0.18
CTC1-203ENST00000578240 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
CTC1-203ENST00000578240 PUS3Q9BZE2 481 aaKnown RBP16.18■□□□□ 0.18
CTC1-203ENST00000578240 STAP2Q9UGK3 403 aa16.18■□□□□ 0.18
CTC1-203ENST00000578240 G3BP1Q13283 466 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTC1-203ENST00000578240 EAF2Q96CJ1 260 aaPredicted RBP16.18■□□□□ 0.18
CTC1-203ENST00000578240 TLR7Q9NYK1 1049 aaKnown RBP16.18■□□□□ 0.18
CTC1-203ENST00000578240 ITGA6P23229 1130 aa16.17■□□□□ 0.18
CTC1-203ENST00000578240 COL23A1Q86Y22 540 aaPredicted RBP16.17■□□□□ 0.18
CTC1-203ENST00000578240 PI4K2BQ8TCG2 481 aa16.17■□□□□ 0.18
CTC1-203ENST00000578240 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
CTC1-203ENST00000578240 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
CTC1-203ENST00000578240 EYA2O00167 538 aa16.16■□□□□ 0.18
CTC1-203ENST00000578240 CIAO1O76071 339 aa16.16■□□□□ 0.18
CTC1-203ENST00000578240 TFCP2Q12800 502 aa16.16■□□□□ 0.18
CTC1-203ENST00000578240 SETDB2Q96T68 719 aa16.16■□□□□ 0.18
CTC1-203ENST00000578240 AOX1Q06278 1338 aa16.16■□□□□ 0.18
CTC1-203ENST00000578240 LTBP1Q14766 1721 aa16.15■□□□□ 0.18
CTC1-203ENST00000578240 DDR1Q08345 913 aa16.15■□□□□ 0.18
CTC1-203ENST00000578240 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
CTC1-203ENST00000578240 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
CTC1-203ENST00000578240 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
CTC1-203ENST00000578240 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
CTC1-203ENST00000578240 TM4SF1P30408 202 aa16.14■□□□□ 0.18
CTC1-203ENST00000578240 IFIT5Q13325 482 aaKnown RBP16.14■□□□□ 0.18
CTC1-203ENST00000578240 SLC10A5Q5PT55 438 aa16.14■□□□□ 0.18
CTC1-203ENST00000578240 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.18
CTC1-203ENST00000578240 SEC24BO95487 1268 aa16.14■□□□□ 0.17
CTC1-203ENST00000578240 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
CTC1-203ENST00000578240 AACSQ86V21 672 aa16.14■□□□□ 0.17
CTC1-203ENST00000578240 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
CTC1-203ENST00000578240 CLASRPQ8N2M8 674 aaKnown RBP16.14■□□□□ 0.17
CTC1-203ENST00000578240 CCDC24Q8N4L8 307 aa16.14■□□□□ 0.17
CTC1-203ENST00000578240 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
CTC1-203ENST00000578240 FPGT-TNNI3KV9GXZ4 949 aa16.14■□□□□ 0.17
CTC1-203ENST00000578240 IL15P40933 162 aaPredicted RBP16.13■□□□□ 0.17
CTC1-203ENST00000578240 VGLL2Q8N8G2 317 aa16.13■□□□□ 0.17
CTC1-203ENST00000578240 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
CTC1-203ENST00000578240 DBNLQ9UJU6 430 aaKnown RBP16.13■□□□□ 0.17
CTC1-203ENST00000578240 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
CTC1-203ENST00000578240 RIPOR2Q9Y4F9 1068 aa16.13■□□□□ 0.17
CTC1-203ENST00000578240 KIF13BQ9NQT8 1826 aa16.13■□□□□ 0.17
CTC1-203ENST00000578240 ANKRD18BA2A2Z9 1011 aa16.12■□□□□ 0.17
CTC1-203ENST00000578240 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
CTC1-203ENST00000578240 SF3B3Q15393 1217 aaKnown RBP16.12■□□□□ 0.17
CTC1-203ENST00000578240 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
CTC1-203ENST00000578240 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
CTC1-203ENST00000578240 SDSP20132 328 aa16.11■□□□□ 0.17
CTC1-203ENST00000578240 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
CTC1-203ENST00000578240 CCDC8Q9H0W5 538 aaPredicted RBP16.11■□□□□ 0.17
CTC1-203ENST00000578240 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
CTC1-203ENST00000578240 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms