RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	SF3B3	Q15393	1217 aa	Known RBP	13.99	□□□□□ -0.17
PPP4R1-208	ENST00000578178	RRAGC	Q9HB90	399 aa		13.99	□□□□□ -0.17
PPP4R1-208	ENST00000578178	COL4A1	P02462	1669 aa		13.98	□□□□□ -0.17
PPP4R1-208	ENST00000578178	CDHR2	Q9BYE9	1310 aa		13.98	□□□□□ -0.17
PPP4R1-208	ENST00000578178	DUOX1	Q9NRD9	1551 aa		13.98	□□□□□ -0.17
PPP4R1-208	ENST00000578178	IGKV5-2	P06315	115 aa		13.98	□□□□□ -0.17
PPP4R1-208	ENST00000578178	TMC4	Q7Z404	712 aa		13.98	□□□□□ -0.17
PPP4R1-208	ENST00000578178	RBM46	Q8TBY0	533 aa	Known RBP	13.98	□□□□□ -0.17
PPP4R1-208	ENST00000578178	SCN4A	P35499	1836 aa		13.97	□□□□□ -0.17
PPP4R1-208	ENST00000578178	NEURL1B	A8MQ27	555 aa		13.97	□□□□□ -0.17
PPP4R1-208	ENST00000578178		E9PSI1	815 aa		13.97	□□□□□ -0.17
PPP4R1-208	ENST00000578178	VEGFA	P15692	232 aa	Predicted RBP	13.97	□□□□□ -0.17
PPP4R1-208	ENST00000578178	SP8	Q8IXZ3	490 aa		13.97	□□□□□ -0.17
PPP4R1-208	ENST00000578178	DNAAF4	Q8WXU2	420 aa		13.97	□□□□□ -0.17
PPP4R1-208	ENST00000578178	LTBP1	Q14766	1721 aa		13.97	□□□□□ -0.17
PPP4R1-208	ENST00000578178	ZNF541	Q9H0D2	1346 aa		13.96	□□□□□ -0.17
PPP4R1-208	ENST00000578178	PDE8A	O60658	829 aa		13.96	□□□□□ -0.17
PPP4R1-208	ENST00000578178	CWF19L2	Q2TBE0	894 aa	Known RBP	13.96	□□□□□ -0.17
PPP4R1-208	ENST00000578178	JDP2	Q8WYK2	163 aa		13.96	□□□□□ -0.17
PPP4R1-208	ENST00000578178	CELF1	Q92879	486 aa	Known RBP	13.96	□□□□□ -0.17
PPP4R1-208	ENST00000578178	FZD9	O00144	591 aa		13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	DDN	O94850	711 aa	Predicted RBP	13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	HSPA6	P17066	643 aa		13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	CCDC152	Q4G0S7	254 aa		13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	DPP8	Q6V1X1	898 aa	Predicted RBP	13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	LARGE2	Q8N3Y3	721 aa		13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	SUPT20H	Q8NEM7	779 aa		13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	JARID2	Q92833	1246 aa	Predicted RBP	13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.95	□□□□□ -0.18
PPP4R1-208	ENST00000578178	POTEC	B2RU33	542 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	PPIP5K2	O43314	1243 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	CTSW	P56202	376 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	FSTL1	Q12841	308 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	DIEXF	Q68CQ4	756 aa	Known RBP	13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	MPND	Q8N594	471 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	LINS1	Q8NG48	757 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	VPS33B	Q9H267	617 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	SPEF2	Q9C093	1822 aa		13.94	□□□□□ -0.18
PPP4R1-208	ENST00000578178	IQCA1L	A6NCM1	817 aa		13.93	□□□□□ -0.18
PPP4R1-208	ENST00000578178	SLFN5	Q08AF3	891 aa		13.93	□□□□□ -0.18
PPP4R1-208	ENST00000578178	GCKR	Q14397	625 aa		13.93	□□□□□ -0.18
PPP4R1-208	ENST00000578178	AOC3	Q16853	763 aa		13.93	□□□□□ -0.18
PPP4R1-208	ENST00000578178	UBE3B	Q7Z3V4	1068 aa		13.93	□□□□□ -0.18
PPP4R1-208	ENST00000578178	NIM1K	Q8IY84	436 aa		13.93	□□□□□ -0.18
PPP4R1-208	ENST00000578178	SMC1B	Q8NDV3	1235 aa		13.93	□□□□□ -0.18
PPP4R1-208	ENST00000578178		F6X3S4	739 aa		13.92	□□□□□ -0.18
PPP4R1-208	ENST00000578178	EIF6	P56537	245 aa	Known RBP	13.92	□□□□□ -0.18
PPP4R1-208	ENST00000578178	RPS8	P62241	208 aa	Known RBP	13.92	□□□□□ -0.18
PPP4R1-208	ENST00000578178	GPC2	Q8N158	579 aa		13.92	□□□□□ -0.18
PPP4R1-208	ENST00000578178	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.92	□□□□□ -0.18
PPP4R1-208	ENST00000578178	SEC31B	Q9NQW1	1179 aa		13.92	□□□□□ -0.18
PPP4R1-208	ENST00000578178	RTL9	Q8NET4	1388 aa		13.92	□□□□□ -0.18
PPP4R1-208	ENST00000578178		H7C1W4	665 aa		13.91	□□□□□ -0.18
PPP4R1-208	ENST00000578178	KIAA2012	Q0VF49	1180 aa		13.91	□□□□□ -0.18
PPP4R1-208	ENST00000578178	BEND3	Q5T5X7	828 aa		13.9	□□□□□ -0.18
PPP4R1-208	ENST00000578178	TTLL11	Q8NHH1	800 aa		13.9	□□□□□ -0.18
PPP4R1-208	ENST00000578178	CDCA7L	Q96GN5	454 aa		13.9	□□□□□ -0.18
PPP4R1-208	ENST00000578178	CDC5L	Q99459	802 aa	Known RBP	13.9	□□□□□ -0.18
PPP4R1-208	ENST00000578178	PLA2G12B	Q9BX93	195 aa		13.9	□□□□□ -0.18
PPP4R1-208	ENST00000578178	ADAMTSL1	Q8N6G6	1762 aa		13.9	□□□□□ -0.18
PPP4R1-208	ENST00000578178	CASP7	P55210	303 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	GPSM2	P81274	684 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	ANKRD18A	Q8IVF6	992 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	MIER1	Q8N108	512 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	GREM2	Q9H772	168 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	HACL1	Q9UJ83	578 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	ZNRF3	Q9ULT6	936 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	GJA3	Q9Y6H8	435 aa		13.89	□□□□□ -0.19
PPP4R1-208	ENST00000578178	APLP1	P51693	650 aa		13.88	□□□□□ -0.19
PPP4R1-208	ENST00000578178	TRMT2A	Q8IZ69	625 aa	Known RBP	13.88	□□□□□ -0.19
PPP4R1-208	ENST00000578178	MRPL50	Q8N5N7	158 aa	Known RBP	13.88	□□□□□ -0.19
PPP4R1-208	ENST00000578178	PODXL2	Q9NZ53	605 aa		13.88	□□□□□ -0.19
PPP4R1-208	ENST00000578178	PTPRC	P08575	1304 aa		13.88	□□□□□ -0.19
PPP4R1-208	ENST00000578178	C6orf229	H3BNL8	230 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	ALDH1L1	O75891	902 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	EPHX2	P34913	555 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	WASHC4	Q2M389	1173 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	FAM161A	Q3B820	660 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	SLC4A10	Q6U841	1118 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	TBC1D16	Q8TBP0	767 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	SSH1	Q8WYL5	1049 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	EYA3	Q99504	573 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	POLL	Q9UGP5	575 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	XDH	P47989	1333 aa		13.87	□□□□□ -0.19
PPP4R1-208	ENST00000578178	GRM8	O00222	908 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	UFL1	O94874	794 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	CT47B1	P0C2W7	299 aa	Predicted RBP	13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	POTEI	P0CG38	1075 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	POTEJ	P0CG39	1038 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	LMOD1	P29536	600 aa	Predicted RBP	13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	SCNN1D	P51172	638 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	ALDH1L2	Q3SY69	923 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	CHADL	Q6NUI6	762 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	LDHD	Q86WU2	507 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	BCL2L13	Q9BXK5	485 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	SRCIN1	Q9C0H9	1055 aa		13.86	□□□□□ -0.19
PPP4R1-208	ENST00000578178	ANKIB1	Q9P2G1	1089 aa		13.86	□□□□□ -0.19

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