RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 RLBP1P12271 317 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 TRIM27P14373 513 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 TIE1P35590 1138 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 XPCQ01831 940 aaPredicted RBP8.34□□□□□ -1.08
KRT39-203ENST00000578078 ESCO1Q5FWF5 840 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.08
KRT39-203ENST00000578078 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.08
KRT39-203ENST00000578078 THUMPD2Q9BTF0 503 aaKnown RBP8.34□□□□□ -1.08
KRT39-203ENST00000578078 MBIPQ9NS73 344 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 SPTLC3Q9NUV7 552 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 CGNQ9P2M7 1197 aaKnown RBP8.34□□□□□ -1.08
KRT39-203ENST00000578078 BIN2Q9UBW5 565 aaPredicted RBP8.34□□□□□ -1.08
KRT39-203ENST00000578078 DDX19BQ9UMR2 479 aa8.34□□□□□ -1.08
KRT39-203ENST00000578078 IGSF1Q8N6C5 1336 aa8.33□□□□□ -1.08
KRT39-203ENST00000578078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.33□□□□□ -1.08
KRT39-203ENST00000578078 CTIFO43310 598 aaKnown RBP8.33□□□□□ -1.08
KRT39-203ENST00000578078 TPM3P06753 285 aa8.33□□□□□ -1.08
KRT39-203ENST00000578078 PSME1Q06323 249 aa8.33□□□□□ -1.08
KRT39-203ENST00000578078 FKBP5Q13451 457 aaPredicted RBP8.33□□□□□ -1.08
KRT39-203ENST00000578078 TYW1BQ6NUM6 668 aa8.33□□□□□ -1.08
KRT39-203ENST00000578078 CERS3Q8IU89 383 aa8.33□□□□□ -1.08
KRT39-203ENST00000578078 SULF1Q8IWU6 871 aa8.33□□□□□ -1.08
KRT39-203ENST00000578078 FAM184AQ8NB25 1140 aa8.33□□□□□ -1.08
KRT39-203ENST00000578078 RWDD1Q9H446 243 aaPredicted RBP8.33□□□□□ -1.08
KRT39-203ENST00000578078 NOB1Q9ULX3 412 aaKnown RBP8.33□□□□□ -1.08
KRT39-203ENST00000578078 TRPM3Q9HCF6 1732 aaPredicted RBP8.33□□□□□ -1.08
KRT39-203ENST00000578078 NFAT5O94916 1531 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 NUCB2P80303 420 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 CBX1P83916 185 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 CHAF1AQ13111 956 aaPredicted RBP8.32□□□□□ -1.08
KRT39-203ENST00000578078 UVSSAQ2YD98 709 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 TWISTNBQ3B726 338 aaPredicted RBP8.32□□□□□ -1.08
KRT39-203ENST00000578078 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 ZNF771Q7L3S4 317 aaPredicted RBP8.32□□□□□ -1.08
KRT39-203ENST00000578078 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 SKAP1Q86WV1 359 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 ITPRIPQ8IWB1 547 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 CEP120Q8N960 986 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 GAS2L2Q8NHY3 880 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 CLP1Q92989 425 aaKnown RBP8.32□□□□□ -1.08
KRT39-203ENST00000578078 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
KRT39-203ENST00000578078 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 TNNQ9UQP3 1299 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
KRT39-203ENST00000578078 FAM83GA6ND36 823 aa8.31□□□□□ -1.08
KRT39-203ENST00000578078 VAMP4O75379 141 aa8.31□□□□□ -1.08
KRT39-203ENST00000578078 IGHDP01880 384 aa8.31□□□□□ -1.08
KRT39-203ENST00000578078 HOXC9P31274 260 aa8.31□□□□□ -1.08
KRT39-203ENST00000578078 RTF1Q92541 710 aaKnown RBP8.31□□□□□ -1.08
KRT39-203ENST00000578078 ARHGAP45Q92619 1136 aa8.31□□□□□ -1.08
KRT39-203ENST00000578078 DDX49Q9Y6V7 483 aaKnown RBP8.31□□□□□ -1.08
KRT39-203ENST00000578078 ATP2B3Q16720 1220 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 KCNH5Q8NCM2 988 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 EYA1Q99502 592 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 STRCP1A6NGW2 1772 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 SLIT3O75094 1523 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
KRT39-203ENST00000578078 ERCC5P28715 1186 aaPredicted RBP8.3□□□□□ -1.08
KRT39-203ENST00000578078 TAGLNQ01995 201 aaKnown RBP8.3□□□□□ -1.08
KRT39-203ENST00000578078 DCTN1Q14203 1278 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 LRSAM1Q6UWE0 723 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
KRT39-203ENST00000578078 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 BRMS1Q9HCU9 246 aa8.3□□□□□ -1.08
KRT39-203ENST00000578078 MORC2Q9Y6X9 1032 aaPredicted RBP8.3□□□□□ -1.08
KRT39-203ENST00000578078 CACNA1FO60840 1977 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 RGPD2P0DJD1 1756 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 CHL1O00533 1208 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 HTATSF1O43719 755 aaKnown RBP8.29□□□□□ -1.08
KRT39-203ENST00000578078 KDM4AO75164 1064 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 MBD3O95983 291 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 SLFN14P0C7P3 912 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 TMEM92Q6UXU6 159 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 MCM10Q7L590 875 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 TMEM57Q8N5G2 664 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 NFATC2IPQ8NCF5 419 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
KRT39-203ENST00000578078 EPS8L1Q8TE68 723 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
KRT39-203ENST00000578078 DCCP43146 1447 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 CRB1P82279 1406 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 ALS2Q96Q42 1657 aa8.29□□□□□ -1.08
KRT39-203ENST00000578078 C1orf167Q5SNV9 1468 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 USP17L3A6NCW0 530 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 USP17L4A6NCW7 530 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 VGLL3A8MV65 326 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
KRT39-203ENST00000578078 KCNJ4P48050 445 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 TERF2Q15554 542 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 MTHFSDQ2M296 383 aaKnown RBP8.28□□□□□ -1.08
KRT39-203ENST00000578078 ZSCAN23Q3MJ62 389 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 ZNF662Q6ZS27 426 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 USP17L1Q7RTZ2 530 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 NOP9Q86U38 636 aaKnown RBP8.28□□□□□ -1.08
KRT39-203ENST00000578078 TSPYL6Q8N831 410 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms