RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 LTBP1Q14766 1721 aa13.02□□□□□ -0.32
SUPT6H-204ENST00000577939 TCERG1O14776 1098 aaKnown RBP13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 DDNO94850 711 aaPredicted RBP13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 SF3B3Q15393 1217 aaKnown RBP13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 CCDC152Q4G0S7 254 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 SP8Q8IXZ3 490 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 MPNDQ8N594 471 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 FAM89AQ96GI7 184 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 METTL22Q9BUU2 404 aaPredicted RBP13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 ADAMTSL1Q8N6G6 1762 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 PSME4Q14997 1843 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 TRPM7Q96QT4 1865 aa13.02□□□□□ -0.33
SUPT6H-204ENST00000577939 FZD9O00144 591 aa13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 LDHDQ86WU2 507 aa13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 TSPYL6Q8N831 410 aa13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 MAP3K2Q9Y2U5 619 aa13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
SUPT6H-204ENST00000577939 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
SUPT6H-204ENST00000577939 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
SUPT6H-204ENST00000577939 CHADLQ6NUI6 762 aa13□□□□□ -0.33
SUPT6H-204ENST00000577939 PNMA8AQ86V59 439 aaPredicted RBP13□□□□□ -0.33
SUPT6H-204ENST00000577939 COL4A5P29400 1685 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 PDE8AO60658 829 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 FLIIQ13045 1269 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 AOC3Q16853 763 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 EYA3Q99504 573 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
SUPT6H-204ENST00000577939 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
SUPT6H-204ENST00000577939 EPHX2P34913 555 aa12.98□□□□□ -0.33
SUPT6H-204ENST00000577939 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
SUPT6H-204ENST00000577939 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
SUPT6H-204ENST00000577939 CDC5LQ99459 802 aaKnown RBP12.98□□□□□ -0.33
SUPT6H-204ENST00000577939 TNIP1Q15025 636 aa12.97□□□□□ -0.33
SUPT6H-204ENST00000577939 ZNF428Q96B54 188 aa12.97□□□□□ -0.33
SUPT6H-204ENST00000577939 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
SUPT6H-204ENST00000577939 A0A1B0GUL6 1792 aa12.97□□□□□ -0.33
SUPT6H-204ENST00000577939 POTECB2RU33 542 aa12.96□□□□□ -0.33
SUPT6H-204ENST00000577939 CTSWP56202 376 aa12.96□□□□□ -0.33
SUPT6H-204ENST00000577939 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.33
SUPT6H-204ENST00000577939 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.33
SUPT6H-204ENST00000577939 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.33
SUPT6H-204ENST00000577939 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.33
SUPT6H-204ENST00000577939 RTL9Q8NET4 1388 aa12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 NEURL1BA8MQ27 555 aa12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 RPS8P62241 208 aaKnown RBP12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 CELF1Q92879 486 aaKnown RBP12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 ANKIB1Q9P2G1 1089 aa12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
SUPT6H-204ENST00000577939 PCNTO95613 3336 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 G3V3G9 751 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 WASHC4Q2M389 1173 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
SUPT6H-204ENST00000577939 XDHP47989 1333 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 COL4A1P02462 1669 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 SCN9AQ15858 1988 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 E9PSI1 815 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 CCER2I3L3R5 266 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 VAMP4O75379 141 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 UFL1O94874 794 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 CWF19L2Q2TBE0 894 aaKnown RBP12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
SUPT6H-204ENST00000577939 IGHMBP2P38935 993 aaKnown RBP12.92□□□□□ -0.34
SUPT6H-204ENST00000577939 SCNN1DP51172 638 aa12.92□□□□□ -0.34
SUPT6H-204ENST00000577939 GCKRQ14397 625 aa12.92□□□□□ -0.34
SUPT6H-204ENST00000577939 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
SUPT6H-204ENST00000577939 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
SUPT6H-204ENST00000577939 PODXL2Q9NZ53 605 aa12.92□□□□□ -0.34
SUPT6H-204ENST00000577939 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 RPS12P25398 132 aaKnown RBP12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 GPSM2P81274 684 aa12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 CXCL9Q07325 125 aa12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 G2E3Q7L622 706 aa12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 SEC31BQ9NQW1 1179 aa12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
SUPT6H-204ENST00000577939 ECE2O60344 883 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 RAD17O75943 681 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms