RNA–Protein interactions for RNA: ENST00000577926.1

CACNB1-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 427 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-208ENST00000577926 SF3B3Q15393 1217 aaKnown RBP13.34□□□□□ -0.27
CACNB1-208ENST00000577926 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
CACNB1-208ENST00000577926 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
CACNB1-208ENST00000577926 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
CACNB1-208ENST00000577926 PDE8AO60658 829 aa13.33□□□□□ -0.28
CACNB1-208ENST00000577926 BBOX1O75936 387 aa13.33□□□□□ -0.28
CACNB1-208ENST00000577926 GCKRQ14397 625 aa13.33□□□□□ -0.28
CACNB1-208ENST00000577926 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
CACNB1-208ENST00000577926 TRMT2AQ8IZ69 625 aaKnown RBP13.33□□□□□ -0.28
CACNB1-208ENST00000577926 CCDC85AQ96PX6 553 aaPredicted RBP13.33□□□□□ -0.28
CACNB1-208ENST00000577926 PSMD1Q99460 953 aa13.33□□□□□ -0.28
CACNB1-208ENST00000577926 BCL2L13Q9BXK5 485 aa13.33□□□□□ -0.28
CACNB1-208ENST00000577926 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
CACNB1-208ENST00000577926 CCDC152Q4G0S7 254 aa13.32□□□□□ -0.28
CACNB1-208ENST00000577926 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
CACNB1-208ENST00000577926 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
CACNB1-208ENST00000577926 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
CACNB1-208ENST00000577926 SSH1Q8WYL5 1049 aa13.32□□□□□ -0.28
CACNB1-208ENST00000577926 CELF1Q92879 486 aaKnown RBP13.32□□□□□ -0.28
CACNB1-208ENST00000577926 NMRK2Q9NPI5 230 aa13.32□□□□□ -0.28
CACNB1-208ENST00000577926 LTBP1Q14766 1721 aa13.32□□□□□ -0.28
CACNB1-208ENST00000577926 DUOX1Q9NRD9 1551 aa13.32□□□□□ -0.28
CACNB1-208ENST00000577926 WDR90Q96KV7 1748 aa13.31□□□□□ -0.28
CACNB1-208ENST00000577926 CTSWP56202 376 aa13.31□□□□□ -0.28
CACNB1-208ENST00000577926 BEND3Q5T5X7 828 aa13.31□□□□□ -0.28
CACNB1-208ENST00000577926 SLC4A10Q6U841 1118 aa13.31□□□□□ -0.28
CACNB1-208ENST00000577926 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
CACNB1-208ENST00000577926 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
CACNB1-208ENST00000577926 COL4A5P29400 1685 aa13.31□□□□□ -0.28
CACNB1-208ENST00000577926 GLTPD2A6NH11 291 aa13.3□□□□□ -0.28
CACNB1-208ENST00000577926 H7C1W4 665 aa13.3□□□□□ -0.28
CACNB1-208ENST00000577926 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
CACNB1-208ENST00000577926 ALDH1L2Q3SY69 923 aa13.3□□□□□ -0.28
CACNB1-208ENST00000577926 DPP8Q6V1X1 898 aaPredicted RBP13.3□□□□□ -0.28
CACNB1-208ENST00000577926 SEC31BQ9NQW1 1179 aa13.3□□□□□ -0.28
CACNB1-208ENST00000577926 PTPRCP08575 1304 aa13.3□□□□□ -0.28
CACNB1-208ENST00000577926 KIF3CO14782 793 aa13.29□□□□□ -0.28
CACNB1-208ENST00000577926 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
CACNB1-208ENST00000577926 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
CACNB1-208ENST00000577926 MPNDQ8N594 471 aa13.29□□□□□ -0.28
CACNB1-208ENST00000577926 SUPT20HQ8NEM7 779 aa13.29□□□□□ -0.28
CACNB1-208ENST00000577926 SRCIN1Q9C0H9 1055 aa13.29□□□□□ -0.28
CACNB1-208ENST00000577926 PPIP5K2O43314 1243 aa13.28□□□□□ -0.28
CACNB1-208ENST00000577926 CASP7P55210 303 aa13.28□□□□□ -0.28
CACNB1-208ENST00000577926 C1QTNF8P60827 252 aa13.28□□□□□ -0.28
CACNB1-208ENST00000577926 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
CACNB1-208ENST00000577926 JDP2Q8WYK2 163 aa13.28□□□□□ -0.28
CACNB1-208ENST00000577926 RRAGCQ9HB90 399 aa13.28□□□□□ -0.28
CACNB1-208ENST00000577926 ZNF541Q9H0D2 1346 aa13.28□□□□□ -0.28
CACNB1-208ENST00000577926 RTL9Q8NET4 1388 aa13.28□□□□□ -0.28
CACNB1-208ENST00000577926 SCN4AP35499 1836 aa13.27□□□□□ -0.28
CACNB1-208ENST00000577926 ALDH1L1O75891 902 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 AOC3Q16853 763 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
CACNB1-208ENST00000577926 TTLL11Q8NHH1 800 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
CACNB1-208ENST00000577926 PLA2G12BQ9BX93 195 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
CACNB1-208ENST00000577926 GREM2Q9H772 168 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.29
CACNB1-208ENST00000577926 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 A0A1B0GUL6 1792 aa13.27□□□□□ -0.29
CACNB1-208ENST00000577926 GRM8O00222 908 aa13.26□□□□□ -0.29
CACNB1-208ENST00000577926 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
CACNB1-208ENST00000577926 NIM1KQ8IY84 436 aa13.26□□□□□ -0.29
CACNB1-208ENST00000577926 NSFL1CQ9UNZ2 370 aaKnown RBP13.26□□□□□ -0.29
CACNB1-208ENST00000577926 FZD9O00144 591 aa13.25□□□□□ -0.29
CACNB1-208ENST00000577926 DDNO94850 711 aaPredicted RBP13.25□□□□□ -0.29
CACNB1-208ENST00000577926 RARSP54136 660 aaKnown RBP13.25□□□□□ -0.29
CACNB1-208ENST00000577926 GPSM2P81274 684 aa13.25□□□□□ -0.29
CACNB1-208ENST00000577926 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
CACNB1-208ENST00000577926 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
CACNB1-208ENST00000577926 VEGFAP15692 232 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-208ENST00000577926 ITGA6P23229 1130 aa13.24□□□□□ -0.29
CACNB1-208ENST00000577926 IGHMBP2P38935 993 aaKnown RBP13.24□□□□□ -0.29
CACNB1-208ENST00000577926 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
CACNB1-208ENST00000577926 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
CACNB1-208ENST00000577926 VPS33BQ9H267 617 aa13.24□□□□□ -0.29
CACNB1-208ENST00000577926 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
CACNB1-208ENST00000577926 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
CACNB1-208ENST00000577926 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
CACNB1-208ENST00000577926 TOMM70O94826 608 aa13.23□□□□□ -0.29
CACNB1-208ENST00000577926 UFL1O94874 794 aa13.23□□□□□ -0.29
CACNB1-208ENST00000577926 CSF1RP07333 972 aa13.23□□□□□ -0.29
CACNB1-208ENST00000577926 EYA3Q99504 573 aa13.23□□□□□ -0.29
CACNB1-208ENST00000577926 GJA3Q9Y6H8 435 aa13.23□□□□□ -0.29
CACNB1-208ENST00000577926 XDHP47989 1333 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 POTECB2RU33 542 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
CACNB1-208ENST00000577926 FOXO4P98177 505 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 IFIT5Q13325 482 aaKnown RBP13.22□□□□□ -0.29
CACNB1-208ENST00000577926 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 GPC2Q8N158 579 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
CACNB1-208ENST00000577926 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
CACNB1-208ENST00000577926 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
CACNB1-208ENST00000577926 GPR101Q96P66 508 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms