RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 LBX1P52954 281 aa20.77■□□□□ 0.92
VAPA-204ENST00000577901 FMR1Q06787 632 aaKnown RBP eCLIP20.77■□□□□ 0.929e-12■■■□□ 14.6
VAPA-204ENST00000577901 DPP8Q6V1X1 898 aaPredicted RBP20.77■□□□□ 0.92
VAPA-204ENST00000577901 SP8Q8IXZ3 490 aa20.77■□□□□ 0.92
VAPA-204ENST00000577901 GPRC5DQ9NZD1 345 aa20.77■□□□□ 0.92
VAPA-204ENST00000577901 MAP2K1Q02750 393 aaPredicted RBP20.76■□□□□ 0.91
VAPA-204ENST00000577901 CXCL9Q07325 125 aa20.76■□□□□ 0.91
VAPA-204ENST00000577901 TCIRG1Q13488 830 aa20.76■□□□□ 0.91
VAPA-204ENST00000577901 FAM9BQ8IZU0 186 aa20.76■□□□□ 0.91
VAPA-204ENST00000577901 CFAP44Q96MT7 982 aa20.76■□□□□ 0.91
VAPA-204ENST00000577901 ADARB2Q9NS39 739 aaKnown RBP20.76■□□□□ 0.91
VAPA-204ENST00000577901 TRMT112Q9UI30 125 aaKnown RBP20.76■□□□□ 0.91
VAPA-204ENST00000577901 TRAF5O00463 557 aa20.75■□□□□ 0.91
VAPA-204ENST00000577901 DDX46Q7L014 1031 aaKnown RBP20.75■□□□□ 0.91
VAPA-204ENST00000577901 MPNDQ8N594 471 aa20.75■□□□□ 0.91
VAPA-204ENST00000577901 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
VAPA-204ENST00000577901 ANKRD36CQ5JPF3 1778 aa20.74■□□□□ 0.91
VAPA-204ENST00000577901 KRT24Q2M2I5 525 aa20.74■□□□□ 0.91
VAPA-204ENST00000577901 CST9Q5W186 159 aa20.74■□□□□ 0.91
VAPA-204ENST00000577901 LAMB2P55268 1798 aa20.73■□□□□ 0.91
VAPA-204ENST00000577901 HSPA8P11142 646 aaKnown RBP20.73■□□□□ 0.91
VAPA-204ENST00000577901 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
VAPA-204ENST00000577901 GNAI1P63096 354 aa20.73■□□□□ 0.91
VAPA-204ENST00000577901 KIAA2012Q0VF49 1180 aa20.73■□□□□ 0.91
VAPA-204ENST00000577901 GRAPQ13588 217 aa20.73■□□□□ 0.91
VAPA-204ENST00000577901 CCDC27Q2M243 656 aa20.73■□□□□ 0.91
VAPA-204ENST00000577901 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
VAPA-204ENST00000577901 PAXIP1Q6ZW49 1069 aaPredicted RBP20.73■□□□□ 0.91
VAPA-204ENST00000577901 GRAPLQ8TC17 118 aaPredicted RBP20.73■□□□□ 0.91
VAPA-204ENST00000577901 CAPNS2Q96L46 248 aa20.73■□□□□ 0.91
VAPA-204ENST00000577901 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
VAPA-204ENST00000577901 ECE1P42892 770 aa20.72■□□□□ 0.91
VAPA-204ENST00000577901 CIAPIN1Q6FI81 312 aa20.72■□□□□ 0.91
VAPA-204ENST00000577901 CHPF2Q9P2E5 772 aa20.72■□□□□ 0.91
VAPA-204ENST00000577901 GRM1Q13255 1194 aa20.71■□□□□ 0.91
VAPA-204ENST00000577901 CYP4F22Q6NT55 531 aa20.71■□□□□ 0.91
VAPA-204ENST00000577901 TLL2Q9Y6L7 1015 aa20.71■□□□□ 0.91
VAPA-204ENST00000577901 RAD17O75943 681 aa20.7■□□□□ 0.9
VAPA-204ENST00000577901 ZNF853P0CG23 659 aa20.7■□□□□ 0.9
VAPA-204ENST00000577901 TNIP1Q15025 636 aa20.7■□□□□ 0.9
VAPA-204ENST00000577901 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
VAPA-204ENST00000577901 BCL2L13Q9BXK5 485 aa20.7■□□□□ 0.9
VAPA-204ENST00000577901 CDHR2Q9BYE9 1310 aa20.7■□□□□ 0.9
VAPA-204ENST00000577901 THSD7BQ9C0I4 1608 aa20.69■□□□□ 0.9
VAPA-204ENST00000577901 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
VAPA-204ENST00000577901 TMC4Q7Z404 712 aa20.69■□□□□ 0.9
VAPA-204ENST00000577901 WWC1Q8IX03 1113 aa20.69■□□□□ 0.9
VAPA-204ENST00000577901 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
VAPA-204ENST00000577901 GPR101Q96P66 508 aaPredicted RBP20.69■□□□□ 0.9
VAPA-204ENST00000577901 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
VAPA-204ENST00000577901 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
VAPA-204ENST00000577901 PGAP2Q9UHJ9 254 aa20.68■□□□□ 0.9
VAPA-204ENST00000577901 TRPM7Q96QT4 1865 aa20.68■□□□□ 0.9
VAPA-204ENST00000577901 CCER2I3L3R5 266 aa20.67■□□□□ 0.9
VAPA-204ENST00000577901 CELF2O95319 508 aaKnown RBP20.67■□□□□ 0.9
VAPA-204ENST00000577901 HOXB7P09629 217 aa20.67■□□□□ 0.9
VAPA-204ENST00000577901 ANKRD13DQ6ZTN6 518 aa20.67■□□□□ 0.9
VAPA-204ENST00000577901 BEGAINQ9BUH8 593 aa20.67■□□□□ 0.9
VAPA-204ENST00000577901 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
VAPA-204ENST00000577901 DUOX1Q9NRD9 1551 aa20.67■□□□□ 0.9
VAPA-204ENST00000577901 YDJCA8MPS7 323 aa20.66■□□□□ 0.9
VAPA-204ENST00000577901 HIRAP54198 1017 aaPredicted RBP20.66■□□□□ 0.9
VAPA-204ENST00000577901 DIEXFQ68CQ4 756 aaKnown RBP20.66■□□□□ 0.9
VAPA-204ENST00000577901 ZC3H15Q8WU90 426 aaKnown RBP20.66■□□□□ 0.9
VAPA-204ENST00000577901 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
VAPA-204ENST00000577901 ISCA1Q9BUE6 129 aa20.66■□□□□ 0.9
VAPA-204ENST00000577901 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
VAPA-204ENST00000577901 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
VAPA-204ENST00000577901 ATP5J2-PTCD1G3V325 749 aa20.65■□□□□ 0.9
VAPA-204ENST00000577901 SAPCD2Q86UD0 394 aa20.65■□□□□ 0.9
VAPA-204ENST00000577901 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
VAPA-204ENST00000577901 LRRC37AA6NMS7 1700 aa20.64■□□□□ 0.9
VAPA-204ENST00000577901 DDX60Q8IY21 1712 aaKnown RBP20.64■□□□□ 0.9
VAPA-204ENST00000577901 H7C1D1 291 aa20.64■□□□□ 0.89
VAPA-204ENST00000577901 AOC2O75106 756 aa20.64■□□□□ 0.89
VAPA-204ENST00000577901 MAP2K2P36507 400 aa20.64■□□□□ 0.89
VAPA-204ENST00000577901 SF3B3Q15393 1217 aaKnown RBP20.64■□□□□ 0.89
VAPA-204ENST00000577901 WASHC4Q2M389 1173 aa20.64■□□□□ 0.89
VAPA-204ENST00000577901 DUSP27Q5VZP5 1158 aa20.64■□□□□ 0.89
VAPA-204ENST00000577901 CELF1Q92879 486 aaKnown RBP20.64■□□□□ 0.89
VAPA-204ENST00000577901 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
VAPA-204ENST00000577901 NSFL1CQ9UNZ2 370 aaKnown RBP20.64■□□□□ 0.89
VAPA-204ENST00000577901 TAF1P21675 1872 aa20.64■□□□□ 0.89
VAPA-204ENST00000577901 IL16Q14005 1332 aa20.63■□□□□ 0.89
VAPA-204ENST00000577901 SHTN1A0MZ66 631 aa20.63■□□□□ 0.89
VAPA-204ENST00000577901 CDC37L1Q7L3B6 337 aa20.63■□□□□ 0.89
VAPA-204ENST00000577901 WDR63Q8IWG1 891 aa20.63■□□□□ 0.89
VAPA-204ENST00000577901 ABHD8Q96I13 439 aa20.63■□□□□ 0.89
VAPA-204ENST00000577901 ZNF408Q9H9D4 720 aa20.63■□□□□ 0.89
VAPA-204ENST00000577901 RTL5Q5HYW3 569 aaPredicted RBP20.62■□□□□ 0.89
VAPA-204ENST00000577901 MICALL2Q8IY33 904 aa20.62■□□□□ 0.89
VAPA-204ENST00000577901 HHIPL1Q96JK4 782 aa20.62■□□□□ 0.89
VAPA-204ENST00000577901 CHMP4AQ9BY43 222 aa20.62■□□□□ 0.89
VAPA-204ENST00000577901 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
VAPA-204ENST00000577901 C6orf229H3BNL8 230 aa20.61■□□□□ 0.89
VAPA-204ENST00000577901 RIMBP2O15034 1052 aa20.61■□□□□ 0.89
VAPA-204ENST00000577901 GPSM2P81274 684 aa20.61■□□□□ 0.89
VAPA-204ENST00000577901 DBNDD1Q9H9R9 158 aa20.61■□□□□ 0.89
VAPA-204ENST00000577901 PSMD14O00487 310 aa20.6■□□□□ 0.89
VAPA-204ENST00000577901 IRS4O14654 1257 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms