RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
CDKN2A-211ENST00000577854 PPIP5K2O43314 1243 aa11.72□□□□□ -0.53
CDKN2A-211ENST00000577854 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
CDKN2A-211ENST00000577854 MPNDQ8N594 471 aa11.72□□□□□ -0.53
CDKN2A-211ENST00000577854 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
CDKN2A-211ENST00000577854 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
CDKN2A-211ENST00000577854 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
CDKN2A-211ENST00000577854 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 CTSWP56202 376 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 GCKRQ14397 625 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 TMC4Q7Z404 712 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 SUPT20HQ8NEM7 779 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 SSH1Q8WYL5 1049 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 PSMD1Q99460 953 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 SRCIN1Q9C0H9 1055 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 C9orf78Q9NZ63 289 aaPredicted RBP11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.53
CDKN2A-211ENST00000577854 CDHR2Q9BYE9 1310 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 RPS8P62241 208 aaKnown RBP11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 AOC3Q16853 763 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 NIM1KQ8IY84 436 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 CDC5LQ99459 802 aaKnown RBP11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 ANKIB1Q9P2G1 1089 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 GJA3Q9Y6H8 435 aa11.7□□□□□ -0.54
CDKN2A-211ENST00000577854 G3V3G9 751 aa11.69□□□□□ -0.54
CDKN2A-211ENST00000577854 DDNO94850 711 aaPredicted RBP11.69□□□□□ -0.54
CDKN2A-211ENST00000577854 EIF6P56537 245 aaKnown RBP11.69□□□□□ -0.54
CDKN2A-211ENST00000577854 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
CDKN2A-211ENST00000577854 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
CDKN2A-211ENST00000577854 PTPRCP08575 1304 aa11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 H7C1W4 665 aa11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 KIF3CO14782 793 aa11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 CT47B1P0C2W7 299 aaPredicted RBP11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 ALDH1L2Q3SY69 923 aa11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 GREM2Q9H772 168 aa11.68□□□□□ -0.54
CDKN2A-211ENST00000577854 ZNF541Q9H0D2 1346 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 TIAM2Q8IVF5 1701 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 GRM8O00222 908 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 ALDH1L1O75891 902 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 UFL1O94874 794 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 GPSM2P81274 684 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 FAM161AQ3B820 660 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 MPHOSPH8Q99549 860 aa11.67□□□□□ -0.54
CDKN2A-211ENST00000577854 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 TOMM70O94826 608 aa11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 ITGA6P23229 1130 aa11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 FRAT1Q92837 279 aaPredicted RBP11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 EYA3Q99504 573 aa11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 GGA1Q9UJY5 639 aa11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 NOB1Q9ULX3 412 aaKnown RBP11.66□□□□□ -0.54
CDKN2A-211ENST00000577854 LAMB2P55268 1798 aa11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 ANKRD18BA2A2Z9 1011 aa11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 IQCA1LA6NCM1 817 aa11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 LMOD1P29536 600 aaPredicted RBP11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 IFIT5Q13325 482 aaKnown RBP11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 EAPPQ56P03 285 aaPredicted RBP11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 GPR101Q96P66 508 aaPredicted RBP11.65□□□□□ -0.54
CDKN2A-211ENST00000577854 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 SBF1O95248 1867 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 RAD17O75943 681 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 KCNJ4P48050 445 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 LMBR1LQ6UX01 489 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 RTFDC1Q9BY42 306 aaPredicted RBP11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 ZC3H12CQ9C0D7 883 aaKnown RBP11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 DBNDD1Q9H9R9 158 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
CDKN2A-211ENST00000577854 XDHP47989 1333 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 ZBED9Q6R2W3 1325 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 SNED1Q8TER0 1413 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 FZD9O00144 591 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 CASP7P55210 303 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 GPC2Q8N158 579 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 SUCLG2Q96I99 432 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 VPS33BQ9H267 617 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms