RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 NBR1Q14596 966 aa9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 ZNF622Q969S3 477 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 PCGF6Q9BYE7 350 aa9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 C4AP0C0L4 1744 aa9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 SOS1Q07889 1333 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-212ENST00000577721 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 DPYSL4O14531 572 aa9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 RNMTO43148 476 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 HMOX1P09601 288 aa9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 HSPA5P11021 654 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 IL13P35225 146 aa9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 AAASQ9NRG9 546 aa9.3□□□□□ -0.92
SMARCE1-212ENST00000577721 NPHP1O15259 732 aa9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 ST8SIA5O15466 376 aa9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 STARD3NLO95772 234 aa9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 HSPA1AP0DMV8 641 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 HSPA1BP0DMV9 641 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 ZNF697Q5TEC3 545 aa9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 ZBTB1Q9Y2K1 713 aa9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 ZC3H4Q9UPT8 1303 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-212ENST00000577721 A0A087WZG4 1122 aa9.28□□□□□ -0.92
SMARCE1-212ENST00000577721 TNFRSF10AO00220 468 aa9.28□□□□□ -0.92
SMARCE1-212ENST00000577721 C21orf2O43822 256 aa9.28□□□□□ -0.92
SMARCE1-212ENST00000577721 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
SMARCE1-212ENST00000577721 PRELPP51888 382 aa9.28□□□□□ -0.92
SMARCE1-212ENST00000577721 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
SMARCE1-212ENST00000577721 TTC5Q8N0Z6 440 aa9.28□□□□□ -0.92
SMARCE1-212ENST00000577721 COL15A1P39059 1388 aa9.27□□□□□ -0.93
SMARCE1-212ENST00000577721 KIF13BQ9NQT8 1826 aa9.27□□□□□ -0.93
SMARCE1-212ENST00000577721 PDE6BP35913 854 aa9.27□□□□□ -0.93
SMARCE1-212ENST00000577721 MTHFSDQ2M296 383 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-212ENST00000577721 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
SMARCE1-212ENST00000577721 CCDC24Q8N4L8 307 aa9.27□□□□□ -0.93
SMARCE1-212ENST00000577721 KIAA1551Q9HCM1 1747 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 NFKBIEO00221 500 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 WIPF1O43516 503 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 TEFQ10587 303 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 CNGB1Q14028 1251 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 TBC1D9BQ66K14 1250 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 PRR14Q9BWN1 585 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
SMARCE1-212ENST00000577721 ANKRD26Q9UPS8 1709 aa9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 LOC100996750A0A140TA64 210 aa9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 DIAPH1O60610 1272 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 ANKLE1Q8NAG6 615 aa9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 BRIP1Q9BX63 1249 aa9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 TEX13AQ9BXU3 409 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 KRTAP4-6Q9BYQ5 205 aa9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 FAM198AQ9UFP1 575 aa9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-212ENST00000577721 ZNF831Q5JPB2 1677 aa9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 GDF9O60383 454 aa9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 DDNO94850 711 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 EIF5P55010 431 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 CAMK2BQ13554 666 aa9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 CC2D1BQ5T0F9 858 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 NUDT18Q6ZVK8 323 aa9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 WDR90Q96KV7 1748 aa9.24□□□□□ -0.93
SMARCE1-212ENST00000577721 COL5A3P25940 1745 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 A1BGP04217 495 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 ST5P78524 1137 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 PRR5LQ6MZQ0 368 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 CNBD1Q8NA66 436 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 ZNF496Q96IT1 587 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 TAOK3Q9H2K8 898 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 PCDHB3Q9Y5E6 796 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 CARMIL3Q8ND23 1372 aa9.23□□□□□ -0.93
SMARCE1-212ENST00000577721 GNAT3A8MTJ3 354 aa9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 IL6STP40189 918 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 AMER1Q5JTC6 1135 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 SOGA3Q5TF21 947 aa9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 ZNF790Q6PG37 636 aa9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 FMNL2Q96PY5 1086 aa9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 MYH14Q7Z406 1995 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 CLSPNQ9HAW4 1339 aa9.22□□□□□ -0.93
SMARCE1-212ENST00000577721 IQCA1LA6NCM1 817 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 GTPBP6O43824 516 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 EAPPQ56P03 285 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 STYK1Q6J9G0 422 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 PRPF40BQ6NWY9 871 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 IL17REQ8NFR9 667 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 GAS2L2Q8NHY3 880 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 AIDAQ96BJ3 306 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 MASTLQ96GX5 879 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 ARFGEF1Q9Y6D6 1849 aa9.21□□□□□ -0.94
SMARCE1-212ENST00000577721 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
SMARCE1-212ENST00000577721 NFX1Q12986 1120 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms