RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 PDE8AO60658 829 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 NPR1P16066 1061 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
NDE1-212ENST00000577101 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
NDE1-212ENST00000577101 TTLL11Q8NHH1 800 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 FRAT1Q92837 279 aaPredicted RBP12.42□□□□□ -0.42
NDE1-212ENST00000577101 CLUAP1Q96AJ1 413 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 NLRP3Q96P20 1036 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 PLA2G12BQ9BX93 195 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 API5Q9BZZ5 524 aaKnown RBP12.42□□□□□ -0.42
NDE1-212ENST00000577101 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
NDE1-212ENST00000577101 CSF1RP07333 972 aa12.41□□□□□ -0.42
NDE1-212ENST00000577101 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
NDE1-212ENST00000577101 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
NDE1-212ENST00000577101 TTLL6Q8N841 843 aa12.41□□□□□ -0.42
NDE1-212ENST00000577101 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
NDE1-212ENST00000577101 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
NDE1-212ENST00000577101 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
NDE1-212ENST00000577101 COL4A5P29400 1685 aa12.41□□□□□ -0.42
NDE1-212ENST00000577101 CTSWP56202 376 aa12.4□□□□□ -0.42
NDE1-212ENST00000577101 GPR162Q16538 588 aa12.4□□□□□ -0.42
NDE1-212ENST00000577101 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
NDE1-212ENST00000577101 C20orf194Q5TEA3 1177 aa12.4□□□□□ -0.42
NDE1-212ENST00000577101 ZKSCAN2Q63HK3 967 aa12.4□□□□□ -0.42
NDE1-212ENST00000577101 ANKRD44Q8N8A2 993 aa12.4□□□□□ -0.42
NDE1-212ENST00000577101 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.42
NDE1-212ENST00000577101 MEIS3Q99687 375 aa12.4□□□□□ -0.42
NDE1-212ENST00000577101 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
NDE1-212ENST00000577101 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.43
NDE1-212ENST00000577101 NFKBIEO00221 500 aa12.39□□□□□ -0.43
NDE1-212ENST00000577101 C21orf2O43822 256 aa12.39□□□□□ -0.43
NDE1-212ENST00000577101 PANK1Q8TE04 598 aa12.39□□□□□ -0.43
NDE1-212ENST00000577101 CNKSR1Q969H4 720 aa12.39□□□□□ -0.43
NDE1-212ENST00000577101 GREM2Q9H772 168 aa12.39□□□□□ -0.43
NDE1-212ENST00000577101 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
NDE1-212ENST00000577101 RASSF7Q02833 373 aa12.38□□□□□ -0.43
NDE1-212ENST00000577101 GRAPQ13588 217 aa12.38□□□□□ -0.43
NDE1-212ENST00000577101 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
NDE1-212ENST00000577101 GRAPLQ8TC17 118 aaPredicted RBP12.38□□□□□ -0.43
NDE1-212ENST00000577101 RPGRQ92834 1020 aaKnown RBP12.38□□□□□ -0.43
NDE1-212ENST00000577101 ZNF646O15015 1829 aaPredicted RBP12.38□□□□□ -0.43
NDE1-212ENST00000577101 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
NDE1-212ENST00000577101 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
NDE1-212ENST00000577101 RBM17Q96I25 401 aaKnown RBP12.37□□□□□ -0.43
NDE1-212ENST00000577101 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
NDE1-212ENST00000577101 C9orf78Q9NZ63 289 aaPredicted RBP12.37□□□□□ -0.43
NDE1-212ENST00000577101 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
NDE1-212ENST00000577101 PPEF1O14829 653 aaPredicted RBP12.36□□□□□ -0.43
NDE1-212ENST00000577101 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
NDE1-212ENST00000577101 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
NDE1-212ENST00000577101 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
NDE1-212ENST00000577101 DZIP1LQ8IYY4 767 aaKnown RBP12.36□□□□□ -0.43
NDE1-212ENST00000577101 ZBTB7BO15156 539 aaPredicted RBP12.35□□□□□ -0.43
NDE1-212ENST00000577101 RFX5P48382 616 aaPredicted RBP12.35□□□□□ -0.43
NDE1-212ENST00000577101 CCDC152Q4G0S7 254 aa12.35□□□□□ -0.43
NDE1-212ENST00000577101 DDX46Q7L014 1031 aaKnown RBP12.35□□□□□ -0.43
NDE1-212ENST00000577101 ATP6V0A2Q9Y487 856 aa12.35□□□□□ -0.43
NDE1-212ENST00000577101 ITGA6P23229 1130 aa12.34□□□□□ -0.43
NDE1-212ENST00000577101 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
NDE1-212ENST00000577101 ARHGAP27Q6ZUM4 889 aa12.34□□□□□ -0.43
NDE1-212ENST00000577101 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
NDE1-212ENST00000577101 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
NDE1-212ENST00000577101 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
NDE1-212ENST00000577101 BBOX1O75936 387 aa12.33□□□□□ -0.44
NDE1-212ENST00000577101 RRP1P56182 461 aaKnown RBP12.33□□□□□ -0.44
NDE1-212ENST00000577101 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
NDE1-212ENST00000577101 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
NDE1-212ENST00000577101 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
NDE1-212ENST00000577101 LTBP3Q9NS15 1303 aa12.33□□□□□ -0.44
NDE1-212ENST00000577101 SCN9AQ15858 1988 aa12.32□□□□□ -0.44
NDE1-212ENST00000577101 GPSM2P81274 684 aa12.32□□□□□ -0.44
NDE1-212ENST00000577101 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
NDE1-212ENST00000577101 PUS3Q9BZE2 481 aaKnown RBP12.32□□□□□ -0.44
NDE1-212ENST00000577101 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
NDE1-212ENST00000577101 PSME4Q14997 1843 aa12.32□□□□□ -0.44
NDE1-212ENST00000577101 UBTFL1P0CB47 393 aaPredicted RBP12.31□□□□□ -0.44
NDE1-212ENST00000577101 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
NDE1-212ENST00000577101 MVPQ14764 893 aaKnown RBP12.31□□□□□ -0.44
NDE1-212ENST00000577101 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
NDE1-212ENST00000577101 GPR101Q96P66 508 aaPredicted RBP12.31□□□□□ -0.44
NDE1-212ENST00000577101 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
NDE1-212ENST00000577101 POLLQ9UGP5 575 aa12.31□□□□□ -0.44
NDE1-212ENST00000577101 MINPP1Q9UNW1 487 aa12.31□□□□□ -0.44
NDE1-212ENST00000577101 IRS2Q9Y4H2 1338 aa12.31□□□□□ -0.44
NDE1-212ENST00000577101 PNMA6EA0A0J9YXQ4 647 aa12.3□□□□□ -0.44
NDE1-212ENST00000577101 SNAP23O00161 211 aa12.3□□□□□ -0.44
NDE1-212ENST00000577101 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
NDE1-212ENST00000577101 PTPN12Q05209 780 aaKnown RBP12.3□□□□□ -0.44
NDE1-212ENST00000577101 ANKRD18AQ8IVF6 992 aa12.3□□□□□ -0.44
NDE1-212ENST00000577101 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
NDE1-212ENST00000577101 PSMD1Q99460 953 aa12.3□□□□□ -0.44
NDE1-212ENST00000577101 ZNF277Q9NRM2 450 aaPredicted RBP12.3□□□□□ -0.44
NDE1-212ENST00000577101 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
NDE1-212ENST00000577101 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
NDE1-212ENST00000577101 ARAP2Q8WZ64 1704 aa12.29□□□□□ -0.44
NDE1-212ENST00000577101 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
NDE1-212ENST00000577101 MTX1Q13505 466 aa12.29□□□□□ -0.44
NDE1-212ENST00000577101 PDE3AQ14432 1141 aa12.29□□□□□ -0.44
NDE1-212ENST00000577101 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms