RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 MRPL50Q8N5N7 158 aaKnown RBP29.89■■■□□ 2.38
SNF8-217ENST00000576353 H7C1W4 665 aa29.88■■■□□ 2.37
SNF8-217ENST00000576353 ALDH1L2Q3SY69 923 aa29.88■■■□□ 2.37
SNF8-217ENST00000576353 CCDC152Q4G0S7 254 aa29.88■■■□□ 2.37
SNF8-217ENST00000576353 SSH1Q8WYL5 1049 aa29.88■■■□□ 2.37
SNF8-217ENST00000576353 ZNF277Q9NRM2 450 aaPredicted RBP29.88■■■□□ 2.37
SNF8-217ENST00000576353 DDX60Q8IY21 1712 aaKnown RBP29.86■■■□□ 2.37
SNF8-217ENST00000576353 BEND3Q5T5X7 828 aa29.86■■■□□ 2.37
SNF8-217ENST00000576353 UBE3BQ7Z3V4 1068 aa29.86■■■□□ 2.37
SNF8-217ENST00000576353 DPY19L2Q6NUT2 758 aa29.85■■■□□ 2.37
SNF8-217ENST00000576353 SNED1Q8TER0 1413 aa29.85■■■□□ 2.37
SNF8-217ENST00000576353 IARSP41252 1262 aaKnown RBP29.84■■■□□ 2.37
SNF8-217ENST00000576353 CELF1Q92879 486 aaKnown RBP29.84■■■□□ 2.37
SNF8-217ENST00000576353 PTPRCP08575 1304 aa29.84■■■□□ 2.37
SNF8-217ENST00000576353 LAMB2P55268 1798 aa29.84■■■□□ 2.37
SNF8-217ENST00000576353 GLTPD2A6NH11 291 aa29.83■■■□□ 2.37
SNF8-217ENST00000576353 CTSWP56202 376 aa29.83■■■□□ 2.37
SNF8-217ENST00000576353 RPS8P62241 208 aaKnown RBP29.83■■■□□ 2.37
SNF8-217ENST00000576353 SLC4A10Q6U841 1118 aa29.82■■■□□ 2.36
SNF8-217ENST00000576353 MPNDQ8N594 471 aa29.82■■■□□ 2.36
SNF8-217ENST00000576353 SUPT20HQ8NEM7 779 aa29.82■■■□□ 2.36
SNF8-217ENST00000576353 SMC4Q9NTJ3 1288 aa29.82■■■□□ 2.36
SNF8-217ENST00000576353 DPP8Q6V1X1 898 aaPredicted RBP29.81■■■□□ 2.36
SNF8-217ENST00000576353 BCL2L13Q9BXK5 485 aa29.81■■■□□ 2.36
SNF8-217ENST00000576353 ALDH1L1O75891 902 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 SLC51AQ86UW1 340 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 JDP2Q8WYK2 163 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 PLA2G12BQ9BX93 195 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 SRCIN1Q9C0H9 1055 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 VPS33BQ9H267 617 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 NMRK2Q9NPI5 230 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 SEC31BQ9NQW1 1179 aa29.8■■■□□ 2.36
SNF8-217ENST00000576353 KIF3CO14782 793 aa29.79■■■□□ 2.36
SNF8-217ENST00000576353 CASP7P55210 303 aa29.79■■■□□ 2.36
SNF8-217ENST00000576353 TTLL11Q8NHH1 800 aa29.79■■■□□ 2.36
SNF8-217ENST00000576353 CCDC85AQ96PX6 553 aaPredicted RBP29.79■■■□□ 2.36
SNF8-217ENST00000576353 RTFDC1Q9BY42 306 aaPredicted RBP29.79■■■□□ 2.36
SNF8-217ENST00000576353 CDC5LQ99459 802 aaKnown RBP29.77■■■□□ 2.36
SNF8-217ENST00000576353 RRAGCQ9HB90 399 aa29.77■■■□□ 2.36
SNF8-217ENST00000576353 CCDC88AQ3V6T2 1871 aa29.76■■■□□ 2.36
SNF8-217ENST00000576353 C1QTNF8P60827 252 aa29.76■■■□□ 2.35
SNF8-217ENST00000576353 ANKRD18AQ8IVF6 992 aa29.76■■■□□ 2.35
SNF8-217ENST00000576353 LARGE2Q8N3Y3 721 aa29.76■■■□□ 2.35
SNF8-217ENST00000576353 C9orf78Q9NZ63 289 aaPredicted RBP29.76■■■□□ 2.35
SNF8-217ENST00000576353 GRM8O00222 908 aa29.75■■■□□ 2.35
SNF8-217ENST00000576353 BRPF1P55201 1214 aaPredicted RBP29.75■■■□□ 2.35
SNF8-217ENST00000576353 PPIP5K2O43314 1243 aa29.74■■■□□ 2.35
SNF8-217ENST00000576353 GREM2Q9H772 168 aa29.74■■■□□ 2.35
SNF8-217ENST00000576353 NSFL1CQ9UNZ2 370 aaKnown RBP29.74■■■□□ 2.35
SNF8-217ENST00000576353 RTL9Q8NET4 1388 aa29.74■■■□□ 2.35
SNF8-217ENST00000576353 TIAM2Q8IVF5 1701 aa29.74■■■□□ 2.35
SNF8-217ENST00000576353 DICER1Q9UPY3 1922 aaKnown RBP29.73■■■□□ 2.35
SNF8-217ENST00000576353 FZD9O00144 591 aa29.73■■■□□ 2.35
SNF8-217ENST00000576353 RARSP54136 660 aaKnown RBP29.73■■■□□ 2.35
SNF8-217ENST00000576353 ZBED9Q6R2W3 1325 aa29.72■■■□□ 2.35
SNF8-217ENST00000576353 CSF1RP07333 972 aa29.72■■■□□ 2.35
SNF8-217ENST00000576353 VEGFAP15692 232 aaPredicted RBP29.72■■■□□ 2.35
SNF8-217ENST00000576353 C16orf71Q8IYS4 520 aaPredicted RBP29.72■■■□□ 2.35
SNF8-217ENST00000576353 DDNO94850 711 aaPredicted RBP29.71■■■□□ 2.35
SNF8-217ENST00000576353 AOC3Q16853 763 aa29.71■■■□□ 2.35
SNF8-217ENST00000576353 NIM1KQ8IY84 436 aa29.71■■■□□ 2.35
SNF8-217ENST00000576353 TOMM70O94826 608 aa29.7■■■□□ 2.35
SNF8-217ENST00000576353 EIF6P56537 245 aaKnown RBP29.7■■■□□ 2.35
SNF8-217ENST00000576353 GPSM2P81274 684 aa29.7■■■□□ 2.35
SNF8-217ENST00000576353 NOB1Q9ULX3 412 aaKnown RBP29.7■■■□□ 2.35
SNF8-217ENST00000576353 KIAA2012Q0VF49 1180 aa29.69■■■□□ 2.34
SNF8-217ENST00000576353 TAF1P21675 1872 aa29.69■■■□□ 2.34
SNF8-217ENST00000576353 FOXO4P98177 505 aa29.68■■■□□ 2.34
SNF8-217ENST00000576353 API5Q9BZZ5 524 aaKnown RBP29.68■■■□□ 2.34
SNF8-217ENST00000576353 BSDC1Q9NW68 430 aaPredicted RBP29.68■■■□□ 2.34
SNF8-217ENST00000576353 PODXL2Q9NZ53 605 aa29.68■■■□□ 2.34
SNF8-217ENST00000576353 ANKIB1Q9P2G1 1089 aa29.68■■■□□ 2.34
SNF8-217ENST00000576353 ZNF541Q9H0D2 1346 aa29.68■■■□□ 2.34
SNF8-217ENST00000576353 C6orf229H3BNL8 230 aa29.67■■■□□ 2.34
SNF8-217ENST00000576353 ITGA6P23229 1130 aa29.67■■■□□ 2.34
SNF8-217ENST00000576353 IGHMBP2P38935 993 aaKnown RBP29.67■■■□□ 2.34
SNF8-217ENST00000576353 FAM161AQ3B820 660 aa29.67■■■□□ 2.34
SNF8-217ENST00000576353 COL4A1P02462 1669 aa29.66■■■□□ 2.34
SNF8-217ENST00000576353 WASHC4Q2M389 1173 aa29.66■■■□□ 2.34
SNF8-217ENST00000576353 EYA3Q99504 573 aa29.66■■■□□ 2.34
SNF8-217ENST00000576353 POLLQ9UGP5 575 aa29.66■■■□□ 2.34
SNF8-217ENST00000576353 ZNRF3Q9ULT6 936 aa29.66■■■□□ 2.34
SNF8-217ENST00000576353 UTYO14607 1347 aa29.66■■■□□ 2.34
SNF8-217ENST00000576353 KIF16BQ96L93 1317 aa29.66■■■□□ 2.34
SNF8-217ENST00000576353 LRRC37AA6NMS7 1700 aa29.65■■■□□ 2.34
SNF8-217ENST00000576353 GPC2Q8N158 579 aa29.65■■■□□ 2.34
SNF8-217ENST00000576353 TBC1D16Q8TBP0 767 aa29.65■■■□□ 2.34
SNF8-217ENST00000576353 L3MBTL3Q96JM7 780 aaPredicted RBP29.65■■■□□ 2.34
SNF8-217ENST00000576353 ANKRD18BA2A2Z9 1011 aa29.64■■■□□ 2.34
SNF8-217ENST00000576353 POTECB2RU33 542 aa29.64■■■□□ 2.34
SNF8-217ENST00000576353 LMBR1LQ6UX01 489 aa29.64■■■□□ 2.34
SNF8-217ENST00000576353 ARHGAP45Q92619 1136 aa29.64■■■□□ 2.34
SNF8-217ENST00000576353 GGA1Q9UJY5 639 aa29.64■■■□□ 2.34
SNF8-217ENST00000576353 IQCA1LA6NCM1 817 aa29.63■■■□□ 2.33
SNF8-217ENST00000576353 NBPF7P0C2Y1 421 aaPredicted RBP29.63■■■□□ 2.33
SNF8-217ENST00000576353 CCT4P50991 539 aaKnown RBP29.63■■■□□ 2.33
SNF8-217ENST00000576353 IFIT5Q13325 482 aaKnown RBP29.63■■■□□ 2.33
SNF8-217ENST00000576353 RBM46Q8TBY0 533 aaKnown RBP29.63■■■□□ 2.33
SNF8-217ENST00000576353 MPHOSPH8Q99549 860 aa29.63■■■□□ 2.33
SNF8-217ENST00000576353 CHMP3Q9Y3E7 222 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms