RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 LMOD1P29536 600 aaPredicted RBP21.38■■□□□ 1.01
TRAP1-213ENST00000575707 SCNN1DP51172 638 aa21.38■■□□□ 1.01
TRAP1-213ENST00000575707 GOLGA2Q08379 1002 aa21.38■■□□□ 1.01
TRAP1-213ENST00000575707 SF3B3Q15393 1217 aaKnown RBP21.38■■□□□ 1.01
TRAP1-213ENST00000575707 CCDC184Q52MB2 194 aa21.38■■□□□ 1.01
TRAP1-213ENST00000575707 RIC3Q7Z5B4 369 aa21.38■■□□□ 1.01
TRAP1-213ENST00000575707 MPNDQ8N594 471 aa21.38■■□□□ 1.01
TRAP1-213ENST00000575707 ZNF428Q96B54 188 aa21.38■■□□□ 1.01
TRAP1-213ENST00000575707 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
TRAP1-213ENST00000575707 PHAXQ9H814 394 aaKnown RBP21.38■■□□□ 1.01
TRAP1-213ENST00000575707 C8orf58Q8NAV2 365 aa21.37■■□□□ 1.01
TRAP1-213ENST00000575707 ZNRF3Q9ULT6 936 aa21.37■■□□□ 1.01
TRAP1-213ENST00000575707 KIAA2012Q0VF49 1180 aa21.36■■□□□ 1.01
TRAP1-213ENST00000575707 CCDC27Q2M243 656 aa21.36■■□□□ 1.01
TRAP1-213ENST00000575707 EPS15P42566 896 aa21.35■■□□□ 1.01
TRAP1-213ENST00000575707 CCDC30Q5VVM6 783 aa21.35■■□□□ 1.01
TRAP1-213ENST00000575707 MAP1SQ66K74 1059 aaPredicted RBP21.35■■□□□ 1.01
TRAP1-213ENST00000575707 CNTROBQ8N137 903 aa21.35■■□□□ 1.01
TRAP1-213ENST00000575707 DUOX1Q9NRD9 1551 aa21.35■■□□□ 1.01
TRAP1-213ENST00000575707 TMEM88BA6NKF7 163 aa21.34■■□□□ 1.01
TRAP1-213ENST00000575707 IRS4O14654 1257 aaPredicted RBP21.34■■□□□ 1.01
TRAP1-213ENST00000575707 CXCL9Q07325 125 aa21.34■■□□□ 1.01
TRAP1-213ENST00000575707 RTL5Q5HYW3 569 aaPredicted RBP21.34■■□□□ 1.01
TRAP1-213ENST00000575707 ZBTB38Q8NAP3 1195 aaPredicted RBP21.34■■□□□ 1.01
TRAP1-213ENST00000575707 MKRN1Q9UHC7 482 aaKnown RBP21.34■■□□□ 1.01
TRAP1-213ENST00000575707 CNTNAP1P78357 1384 aa21.34■■□□□ 1.01
TRAP1-213ENST00000575707 USP50Q70EL3 339 aaPredicted RBP21.33■■□□□ 1.01
TRAP1-213ENST00000575707 CELF1Q92879 486 aaKnown RBP21.33■■□□□ 1.01
TRAP1-213ENST00000575707 HSPA1AP0DMV8 641 aaKnown RBP21.32■■□□□ 1
TRAP1-213ENST00000575707 HSPA1BP0DMV9 641 aaKnown RBP21.32■■□□□ 1
TRAP1-213ENST00000575707 HSP90B1P14625 803 aaKnown RBP21.32■■□□□ 1
TRAP1-213ENST00000575707 NCBP3Q53F19 620 aaKnown RBP21.32■■□□□ 1
TRAP1-213ENST00000575707 TSPYL6Q8N831 410 aa21.32■■□□□ 1
TRAP1-213ENST00000575707 CCDC191Q8NCU4 936 aa21.32■■□□□ 1
TRAP1-213ENST00000575707 MYD88Q99836 296 aa21.32■■□□□ 1
TRAP1-213ENST00000575707 GPRC5DQ9NZD1 345 aa21.32■■□□□ 1
TRAP1-213ENST00000575707 COL4A1P02462 1669 aa21.31■■□□□ 1
TRAP1-213ENST00000575707 DDX58O95786 925 aaKnown RBP21.31■■□□□ 1
TRAP1-213ENST00000575707 CIAPIN1Q6FI81 312 aa21.31■■□□□ 1
TRAP1-213ENST00000575707 WWC1Q8IX03 1113 aa21.31■■□□□ 1
TRAP1-213ENST00000575707 METTL22Q9BUU2 404 aaPredicted RBP21.31■■□□□ 1
TRAP1-213ENST00000575707 CDHR2Q9BYE9 1310 aa21.3■■□□□ 1
TRAP1-213ENST00000575707 PCCAP05165 728 aaPredicted RBP21.3■■□□□ 1
TRAP1-213ENST00000575707 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
TRAP1-213ENST00000575707 ADARB2Q9NS39 739 aaKnown RBP21.3■■□□□ 1
TRAP1-213ENST00000575707 COL13A1Q5TAT6 717 aaPredicted RBP21.29■■□□□ 1
TRAP1-213ENST00000575707 CWC25Q9NXE8 425 aaPredicted RBP21.29■■□□□ 1
TRAP1-213ENST00000575707 IL16Q14005 1332 aa21.29■■□□□ 1
TRAP1-213ENST00000575707 GMPSP49915 693 aaPredicted RBP21.28■■□□□ 1
TRAP1-213ENST00000575707 RPS8P62241 208 aaKnown RBP21.28■■□□□ 1
TRAP1-213ENST00000575707 TNIP1Q15025 636 aa21.28■■□□□ 1
TRAP1-213ENST00000575707 NSFL1CQ9UNZ2 370 aaKnown RBP21.28■■□□□ 1
TRAP1-213ENST00000575707 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
TRAP1-213ENST00000575707 YDJCA8MPS7 323 aa21.27■■□□□ 1
TRAP1-213ENST00000575707 ANP32CO43423 234 aa21.27■■□□□ 1
TRAP1-213ENST00000575707 RAD17O75943 681 aa21.27■■□□□ 1
TRAP1-213ENST00000575707 WASHC4Q2M389 1173 aa21.27■■□□□ 1
TRAP1-213ENST00000575707 STK31Q9BXU1 1019 aa21.27■■□□□ 1
TRAP1-213ENST00000575707 MRS2Q9HD23 443 aa21.27■■□□□ 1
TRAP1-213ENST00000575707 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
TRAP1-213ENST00000575707 RASSF10A6NK89 507 aa21.26■□□□□ 0.99
TRAP1-213ENST00000575707 PDE8AO60658 829 aa21.26■□□□□ 0.99
TRAP1-213ENST00000575707 GPSM2P81274 684 aa21.26■□□□□ 0.99
TRAP1-213ENST00000575707 CCDC152Q4G0S7 254 aa21.26■□□□□ 0.99
TRAP1-213ENST00000575707 KSR2Q6VAB6 950 aa21.26■□□□□ 0.99
TRAP1-213ENST00000575707 POLLQ9UGP5 575 aa21.26■□□□□ 0.99
TRAP1-213ENST00000575707 TRPM7Q96QT4 1865 aa21.26■□□□□ 0.99
TRAP1-213ENST00000575707 PI4KAP2A4QPH2 592 aa21.25■□□□□ 0.99
TRAP1-213ENST00000575707 VEGFBP49765 207 aa21.25■□□□□ 0.99
TRAP1-213ENST00000575707 TWISTNBQ3B726 338 aaPredicted RBP21.25■□□□□ 0.99
TRAP1-213ENST00000575707 PI4KAP1Q8N8J0 262 aa21.25■□□□□ 0.99
TRAP1-213ENST00000575707 BCL2L13Q9BXK5 485 aa21.25■□□□□ 0.99
TRAP1-213ENST00000575707 SEC31BQ9NQW1 1179 aa21.25■□□□□ 0.99
TRAP1-213ENST00000575707 C6orf229H3BNL8 230 aa21.24■□□□□ 0.99
TRAP1-213ENST00000575707 EYA3Q99504 573 aa21.24■□□□□ 0.99
TRAP1-213ENST00000575707 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
TRAP1-213ENST00000575707 IGKV5-2P06315 115 aa21.23■□□□□ 0.99
TRAP1-213ENST00000575707 DEFB115Q30KQ5 88 aa21.23■□□□□ 0.99
TRAP1-213ENST00000575707 TBC1D16Q8TBP0 767 aa21.23■□□□□ 0.99
TRAP1-213ENST00000575707 NEXNQ0ZGT2 675 aa21.22■□□□□ 0.99
TRAP1-213ENST00000575707 JARID2Q92833 1246 aaPredicted RBP21.22■□□□□ 0.99
TRAP1-213ENST00000575707 DBNDD1Q9H9R9 158 aa21.22■□□□□ 0.99
TRAP1-213ENST00000575707 PGAP2Q9UHJ9 254 aa21.22■□□□□ 0.99
TRAP1-213ENST00000575707 ABT1Q9ULW3 272 aaKnown RBP21.22■□□□□ 0.99
TRAP1-213ENST00000575707 MYH3P11055 1940 aa21.21■□□□□ 0.99
TRAP1-213ENST00000575707 CACNA1FO60840 1977 aa21.21■□□□□ 0.99
TRAP1-213ENST00000575707 PSMD14O00487 310 aa21.21■□□□□ 0.99
TRAP1-213ENST00000575707 RIMBP2O15034 1052 aa21.21■□□□□ 0.99
TRAP1-213ENST00000575707 FMR1Q06787 632 aaKnown RBP eCLIP21.21■□□□□ 0.992e-6■■■□□ 16.6
TRAP1-213ENST00000575707 ZC3H15Q8WU90 426 aaKnown RBP21.21■□□□□ 0.99
TRAP1-213ENST00000575707 DPF2Q92785 391 aa21.21■□□□□ 0.99
TRAP1-213ENST00000575707 CNOT7Q9UIV1 285 aaKnown RBP21.21■□□□□ 0.99
TRAP1-213ENST00000575707 TRAF5O00463 557 aa21.2■□□□□ 0.98
TRAP1-213ENST00000575707 ECE2O60344 883 aa21.2■□□□□ 0.98
TRAP1-213ENST00000575707 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
TRAP1-213ENST00000575707 HIRAP54198 1017 aaPredicted RBP21.2■□□□□ 0.98
TRAP1-213ENST00000575707 G2E3Q7L622 706 aa21.2■□□□□ 0.98
TRAP1-213ENST00000575707 WDR63Q8IWG1 891 aa21.2■□□□□ 0.98
TRAP1-213ENST00000575707 FANCIQ9NVI1 1328 aa21.2■□□□□ 0.98
TRAP1-213ENST00000575707 H7C1D1 291 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms