RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	HTRA3	P83110	453 aa		18.21	■□□□□ 0.51
EDC4-210	ENST00000575507	FSTL1	Q12841	308 aa		18.21	■□□□□ 0.51
EDC4-210	ENST00000575507	CWF19L2	Q2TBE0	894 aa	Known RBP	18.21	■□□□□ 0.51
EDC4-210	ENST00000575507	SEC31B	Q9NQW1	1179 aa		18.21	■□□□□ 0.51
EDC4-210	ENST00000575507	LAMB2	P55268	1798 aa		18.21	■□□□□ 0.51
EDC4-210	ENST00000575507	DICER1	Q9UPY3	1922 aa	Known RBP	18.21	■□□□□ 0.51
EDC4-210	ENST00000575507	WDR90	Q96KV7	1748 aa		18.2	■□□□□ 0.5
EDC4-210	ENST00000575507	AOC3	Q16853	763 aa		18.2	■□□□□ 0.5
EDC4-210	ENST00000575507	GRIPAP1	Q4V328	841 aa		18.2	■□□□□ 0.5
EDC4-210	ENST00000575507	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.2	■□□□□ 0.5
EDC4-210	ENST00000575507	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.2	■□□□□ 0.5
EDC4-210	ENST00000575507	CWC25	Q9NXE8	425 aa	Predicted RBP	18.2	■□□□□ 0.5
EDC4-210	ENST00000575507	DDX60	Q8IY21	1712 aa	Known RBP	18.2	■□□□□ 0.5
EDC4-210	ENST00000575507	FLII	Q13045	1269 aa		18.19	■□□□□ 0.5
EDC4-210	ENST00000575507	LARGE2	Q8N3Y3	721 aa		18.19	■□□□□ 0.5
EDC4-210	ENST00000575507	MPND	Q8N594	471 aa		18.19	■□□□□ 0.5
EDC4-210	ENST00000575507	DNAJC5G	Q8N7S2	189 aa		18.19	■□□□□ 0.5
EDC4-210	ENST00000575507	SMC1B	Q8NDV3	1235 aa		18.19	■□□□□ 0.5
EDC4-210	ENST00000575507	JDP2	Q8WYK2	163 aa		18.19	■□□□□ 0.5
EDC4-210	ENST00000575507	NEURL1B	A8MQ27	555 aa		18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	PPIP5K2	O43314	1243 aa		18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	PDE8A	O60658	829 aa		18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	APLP1	P51693	650 aa		18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	DPP8	Q6V1X1	898 aa	Predicted RBP	18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	TAF1	P21675	1872 aa		18.17	■□□□□ 0.5
EDC4-210	ENST00000575507	RPS8	P62241	208 aa	Known RBP	18.16	■□□□□ 0.5
EDC4-210	ENST00000575507	MYH16	Q9H6N6	1097 aa		18.16	■□□□□ 0.5
EDC4-210	ENST00000575507		H7C1W4	665 aa		18.15	■□□□□ 0.5
EDC4-210	ENST00000575507	GPSM2	P81274	684 aa		18.15	■□□□□ 0.5
EDC4-210	ENST00000575507	GPC2	Q8N158	579 aa		18.15	■□□□□ 0.5
EDC4-210	ENST00000575507	TMX4	Q9H1E5	349 aa	Predicted RBP	18.15	■□□□□ 0.5
EDC4-210	ENST00000575507	VPS33B	Q9H267	617 aa		18.15	■□□□□ 0.5
EDC4-210	ENST00000575507	GJA3	Q9Y6H8	435 aa		18.15	■□□□□ 0.5
EDC4-210	ENST00000575507		F6X3S4	739 aa		18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	EIF6	P56537	245 aa	Known RBP	18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	KIAA2012	Q0VF49	1180 aa		18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	FKBP5	Q13451	457 aa	Predicted RBP	18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	TMC4	Q7Z404	712 aa		18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	NIM1K	Q8IY84	436 aa		18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	DNAAF4	Q8WXU2	420 aa		18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	POLL	Q9UGP5	575 aa		18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	CDHR2	Q9BYE9	1310 aa		18.14	■□□□□ 0.49
EDC4-210	ENST00000575507	DUOX1	Q9NRD9	1551 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	CASP7	P55210	303 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	CXCL9	Q07325	125 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	NEXN	Q0ZGT2	675 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	GCKR	Q14397	625 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	SUPT20H	Q8NEM7	779 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	TTLL11	Q8NHH1	800 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	GPR101	Q96P66	508 aa	Predicted RBP	18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	HACL1	Q9UJ83	578 aa		18.13	■□□□□ 0.49
EDC4-210	ENST00000575507	IQCA1L	A6NCM1	817 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	YDJC	A8MPS7	323 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	EPHX2	P34913	555 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	EPS15	P42566	896 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	SCNN1D	P51172	638 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	CHADL	Q6NUI6	762 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	UBE3B	Q7Z3V4	1068 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	CDCA7L	Q96GN5	454 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	ZNRF3	Q9ULT6	936 aa		18.12	■□□□□ 0.49
EDC4-210	ENST00000575507	WTIP	A6NIX2	430 aa	Predicted RBP	18.11	■□□□□ 0.49
EDC4-210	ENST00000575507	CCER2	I3L3R5	266 aa		18.11	■□□□□ 0.49
EDC4-210	ENST00000575507	CTSW	P56202	376 aa		18.11	■□□□□ 0.49
EDC4-210	ENST00000575507	CCDC152	Q4G0S7	254 aa		18.11	■□□□□ 0.49
EDC4-210	ENST00000575507	BEND3	Q5T5X7	828 aa		18.11	■□□□□ 0.49
EDC4-210	ENST00000575507	MIER1	Q8N108	512 aa		18.11	■□□□□ 0.49
EDC4-210	ENST00000575507	LINS1	Q8NG48	757 aa		18.11	■□□□□ 0.49
EDC4-210	ENST00000575507	RIMBP2	O15034	1052 aa		18.1	■□□□□ 0.49
EDC4-210	ENST00000575507	SLFN5	Q08AF3	891 aa		18.1	■□□□□ 0.49
EDC4-210	ENST00000575507	EAPP	Q56P03	285 aa	Predicted RBP	18.1	■□□□□ 0.49
EDC4-210	ENST00000575507	GREM2	Q9H772	168 aa		18.1	■□□□□ 0.49
EDC4-210	ENST00000575507	KCNQ5	Q9NR82	932 aa		18.1	■□□□□ 0.49
EDC4-210	ENST00000575507	C6orf229	H3BNL8	230 aa		18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	RAD17	O75943	681 aa		18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	ITGBL1	O95965	494 aa	Predicted RBP	18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	HSP90B1	P14625	803 aa	Known RBP	18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	WASHC4	Q2M389	1173 aa		18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	LDHD	Q86WU2	507 aa		18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	TBC1D16	Q8TBP0	767 aa		18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	LRRC37A	A6NMS7	1700 aa		18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	LTBP1	Q14766	1721 aa		18.09	■□□□□ 0.49
EDC4-210	ENST00000575507	PODXL2	Q9NZ53	605 aa		18.08	■□□□□ 0.48
EDC4-210	ENST00000575507	CSF1R	P07333	972 aa		18.07	■□□□□ 0.48
EDC4-210	ENST00000575507	DOK7	Q18PE1	504 aa		18.07	■□□□□ 0.48
EDC4-210	ENST00000575507	ANKRD18A	Q8IVF6	992 aa		18.07	■□□□□ 0.48
EDC4-210	ENST00000575507	PLA2G12B	Q9BX93	195 aa		18.07	■□□□□ 0.48
EDC4-210	ENST00000575507	DBNDD1	Q9H9R9	158 aa		18.07	■□□□□ 0.48
EDC4-210	ENST00000575507	CEP350	Q5VT06	3117 aa		18.07	■□□□□ 0.48
EDC4-210	ENST00000575507	SHTN1	A0MZ66	631 aa		18.06	■□□□□ 0.48
EDC4-210	ENST00000575507		E9PSI1	815 aa		18.06	■□□□□ 0.48
EDC4-210	ENST00000575507	GMPS	P49915	693 aa	Predicted RBP	18.06	■□□□□ 0.48
EDC4-210	ENST00000575507	MAP1S	Q66K74	1059 aa	Predicted RBP	18.06	■□□□□ 0.48
EDC4-210	ENST00000575507	CIAPIN1	Q6FI81	312 aa		18.06	■□□□□ 0.48
EDC4-210	ENST00000575507	PNMA8A	Q86V59	439 aa	Predicted RBP	18.06	■□□□□ 0.48
EDC4-210	ENST00000575507	TRMT2A	Q8IZ69	625 aa	Known RBP	18.06	■□□□□ 0.48
EDC4-210	ENST00000575507	MRPL50	Q8N5N7	158 aa	Known RBP	18.06	■□□□□ 0.48
EDC4-210	ENST00000575507	GPRC5D	Q9NZD1	345 aa		18.06	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms