RNA–Protein interactions for RNA: ENST00000574060.1

RNF213-218, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-218ENST00000574060 PDE8AO60658 829 aa17.02■□□□□ 0.32
RNF213-218ENST00000574060 BBOX1O75936 387 aa17.02■□□□□ 0.32
RNF213-218ENST00000574060 PRELPP51888 382 aa17.02■□□□□ 0.32
RNF213-218ENST00000574060 FKBP4Q02790 459 aaKnown RBP eCLIP17.02■□□□□ 0.32
RNF213-218ENST00000574060 GRAPQ13588 217 aa17.02■□□□□ 0.32
RNF213-218ENST00000574060 GCKRQ14397 625 aa17.02■□□□□ 0.32
RNF213-218ENST00000574060 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
RNF213-218ENST00000574060 GRAPLQ8TC17 118 aaPredicted RBP17.02■□□□□ 0.32
RNF213-218ENST00000574060 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
RNF213-218ENST00000574060 H7C1W4 665 aa17.01■□□□□ 0.31
RNF213-218ENST00000574060 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
RNF213-218ENST00000574060 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
RNF213-218ENST00000574060 SMC4Q9NTJ3 1288 aa17.01■□□□□ 0.31
RNF213-218ENST00000574060 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
RNF213-218ENST00000574060 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
RNF213-218ENST00000574060 TAF1P21675 1872 aa17.01■□□□□ 0.31
RNF213-218ENST00000574060 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
RNF213-218ENST00000574060 CCDC152Q4G0S7 254 aa17■□□□□ 0.31
RNF213-218ENST00000574060 UBE3BQ7Z3V4 1068 aa17■□□□□ 0.31
RNF213-218ENST00000574060 TMC4Q7Z404 712 aa17■□□□□ 0.31
RNF213-218ENST00000574060 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
RNF213-218ENST00000574060 PSMD1Q99460 953 aa17■□□□□ 0.31
RNF213-218ENST00000574060 BCL2L13Q9BXK5 485 aa17■□□□□ 0.31
RNF213-218ENST00000574060 GPBP1L1Q9HC44 474 aaPredicted RBP16.99■□□□□ 0.31
RNF213-218ENST00000574060 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
RNF213-218ENST00000574060 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
RNF213-218ENST00000574060 CTSWP56202 376 aa16.98■□□□□ 0.31
RNF213-218ENST00000574060 SLC4A10Q6U841 1118 aa16.98■□□□□ 0.31
RNF213-218ENST00000574060 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
RNF213-218ENST00000574060 ZNF526Q8TF50 670 aaPredicted RBP16.98■□□□□ 0.31
RNF213-218ENST00000574060 CASP7P55210 303 aa16.97■□□□□ 0.31
RNF213-218ENST00000574060 CELF1Q92879 486 aaKnown RBP16.97■□□□□ 0.31
RNF213-218ENST00000574060 PLA2G12BQ9BX93 195 aa16.97■□□□□ 0.31
RNF213-218ENST00000574060 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
RNF213-218ENST00000574060 COL4A1P02462 1669 aa16.97■□□□□ 0.31
RNF213-218ENST00000574060 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
RNF213-218ENST00000574060 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
RNF213-218ENST00000574060 ZNF277Q9NRM2 450 aaPredicted RBP16.96■□□□□ 0.31
RNF213-218ENST00000574060 RTL9Q8NET4 1388 aa16.96■□□□□ 0.31
RNF213-218ENST00000574060 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.3
RNF213-218ENST00000574060 GRM8O00222 908 aa16.95■□□□□ 0.3
RNF213-218ENST00000574060 RPS8P62241 208 aaKnown RBP16.95■□□□□ 0.3
RNF213-218ENST00000574060 SLC51AQ86UW1 340 aa16.95■□□□□ 0.3
RNF213-218ENST00000574060 TTLL11Q8NHH1 800 aa16.95■□□□□ 0.3
RNF213-218ENST00000574060 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
RNF213-218ENST00000574060 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
RNF213-218ENST00000574060 MPNDQ8N594 471 aa16.94■□□□□ 0.3
RNF213-218ENST00000574060 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
RNF213-218ENST00000574060 CCDC85AQ96PX6 553 aaPredicted RBP16.94■□□□□ 0.3
RNF213-218ENST00000574060 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
RNF213-218ENST00000574060 SEC31BQ9NQW1 1179 aa16.94■□□□□ 0.3
RNF213-218ENST00000574060 C9orf78Q9NZ63 289 aaPredicted RBP16.94■□□□□ 0.3
RNF213-218ENST00000574060 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
RNF213-218ENST00000574060 GLTPD2A6NH11 291 aa16.93■□□□□ 0.3
RNF213-218ENST00000574060 CDC5LQ99459 802 aaKnown RBP16.93■□□□□ 0.3
RNF213-218ENST00000574060 VPS33BQ9H267 617 aa16.93■□□□□ 0.3
RNF213-218ENST00000574060 GREM2Q9H772 168 aa16.93■□□□□ 0.3
RNF213-218ENST00000574060 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
RNF213-218ENST00000574060 CSF1RP07333 972 aa16.92■□□□□ 0.3
RNF213-218ENST00000574060 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
RNF213-218ENST00000574060 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
RNF213-218ENST00000574060 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
RNF213-218ENST00000574060 NOB1Q9ULX3 412 aaKnown RBP16.92■□□□□ 0.3
RNF213-218ENST00000574060 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
RNF213-218ENST00000574060 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
RNF213-218ENST00000574060 UTYO14607 1347 aa16.91■□□□□ 0.3
RNF213-218ENST00000574060 COL4A5P29400 1685 aa16.91■□□□□ 0.3
RNF213-218ENST00000574060 WDR90Q96KV7 1748 aa16.9■□□□□ 0.3
RNF213-218ENST00000574060 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
RNF213-218ENST00000574060 FOXO4P98177 505 aa16.9■□□□□ 0.3
RNF213-218ENST00000574060 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
RNF213-218ENST00000574060 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
RNF213-218ENST00000574060 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
RNF213-218ENST00000574060 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
RNF213-218ENST00000574060 FZD9O00144 591 aa16.89■□□□□ 0.29
RNF213-218ENST00000574060 KIF3CO14782 793 aa16.89■□□□□ 0.29
RNF213-218ENST00000574060 ITGA6P23229 1130 aa16.89■□□□□ 0.29
RNF213-218ENST00000574060 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
RNF213-218ENST00000574060 FAM161AQ3B820 660 aa16.89■□□□□ 0.29
RNF213-218ENST00000574060 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
RNF213-218ENST00000574060 NBPF7P0C2Y1 421 aaPredicted RBP16.88■□□□□ 0.29
RNF213-218ENST00000574060 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
RNF213-218ENST00000574060 GPSM2P81274 684 aa16.88■□□□□ 0.29
RNF213-218ENST00000574060 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
RNF213-218ENST00000574060 AOC3Q16853 763 aa16.88■□□□□ 0.29
RNF213-218ENST00000574060 NIM1KQ8IY84 436 aa16.88■□□□□ 0.29
RNF213-218ENST00000574060 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
RNF213-218ENST00000574060 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
RNF213-218ENST00000574060 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
RNF213-218ENST00000574060 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
RNF213-218ENST00000574060 BCAR3O75815 825 aa16.86■□□□□ 0.29
RNF213-218ENST00000574060 EIF6P56537 245 aaKnown RBP16.86■□□□□ 0.29
RNF213-218ENST00000574060 IFIT5Q13325 482 aaKnown RBP16.86■□□□□ 0.29
RNF213-218ENST00000574060 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
RNF213-218ENST00000574060 LMBR1LQ6UX01 489 aa16.86■□□□□ 0.29
RNF213-218ENST00000574060 SUCLG2Q96I99 432 aa16.86■□□□□ 0.29
RNF213-218ENST00000574060 EYA3Q99504 573 aa16.86■□□□□ 0.29
RNF213-218ENST00000574060 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
RNF213-218ENST00000574060 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
RNF213-218ENST00000574060 RRAGCQ9HB90 399 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms