RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 CEP85Q6P2H3 762 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 TMC4Q7Z404 712 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 LRP10Q7Z4F1 713 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 ANKRD44Q8N8A2 993 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 PI4KAP1Q8N8J0 262 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 PSMD1Q99460 953 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 TMX4Q9H1E5 349 aaPredicted RBP11.97□□□□□ -0.49
NDE1-208ENST00000573694 HYPKQ9NX55 129 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 RBM19Q9Y4C8 960 aaKnown RBP11.97□□□□□ -0.49
NDE1-208ENST00000573694 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
NDE1-208ENST00000573694 PDE4AP27815 886 aa11.96□□□□□ -0.49
NDE1-208ENST00000573694 AIMP1Q12904 312 aaKnown RBP11.96□□□□□ -0.49
NDE1-208ENST00000573694 ERFEQ4G0M1 354 aa11.96□□□□□ -0.49
NDE1-208ENST00000573694 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.49
NDE1-208ENST00000573694 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.49
NDE1-208ENST00000573694 ANKRD36CQ5JPF3 1778 aa11.96□□□□□ -0.49
NDE1-208ENST00000573694 C21orf2O43822 256 aa11.95□□□□□ -0.5
NDE1-208ENST00000573694 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
NDE1-208ENST00000573694 TRIM28Q13263 835 aaKnown RBP11.95□□□□□ -0.5
NDE1-208ENST00000573694 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
NDE1-208ENST00000573694 KSR2Q6VAB6 950 aa11.95□□□□□ -0.5
NDE1-208ENST00000573694 ZNF526Q8TF50 670 aaPredicted RBP11.95□□□□□ -0.5
NDE1-208ENST00000573694 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
NDE1-208ENST00000573694 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
NDE1-208ENST00000573694 SRCIN1Q9C0H9 1055 aa11.95□□□□□ -0.5
NDE1-208ENST00000573694 WWC3Q9ULE0 1092 aa11.95□□□□□ -0.5
NDE1-208ENST00000573694 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
NDE1-208ENST00000573694 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
NDE1-208ENST00000573694 FER1L6Q2WGJ9 1857 aa11.94□□□□□ -0.5
NDE1-208ENST00000573694 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
NDE1-208ENST00000573694 BBOX1O75936 387 aa11.94□□□□□ -0.5
NDE1-208ENST00000573694 HLFQ16534 295 aa11.94□□□□□ -0.5
NDE1-208ENST00000573694 RBM17Q96I25 401 aaKnown RBP11.94□□□□□ -0.5
NDE1-208ENST00000573694 UTP14AQ9BVJ6 771 aaKnown RBP11.94□□□□□ -0.5
NDE1-208ENST00000573694 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
NDE1-208ENST00000573694 NMRK2Q9NPI5 230 aa11.94□□□□□ -0.5
NDE1-208ENST00000573694 GNAI2P04899 355 aa11.93□□□□□ -0.5
NDE1-208ENST00000573694 GNAI3P08754 354 aa11.93□□□□□ -0.5
NDE1-208ENST00000573694 NUCB1Q02818 461 aa11.93□□□□□ -0.5
NDE1-208ENST00000573694 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
NDE1-208ENST00000573694 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
NDE1-208ENST00000573694 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
NDE1-208ENST00000573694 LNPKQ9C0E8 428 aa11.93□□□□□ -0.5
NDE1-208ENST00000573694 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
NDE1-208ENST00000573694 LRRFIP2Q9Y608 721 aaKnown RBP11.93□□□□□ -0.5
NDE1-208ENST00000573694 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
NDE1-208ENST00000573694 UBTFL1P0CB47 393 aaPredicted RBP11.92□□□□□ -0.5
NDE1-208ENST00000573694 CWF19L2Q2TBE0 894 aaKnown RBP11.92□□□□□ -0.5
NDE1-208ENST00000573694 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
NDE1-208ENST00000573694 SUPT20HQ8NEM7 779 aa11.92□□□□□ -0.5
NDE1-208ENST00000573694 PLBD2Q8NHP8 589 aa11.92□□□□□ -0.5
NDE1-208ENST00000573694 GCC1Q96CN9 775 aa11.92□□□□□ -0.5
NDE1-208ENST00000573694 NUP98P52948 1817 aa11.92□□□□□ -0.5
NDE1-208ENST00000573694 NTSR2O95665 410 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 RASSF7Q02833 373 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 TTLL7Q6ZT98 887 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 RIC3Q7Z5B4 369 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
NDE1-208ENST00000573694 CHD1LQ86WJ1 897 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 BACH2Q9BYV9 841 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
NDE1-208ENST00000573694 PNMA6EA0A0J9YXQ4 647 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 FZD9O00144 591 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 ALDH1L1O75891 902 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 IGKV5-2P06315 115 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 NBPF7P0C2Y1 421 aaPredicted RBP11.9□□□□□ -0.5
NDE1-208ENST00000573694 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 SUSD4Q5VX71 490 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 GPC2Q8N158 579 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 MYD88Q99836 296 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 DCTPP1Q9H773 170 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 SLX4Q8IY92 1834 aa11.9□□□□□ -0.5
NDE1-208ENST00000573694 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
NDE1-208ENST00000573694 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
NDE1-208ENST00000573694 PRELPP51888 382 aa11.89□□□□□ -0.51
NDE1-208ENST00000573694 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
NDE1-208ENST00000573694 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
NDE1-208ENST00000573694 LINS1Q8NG48 757 aa11.89□□□□□ -0.51
NDE1-208ENST00000573694 METTL22Q9BUU2 404 aaPredicted RBP11.89□□□□□ -0.51
NDE1-208ENST00000573694 RTFDC1Q9BY42 306 aaPredicted RBP11.89□□□□□ -0.51
NDE1-208ENST00000573694 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
NDE1-208ENST00000573694 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 NEURL1BA8MQ27 555 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 APBB1O00213 710 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
NDE1-208ENST00000573694 HMMRO75330 724 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 ATP8B2P98198 1209 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 NLRP10Q86W26 655 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 LDHDQ86WU2 507 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 SP8Q8IXZ3 490 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 SYNE4Q8N205 404 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 ATP6V0A2Q9Y487 856 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 SCN4AP35499 1836 aa11.88□□□□□ -0.51
NDE1-208ENST00000573694 POTECB2RU33 542 aa11.87□□□□□ -0.51
NDE1-208ENST00000573694 SF3B3Q15393 1217 aaKnown RBP11.87□□□□□ -0.51
NDE1-208ENST00000573694 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms