RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
TVP23A-207ENST00000573360 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
TVP23A-207ENST00000573360 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
TVP23A-207ENST00000573360 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
TVP23A-207ENST00000573360 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
TVP23A-207ENST00000573360 GOLIM4O00461 696 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 MTX1Q13505 466 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 IL25Q9H293 177 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 ZNF652Q9Y2D9 606 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
TVP23A-207ENST00000573360 CASP7P55210 303 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 PI16Q6UXB8 463 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 SETDB2Q96T68 719 aa16.86■□□□□ 0.29
TVP23A-207ENST00000573360 A0A1B0GUL7 405 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 EYA2O00167 538 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 ADORA1P30542 326 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 MRC1P22897 1456 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
TVP23A-207ENST00000573360 REC8O95072 547 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 CHMLP26374 656 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 TTLL11Q8NHH1 800 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 TFCP2L1Q9NZI6 479 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
TVP23A-207ENST00000573360 COL15A1P39059 1388 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 CTSWP56202 376 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
TVP23A-207ENST00000573360 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
TVP23A-207ENST00000573360 COPRSQ9NQ92 184 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 RFX5P48382 616 aaPredicted RBP16.84■□□□□ 0.29
TVP23A-207ENST00000573360 TRAPPC3LQ5T215 181 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
TVP23A-207ENST00000573360 NCLP19338 710 aaKnown RBP16.84■□□□□ 0.29
TVP23A-207ENST00000573360 MSL1Q68DK7 614 aa16.84■□□□□ 0.29
TVP23A-207ENST00000573360 TTC39AQ5SRH9 613 aa16.83■□□□□ 0.28
TVP23A-207ENST00000573360 JAG2Q9Y219 1238 aa16.83■□□□□ 0.28
TVP23A-207ENST00000573360 PLCH1Q4KWH8 1693 aa16.83■□□□□ 0.28
TVP23A-207ENST00000573360 RXRBP28702 533 aa16.83■□□□□ 0.28
TVP23A-207ENST00000573360 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
TVP23A-207ENST00000573360 UTYO14607 1347 aa16.83■□□□□ 0.28
TVP23A-207ENST00000573360 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
TVP23A-207ENST00000573360 PDE8AO60658 829 aa16.82■□□□□ 0.28
TVP23A-207ENST00000573360 IFIT1P09914 478 aaKnown RBP16.82■□□□□ 0.28
TVP23A-207ENST00000573360 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
TVP23A-207ENST00000573360 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
TVP23A-207ENST00000573360 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
TVP23A-207ENST00000573360 IL15P40933 162 aaPredicted RBP16.82■□□□□ 0.28
TVP23A-207ENST00000573360 SEC62Q99442 399 aaKnown RBP16.82■□□□□ 0.28
TVP23A-207ENST00000573360 WASHC4Q2M389 1173 aa16.81■□□□□ 0.28
TVP23A-207ENST00000573360 WTIPA6NIX2 430 aaPredicted RBP16.81■□□□□ 0.28
TVP23A-207ENST00000573360 NEK4P51957 841 aa16.81■□□□□ 0.28
TVP23A-207ENST00000573360 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
TVP23A-207ENST00000573360 ATG9AQ7Z3C6 839 aa16.81■□□□□ 0.28
TVP23A-207ENST00000573360 CD2BP2O95400 341 aaKnown RBP16.8■□□□□ 0.28
TVP23A-207ENST00000573360 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
TVP23A-207ENST00000573360 CPA1P15085 419 aa16.8■□□□□ 0.28
TVP23A-207ENST00000573360 C3orf67Q6ZVT6 689 aa16.8■□□□□ 0.28
TVP23A-207ENST00000573360 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
TVP23A-207ENST00000573360 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
TVP23A-207ENST00000573360 FAM43AQ8N2R8 423 aa16.8■□□□□ 0.28
TVP23A-207ENST00000573360 NAP1L5Q96NT1 182 aaPredicted RBP16.8■□□□□ 0.28
TVP23A-207ENST00000573360 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
TVP23A-207ENST00000573360 PALD1Q9ULE6 856 aa16.8■□□□□ 0.28
TVP23A-207ENST00000573360 ERVV-1B6SEH8 477 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
TVP23A-207ENST00000573360 NMIQ13287 307 aaPredicted RBP16.79■□□□□ 0.28
TVP23A-207ENST00000573360 CCDC158Q5M9N0 1113 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 ZNF34Q8IZ26 560 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 STK11IPQ8N1F8 1099 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 GBP4Q96PP9 640 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 USP26Q9BXU7 913 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 IDH1O75874 414 aaKnown RBP16.79■□□□□ 0.28
TVP23A-207ENST00000573360 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
TVP23A-207ENST00000573360 UTRNP46939 3433 aa16.79■□□□□ 0.28
TVP23A-207ENST00000573360 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
TVP23A-207ENST00000573360 ZNF772Q68DY9 489 aaPredicted RBP16.78■□□□□ 0.28
TVP23A-207ENST00000573360 OSBPL3Q9H4L5 887 aa16.78■□□□□ 0.28
TVP23A-207ENST00000573360 STAP2Q9UGK3 403 aa16.78■□□□□ 0.28
TVP23A-207ENST00000573360 MCCP23508 829 aa16.78■□□□□ 0.28
TVP23A-207ENST00000573360 SLC51AQ86UW1 340 aa16.78■□□□□ 0.28
TVP23A-207ENST00000573360 PRPF40BQ6NWY9 871 aaKnown RBP16.78■□□□□ 0.28
TVP23A-207ENST00000573360 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
TVP23A-207ENST00000573360 RPS6KA4O75676 772 aa16.77■□□□□ 0.28
TVP23A-207ENST00000573360 TXNRD1Q16881 649 aa16.77■□□□□ 0.28
TVP23A-207ENST00000573360 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
TVP23A-207ENST00000573360 VPS37DQ86XT2 251 aa16.77■□□□□ 0.28
TVP23A-207ENST00000573360 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
TVP23A-207ENST00000573360 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
TVP23A-207ENST00000573360 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
TVP23A-207ENST00000573360 TRIM44Q96DX7 344 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms