RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 FRRS1LQ9P0K9 344 aa7.46□□□□□ -1.22
ERCC4-204ENST00000573018 ALX3O95076 343 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 EPB42P16452 691 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 SSTR4P31391 388 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 IDH3AP50213 366 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 SEC13P55735 322 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 PCSK7Q16549 785 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 IFT43Q96FT9 208 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 HINFPQ9BQA5 517 aa7.45□□□□□ -1.22
ERCC4-204ENST00000573018 SMG9Q9H0W8 520 aaKnown RBP7.45□□□□□ -1.22
ERCC4-204ENST00000573018 SASH3O75995 380 aa7.44□□□□□ -1.22
ERCC4-204ENST00000573018 MAP3K6O95382 1288 aa7.44□□□□□ -1.22
ERCC4-204ENST00000573018 RARAP10276 462 aa7.44□□□□□ -1.22
ERCC4-204ENST00000573018 TRPM4Q8TD43 1214 aa7.44□□□□□ -1.22
ERCC4-204ENST00000573018 EIF2AK2P19525 551 aaKnown RBP7.43□□□□□ -1.22
ERCC4-204ENST00000573018 FSTP19883 344 aa7.43□□□□□ -1.22
ERCC4-204ENST00000573018 INPP5BP32019 993 aa7.43□□□□□ -1.22
ERCC4-204ENST00000573018 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
ERCC4-204ENST00000573018 DLL1O00548 723 aa7.42□□□□□ -1.22
ERCC4-204ENST00000573018 GPLD1P80108 840 aa7.42□□□□□ -1.22
ERCC4-204ENST00000573018 DGKZQ13574 1117 aa7.42□□□□□ -1.22
ERCC4-204ENST00000573018 ARSDP51689 593 aa7.41□□□□□ -1.22
ERCC4-204ENST00000573018 USP20Q9Y2K6 914 aa7.41□□□□□ -1.22
ERCC4-204ENST00000573018 UBTFP17480 764 aaKnown RBP7.4□□□□□ -1.22
ERCC4-204ENST00000573018 DZIP1LQ8IYY4 767 aaKnown RBP7.4□□□□□ -1.22
ERCC4-204ENST00000573018 TTC9Q92623 222 aa7.4□□□□□ -1.22
ERCC4-204ENST00000573018 J3QW42 95 aa7.39□□□□□ -1.23
ERCC4-204ENST00000573018 MICAL2O94851 1124 aa7.39□□□□□ -1.23
ERCC4-204ENST00000573018 IGFBP4P22692 258 aa7.39□□□□□ -1.23
ERCC4-204ENST00000573018 DPYDQ12882 1025 aa7.39□□□□□ -1.23
ERCC4-204ENST00000573018 GDF6Q6KF10 455 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-204ENST00000573018 LARP1Q6PKG0 1096 aaKnown RBP7.39□□□□□ -1.23
ERCC4-204ENST00000573018 TFIP11Q9UBB9 837 aaKnown RBP7.39□□□□□ -1.23
ERCC4-204ENST00000573018 COL17A1Q9UMD9 1497 aaPredicted RBP7.38□□□□□ -1.23
ERCC4-204ENST00000573018 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
ERCC4-204ENST00000573018 PAX4O43316 350 aa7.38□□□□□ -1.23
ERCC4-204ENST00000573018 CRTC2Q53ET0 693 aaPredicted RBP7.38□□□□□ -1.23
ERCC4-204ENST00000573018 AGGF1Q8N302 714 aaeCLIP7.38□□□□□ -1.23
ERCC4-204ENST00000573018 PLD4Q96BZ4 506 aa7.38□□□□□ -1.23
ERCC4-204ENST00000573018 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
ERCC4-204ENST00000573018 QTRT2Q9H974 415 aaKnown RBP7.38□□□□□ -1.23
ERCC4-204ENST00000573018 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
ERCC4-204ENST00000573018 NRLP54845 237 aa7.37□□□□□ -1.23
ERCC4-204ENST00000573018 IL22RA1Q8N6P7 574 aa7.37□□□□□ -1.23
ERCC4-204ENST00000573018 NSUN5Q96P11 429 aaKnown RBP7.37□□□□□ -1.23
ERCC4-204ENST00000573018 MAFBQ9Y5Q3 323 aaPredicted RBP7.37□□□□□ -1.23
ERCC4-204ENST00000573018 GLB1P16278 677 aa7.36□□□□□ -1.23
ERCC4-204ENST00000573018 ARID4AP29374 1257 aaPredicted RBP7.36□□□□□ -1.23
ERCC4-204ENST00000573018 CD97P48960 835 aa7.36□□□□□ -1.23
ERCC4-204ENST00000573018 TLR7Q9NYK1 1049 aaKnown RBP7.36□□□□□ -1.23
ERCC4-204ENST00000573018 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
ERCC4-204ENST00000573018 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
ERCC4-204ENST00000573018 MED26O95402 600 aa7.35□□□□□ -1.23
ERCC4-204ENST00000573018 IRAK1P51617 712 aa7.35□□□□□ -1.23
ERCC4-204ENST00000573018 PTK7Q13308 1070 aa7.35□□□□□ -1.23
ERCC4-204ENST00000573018 CMTR1Q8N1G2 835 aaKnown RBP7.35□□□□□ -1.23
ERCC4-204ENST00000573018 TMEM130Q8N3G9 435 aa7.35□□□□□ -1.23
ERCC4-204ENST00000573018 LOC102724428A0A0B4J2F2 783 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 OPLAHO14841 1288 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 XYLBO75191 536 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 TGFB1P01137 390 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 GHRHP01286 108 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 SIK1P57059 783 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 RGL4Q8IZJ4 473 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 GLMNQ92990 594 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 VTI1AQ96AJ9 217 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 RAXQ9Y2V3 346 aa7.34□□□□□ -1.23
ERCC4-204ENST00000573018 USP17L15C9J2P7 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L10C9JJH3 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L13C9JLJ4 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L12C9JPN9 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L11C9JVI0 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L21D6R901 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L18D6R9N7 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L22D6RA61 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L17D6RBQ6 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L19D6RCP7 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L20D6RJB6 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 PSAPP07602 524 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 USP17L24Q0WX57 530 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 C11orf91Q3C1V1 193 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 SLC51AQ86UW1 340 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 C11orf16Q9NQ32 467 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 TRIM33Q9UPN9 1127 aa7.33□□□□□ -1.24
ERCC4-204ENST00000573018 OAS3Q9Y6K5 1087 aaKnown RBP7.33□□□□□ -1.24
ERCC4-204ENST00000573018 MMP20O60882 483 aa7.32□□□□□ -1.24
ERCC4-204ENST00000573018 IGLV1-40P01703 118 aa7.32□□□□□ -1.24
ERCC4-204ENST00000573018 TXKP42681 527 aa7.32□□□□□ -1.24
ERCC4-204ENST00000573018 Q6ZS46 218 aa7.32□□□□□ -1.24
ERCC4-204ENST00000573018 ANKMY2Q8IV38 441 aa7.32□□□□□ -1.24
ERCC4-204ENST00000573018 UBL7Q96S82 380 aaPredicted RBP7.32□□□□□ -1.24
ERCC4-204ENST00000573018 LRFN2Q9ULH4 789 aa7.32□□□□□ -1.24
ERCC4-204ENST00000573018 COBLO75128 1261 aa7.31□□□□□ -1.24
ERCC4-204ENST00000573018 EGFRP00533 1210 aa7.31□□□□□ -1.24
ERCC4-204ENST00000573018 TAL1P17542 331 aaPredicted RBP7.31□□□□□ -1.24
ERCC4-204ENST00000573018 GP2P55259 537 aaKnown RBP7.31□□□□□ -1.24
ERCC4-204ENST00000573018 FLIIQ13045 1269 aa7.31□□□□□ -1.24
ERCC4-204ENST00000573018 KANK4Q5T7N3 995 aaPredicted RBP7.31□□□□□ -1.24
ERCC4-204ENST00000573018 TREML1Q86YW5 311 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms