RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 GMPSP49915 693 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 GRAPQ13588 217 aa12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 TNIP1Q15025 636 aa12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 CYP4F22Q6NT55 531 aa12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 PGAP2Q9UHJ9 254 aa12.92□□□□□ -0.34
TRAPPC1-205ENST00000572656 CHL1O00533 1208 aa12.91□□□□□ -0.34
TRAPPC1-205ENST00000572656 TMC4Q7Z404 712 aa12.91□□□□□ -0.34
TRAPPC1-205ENST00000572656 ZC3H15Q8WU90 426 aaKnown RBP12.91□□□□□ -0.34
TRAPPC1-205ENST00000572656 BCL2L13Q9BXK5 485 aa12.91□□□□□ -0.34
TRAPPC1-205ENST00000572656 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
TRAPPC1-205ENST00000572656 RAD17O75943 681 aa12.9□□□□□ -0.34
TRAPPC1-205ENST00000572656 CELF2O95319 508 aaKnown RBP12.9□□□□□ -0.34
TRAPPC1-205ENST00000572656 MAP2K2P36507 400 aa12.9□□□□□ -0.34
TRAPPC1-205ENST00000572656 GRM1Q13255 1194 aa12.9□□□□□ -0.34
TRAPPC1-205ENST00000572656 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.34
TRAPPC1-205ENST00000572656 ABHD8Q96I13 439 aa12.9□□□□□ -0.34
TRAPPC1-205ENST00000572656 HIRAP54198 1017 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC1-205ENST00000572656 NEUROD2Q15784 382 aa12.89□□□□□ -0.35
TRAPPC1-205ENST00000572656 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
TRAPPC1-205ENST00000572656 HHIPL1Q96JK4 782 aa12.89□□□□□ -0.35
TRAPPC1-205ENST00000572656 GLIS2Q9BZE0 524 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC1-205ENST00000572656 CHPF2Q9P2E5 772 aa12.89□□□□□ -0.35
TRAPPC1-205ENST00000572656 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 AOC2O75106 756 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 HOXB7P09629 217 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 CDC37L1Q7L3B6 337 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 CNOT7Q9UIV1 285 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-205ENST00000572656 H7C1D1 291 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 HDGFL1Q5TGJ6 251 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 RUNDC1Q96C34 613 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 ISCA1Q9BUE6 129 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 DBF4Q9UBU7 674 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 THSD7BQ9C0I4 1608 aa12.87□□□□□ -0.35
TRAPPC1-205ENST00000572656 CA12O43570 354 aa12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 DPF2Q92785 391 aa12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 ZNF428Q96B54 188 aa12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
TRAPPC1-205ENST00000572656 SHTN1A0MZ66 631 aa12.85□□□□□ -0.35
TRAPPC1-205ENST00000572656 ATP5J2-PTCD1G3V325 749 aa12.85□□□□□ -0.35
TRAPPC1-205ENST00000572656 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC1-205ENST00000572656 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
TRAPPC1-205ENST00000572656 USP48Q86UV5 1035 aa12.85□□□□□ -0.35
TRAPPC1-205ENST00000572656 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
TRAPPC1-205ENST00000572656 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC1-205ENST00000572656 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 PSMD14O00487 310 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 GPSM2P81274 684 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 WDR43Q15061 677 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 EYA3Q99504 573 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 DBNDD1Q9H9R9 158 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 POLLQ9UGP5 575 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 DUOX1Q9NRD9 1551 aa12.84□□□□□ -0.35
TRAPPC1-205ENST00000572656 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC1-205ENST00000572656 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
TRAPPC1-205ENST00000572656 RPS12P25398 132 aaKnown RBP12.83□□□□□ -0.36
TRAPPC1-205ENST00000572656 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
TRAPPC1-205ENST00000572656 DUSP27Q5VZP5 1158 aa12.83□□□□□ -0.36
TRAPPC1-205ENST00000572656 SAMD7Q7Z3H4 446 aa12.83□□□□□ -0.36
TRAPPC1-205ENST00000572656 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
TRAPPC1-205ENST00000572656 CCDC85CA6NKD9 419 aa12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 ECE2O60344 883 aa12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 HUNKP57058 714 aa12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 NOGQ13253 232 aa12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 TBC1D10BQ4KMP7 808 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 RTL5Q5HYW3 569 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 TBC1D16Q8TBP0 767 aa12.82□□□□□ -0.36
TRAPPC1-205ENST00000572656 ANKRD36CQ5JPF3 1778 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 EGFRP00533 1210 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 DLK2Q6UY11 383 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 ZC3H12CQ9C0D7 883 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 KCNQ5Q9NR82 932 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 MBIPQ9NS73 344 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
TRAPPC1-205ENST00000572656 LAMB2P55268 1798 aa12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms