RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 CCDC30Q5VVM6 783 aa22.38■■□□□ 1.17
LITAF-211ENST00000572255 MPNDQ8N594 471 aa22.38■■□□□ 1.17
LITAF-211ENST00000572255 TSR2Q969E8 191 aaKnown RBP22.38■■□□□ 1.17
LITAF-211ENST00000572255 CHMP4AQ9BY43 222 aa22.38■■□□□ 1.17
LITAF-211ENST00000572255 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
LITAF-211ENST00000572255 LTBP1Q14766 1721 aa22.37■■□□□ 1.17
LITAF-211ENST00000572255 ANP32CO43423 234 aa22.37■■□□□ 1.17
LITAF-211ENST00000572255 SF3B3Q15393 1217 aaKnown RBP22.37■■□□□ 1.17
LITAF-211ENST00000572255 TMC4Q7Z404 712 aa22.37■■□□□ 1.17
LITAF-211ENST00000572255 PNMA8AQ86V59 439 aaPredicted RBP22.37■■□□□ 1.17
LITAF-211ENST00000572255 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
LITAF-211ENST00000572255 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
LITAF-211ENST00000572255 CLEC11AQ9Y240 323 aa22.37■■□□□ 1.17
LITAF-211ENST00000572255 IRS4O14654 1257 aaPredicted RBP22.36■■□□□ 1.17
LITAF-211ENST00000572255 MYD88Q99836 296 aa22.36■■□□□ 1.17
LITAF-211ENST00000572255 CREBZFQ9NS37 354 aa22.36■■□□□ 1.17
LITAF-211ENST00000572255 PASKQ96RG2 1323 aa22.35■■□□□ 1.17
LITAF-211ENST00000572255 PCNTO95613 3336 aa22.35■■□□□ 1.17
LITAF-211ENST00000572255 LMOD1P29536 600 aaPredicted RBP22.35■■□□□ 1.17
LITAF-211ENST00000572255 DUOX1Q9NRD9 1551 aa22.34■■□□□ 1.17
LITAF-211ENST00000572255 COL4A1P02462 1669 aa22.34■■□□□ 1.17
LITAF-211ENST00000572255 DDX58O95786 925 aaKnown RBP22.34■■□□□ 1.17
LITAF-211ENST00000572255 ITGBL1O95965 494 aaPredicted RBP22.34■■□□□ 1.17
LITAF-211ENST00000572255 SCNN1DP51172 638 aa22.34■■□□□ 1.17
LITAF-211ENST00000572255 ZBTB38Q8NAP3 1195 aaPredicted RBP22.34■■□□□ 1.17
LITAF-211ENST00000572255 CELF1Q92879 486 aaKnown RBP22.34■■□□□ 1.17
LITAF-211ENST00000572255 ZNRF3Q9ULT6 936 aa22.34■■□□□ 1.17
LITAF-211ENST00000572255 KIAA2012Q0VF49 1180 aa22.33■■□□□ 1.17
LITAF-211ENST00000572255 CCDC191Q8NCU4 936 aa22.33■■□□□ 1.17
LITAF-211ENST00000572255 IL16Q14005 1332 aa22.32■■□□□ 1.16
LITAF-211ENST00000572255 EPS15P42566 896 aa22.32■■□□□ 1.16
LITAF-211ENST00000572255 NCBP3Q53F19 620 aaKnown RBP22.32■■□□□ 1.16
LITAF-211ENST00000572255 METTL22Q9BUU2 404 aaPredicted RBP22.32■■□□□ 1.16
LITAF-211ENST00000572255 CXCL9Q07325 125 aa22.31■■□□□ 1.16
LITAF-211ENST00000572255 IFFO2Q5TF58 517 aa22.31■■□□□ 1.16
LITAF-211ENST00000572255 MAP1SQ66K74 1059 aaPredicted RBP22.31■■□□□ 1.16
LITAF-211ENST00000572255 CWC25Q9NXE8 425 aaPredicted RBP22.31■■□□□ 1.16
LITAF-211ENST00000572255 PCCAP05165 728 aaPredicted RBP22.3■■□□□ 1.16
LITAF-211ENST00000572255 HSP90B1P14625 803 aaKnown RBP22.3■■□□□ 1.16
LITAF-211ENST00000572255 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
LITAF-211ENST00000572255 CNTROBQ8N137 903 aa22.3■■□□□ 1.16
LITAF-211ENST00000572255 STK31Q9BXU1 1019 aa22.3■■□□□ 1.16
LITAF-211ENST00000572255 MAP3K2Q9Y2U5 619 aa22.3■■□□□ 1.16
LITAF-211ENST00000572255 MKRN1Q9UHC7 482 aaKnown RBP22.29■■□□□ 1.16
LITAF-211ENST00000572255 TMEM88BA6NKF7 163 aa22.28■■□□□ 1.16
LITAF-211ENST00000572255 RPS8P62241 208 aaKnown RBP22.28■■□□□ 1.16
LITAF-211ENST00000572255 CIAPIN1Q6FI81 312 aa22.28■■□□□ 1.16
LITAF-211ENST00000572255 KSR2Q6VAB6 950 aa22.28■■□□□ 1.16
LITAF-211ENST00000572255 JARID2Q92833 1246 aaPredicted RBP22.28■■□□□ 1.16
LITAF-211ENST00000572255 GPRC5DQ9NZD1 345 aa22.28■■□□□ 1.16
LITAF-211ENST00000572255 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
LITAF-211ENST00000572255 PI4KAP2A4QPH2 592 aa22.27■■□□□ 1.16
LITAF-211ENST00000572255 RAD17O75943 681 aa22.27■■□□□ 1.16
LITAF-211ENST00000572255 GMPSP49915 693 aaPredicted RBP22.27■■□□□ 1.16
LITAF-211ENST00000572255 GPSM2P81274 684 aa22.27■■□□□ 1.16
LITAF-211ENST00000572255 USP50Q70EL3 339 aaPredicted RBP22.27■■□□□ 1.16
LITAF-211ENST00000572255 PI4KAP1Q8N8J0 262 aa22.27■■□□□ 1.16
LITAF-211ENST00000572255 CNTNAP1P78357 1384 aa22.26■■□□□ 1.15
LITAF-211ENST00000572255 PDE8AO60658 829 aa22.26■■□□□ 1.15
LITAF-211ENST00000572255 TNIP1Q15025 636 aa22.26■■□□□ 1.15
LITAF-211ENST00000572255 WASHC4Q2M389 1173 aa22.26■■□□□ 1.15
LITAF-211ENST00000572255 SEC31BQ9NQW1 1179 aa22.26■■□□□ 1.15
LITAF-211ENST00000572255 SALL2Q9Y467 1007 aaPredicted RBP22.26■■□□□ 1.15
LITAF-211ENST00000572255 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
LITAF-211ENST00000572255 YDJCA8MPS7 323 aa22.25■■□□□ 1.15
LITAF-211ENST00000572255 C6orf229H3BNL8 230 aa22.25■■□□□ 1.15
LITAF-211ENST00000572255 IGKV5-2P06315 115 aa22.25■■□□□ 1.15
LITAF-211ENST00000572255 CCDC152Q4G0S7 254 aa22.25■■□□□ 1.15
LITAF-211ENST00000572255 G2E3Q7L622 706 aa22.25■■□□□ 1.15
LITAF-211ENST00000572255 ADARB2Q9NS39 739 aaKnown RBP22.25■■□□□ 1.15
LITAF-211ENST00000572255 POLLQ9UGP5 575 aa22.25■■□□□ 1.15
LITAF-211ENST00000572255 SLC4A2P04920 1241 aa22.24■■□□□ 1.15
LITAF-211ENST00000572255 HSPA1AP0DMV8 641 aaKnown RBP22.24■■□□□ 1.15
LITAF-211ENST00000572255 HSPA1BP0DMV9 641 aaKnown RBP22.24■■□□□ 1.15
LITAF-211ENST00000572255 NEXNQ0ZGT2 675 aa22.24■■□□□ 1.15
LITAF-211ENST00000572255 WDR63Q8IWG1 891 aa22.24■■□□□ 1.15
LITAF-211ENST00000572255 CDHR2Q9BYE9 1310 aa22.24■■□□□ 1.15
LITAF-211ENST00000572255 RIMBP2O15034 1052 aa22.23■■□□□ 1.15
LITAF-211ENST00000572255 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
LITAF-211ENST00000572255 BCL2L13Q9BXK5 485 aa22.23■■□□□ 1.15
LITAF-211ENST00000572255 MYH3P11055 1940 aa22.22■■□□□ 1.15
LITAF-211ENST00000572255 CACNA1FO60840 1977 aa22.22■■□□□ 1.15
LITAF-211ENST00000572255 TBC1D16Q8TBP0 767 aa22.22■■□□□ 1.15
LITAF-211ENST00000572255 EYA3Q99504 573 aa22.22■■□□□ 1.15
LITAF-211ENST00000572255 DBNDD1Q9H9R9 158 aa22.22■■□□□ 1.15
LITAF-211ENST00000572255 CWF19L2Q2TBE0 894 aaKnown RBP22.21■■□□□ 1.15
LITAF-211ENST00000572255 GPR101Q96P66 508 aaPredicted RBP22.21■■□□□ 1.15
LITAF-211ENST00000572255 PODXL2Q9NZ53 605 aa22.21■■□□□ 1.15
LITAF-211ENST00000572255 NEURL1BA8MQ27 555 aa22.2■■□□□ 1.14
LITAF-211ENST00000572255 CTSWP56202 376 aa22.2■■□□□ 1.14
LITAF-211ENST00000572255 FLIIQ13045 1269 aa22.2■■□□□ 1.14
LITAF-211ENST00000572255 TRPM7Q96QT4 1865 aa22.2■■□□□ 1.14
LITAF-211ENST00000572255 ECE2O60344 883 aa22.19■■□□□ 1.14
LITAF-211ENST00000572255 VEGFBP49765 207 aa22.19■■□□□ 1.14
LITAF-211ENST00000572255 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
LITAF-211ENST00000572255 FMR1Q06787 632 aaKnown RBP eCLIP22.19■■□□□ 1.14
LITAF-211ENST00000572255 DOK7Q18PE1 504 aa22.19■■□□□ 1.14
LITAF-211ENST00000572255 COL13A1Q5TAT6 717 aaPredicted RBP22.19■■□□□ 1.14
LITAF-211ENST00000572255 ANKRD18AQ8IVF6 992 aa22.19■■□□□ 1.14
LITAF-211ENST00000572255 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms