RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-215	ENST00000571945	BEND3	Q5T5X7	828 aa		32.17	■■■□□ 2.74
ABR-215	ENST00000571945	GRAP	Q13588	217 aa		32.16	■■■□□ 2.74
ABR-215	ENST00000571945	GRAPL	Q8TC17	118 aa	Predicted RBP	32.16	■■■□□ 2.74
ABR-215	ENST00000571945	BBOX1	O75936	387 aa		32.15	■■■□□ 2.74
ABR-215	ENST00000571945	BCL2L13	Q9BXK5	485 aa		32.15	■■■□□ 2.74
ABR-215	ENST00000571945		H7C1W4	665 aa		32.14	■■■□□ 2.74
ABR-215	ENST00000571945	BRPF1	P55201	1214 aa	Predicted RBP	32.14	■■■□□ 2.74
ABR-215	ENST00000571945	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.14	■■■□□ 2.74
ABR-215	ENST00000571945	TMC4	Q7Z404	712 aa		32.14	■■■□□ 2.74
ABR-215	ENST00000571945	UBE3B	Q7Z3V4	1068 aa		32.13	■■■□□ 2.73
ABR-215	ENST00000571945	ATP6V0A2	Q9Y487	856 aa		32.13	■■■□□ 2.73
ABR-215	ENST00000571945	ALDH1L1	O75891	902 aa		32.12	■■■□□ 2.73
ABR-215	ENST00000571945	PRELP	P51888	382 aa		32.12	■■■□□ 2.73
ABR-215	ENST00000571945	CCDC152	Q4G0S7	254 aa		32.12	■■■□□ 2.73
ABR-215	ENST00000571945	OLFM4	Q6UX06	510 aa		32.12	■■■□□ 2.73
ABR-215	ENST00000571945	JARID2	Q92833	1246 aa	Predicted RBP	32.11	■■■□□ 2.73
ABR-215	ENST00000571945	PSMD1	Q99460	953 aa		32.11	■■■□□ 2.73
ABR-215	ENST00000571945	TMX4	Q9H1E5	349 aa	Predicted RBP	32.11	■■■□□ 2.73
ABR-215	ENST00000571945	RARS	P54136	660 aa	Known RBP	32.1	■■■□□ 2.73
ABR-215	ENST00000571945	CASP7	P55210	303 aa		32.1	■■■□□ 2.73
ABR-215	ENST00000571945	CTSW	P56202	376 aa		32.1	■■■□□ 2.73
ABR-215	ENST00000571945	PLA2G12B	Q9BX93	195 aa		32.1	■■■□□ 2.73
ABR-215	ENST00000571945	COL4A1	P02462	1669 aa		32.1	■■■□□ 2.73
ABR-215	ENST00000571945	RTL9	Q8NET4	1388 aa		32.09	■■■□□ 2.73
ABR-215	ENST00000571945	SLC4A10	Q6U841	1118 aa		32.09	■■■□□ 2.73
ABR-215	ENST00000571945	SRCIN1	Q9C0H9	1055 aa		32.09	■■■□□ 2.73
ABR-215	ENST00000571945	KIF16B	Q96L93	1317 aa		32.08	■■■□□ 2.73
ABR-215	ENST00000571945	SP8	Q8IXZ3	490 aa		32.08	■■■□□ 2.73
ABR-215	ENST00000571945	CELF1	Q92879	486 aa	Known RBP	32.06	■■■□□ 2.72
ABR-215	ENST00000571945	LTBP1	Q14766	1721 aa		32.06	■■■□□ 2.72
ABR-215	ENST00000571945	GRM8	O00222	908 aa		32.05	■■■□□ 2.72
ABR-215	ENST00000571945	SPEF2	Q9C093	1822 aa		32.05	■■■□□ 2.72
ABR-215	ENST00000571945	TTLL11	Q8NHH1	800 aa		32.04	■■■□□ 2.72
ABR-215	ENST00000571945	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.03	■■■□□ 2.72
ABR-215	ENST00000571945	DUOX1	Q9NRD9	1551 aa		32.02	■■■□□ 2.72
ABR-215	ENST00000571945	RPS8	P62241	208 aa	Known RBP	32.02	■■■□□ 2.72
ABR-215	ENST00000571945	SLC51A	Q86UW1	340 aa		32.02	■■■□□ 2.72
ABR-215	ENST00000571945	API5	Q9BZZ5	524 aa	Known RBP	32.02	■■■□□ 2.72
ABR-215	ENST00000571945	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.02	■■■□□ 2.72
ABR-215	ENST00000571945	IARS	P41252	1262 aa	Known RBP	32.01	■■■□□ 2.71
ABR-215	ENST00000571945	CDC5L	Q99459	802 aa	Known RBP	32.01	■■■□□ 2.71
ABR-215	ENST00000571945	SEC31B	Q9NQW1	1179 aa		32.01	■■■□□ 2.71
ABR-215	ENST00000571945	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.01	■■■□□ 2.71
ABR-215	ENST00000571945	RTFDC1	Q9BY42	306 aa	Predicted RBP	32	■■■□□ 2.71
ABR-215	ENST00000571945	NOB1	Q9ULX3	412 aa	Known RBP	32	■■■□□ 2.71
ABR-215	ENST00000571945	UTY	O14607	1347 aa		32	■■■□□ 2.71
ABR-215	ENST00000571945	KDM2B	Q8NHM5	1336 aa		32	■■■□□ 2.71
ABR-215	ENST00000571945	DPP8	Q6V1X1	898 aa	Predicted RBP	31.99	■■■□□ 2.71
ABR-215	ENST00000571945	SUPT20H	Q8NEM7	779 aa		31.99	■■■□□ 2.71
ABR-215	ENST00000571945	ARHGAP45	Q92619	1136 aa		31.99	■■■□□ 2.71
ABR-215	ENST00000571945	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.99	■■■□□ 2.71
ABR-215	ENST00000571945	CSF1R	P07333	972 aa		31.98	■■■□□ 2.71
ABR-215	ENST00000571945	MPND	Q8N594	471 aa		31.98	■■■□□ 2.71
ABR-215	ENST00000571945	ZNF526	Q8TF50	670 aa	Predicted RBP	31.98	■■■□□ 2.71
ABR-215	ENST00000571945	VPS33B	Q9H267	617 aa		31.98	■■■□□ 2.71
ABR-215	ENST00000571945	GREM2	Q9H772	168 aa		31.98	■■■□□ 2.71
ABR-215	ENST00000571945	ANKRD18A	Q8IVF6	992 aa		31.97	■■■□□ 2.71
ABR-215	ENST00000571945	WDR90	Q96KV7	1748 aa		31.95	■■■□□ 2.71
ABR-215	ENST00000571945	CCT4	P50991	539 aa	Known RBP	31.95	■■■□□ 2.71
ABR-215	ENST00000571945	COL4A5	P29400	1685 aa		31.95	■■■□□ 2.7
ABR-215	ENST00000571945	GLTPD2	A6NH11	291 aa		31.94	■■■□□ 2.7
ABR-215	ENST00000571945	FOXO4	P98177	505 aa		31.94	■■■□□ 2.7
ABR-215	ENST00000571945	FAM161A	Q3B820	660 aa		31.94	■■■□□ 2.7
ABR-215	ENST00000571945	IPO8	O15397	1037 aa	Known RBP	31.93	■■■□□ 2.7
ABR-215	ENST00000571945	ITGA6	P23229	1130 aa		31.92	■■■□□ 2.7
ABR-215	ENST00000571945	JDP2	Q8WYK2	163 aa		31.92	■■■□□ 2.7
ABR-215	ENST00000571945	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.91	■■■□□ 2.7
ABR-215	ENST00000571945	DPY19L2	Q6NUT2	758 aa		31.91	■■■□□ 2.7
ABR-215	ENST00000571945	LARGE2	Q8N3Y3	721 aa		31.91	■■■□□ 2.7
ABR-215	ENST00000571945	PODXL2	Q9NZ53	605 aa		31.91	■■■□□ 2.7
ABR-215	ENST00000571945		A0A1B0GUL6	1792 aa		31.9	■■■□□ 2.7
ABR-215	ENST00000571945	PPIP5K2	O43314	1243 aa		31.9	■■■□□ 2.7
ABR-215	ENST00000571945	BCAR3	O75815	825 aa		31.9	■■■□□ 2.7
ABR-215	ENST00000571945	BSDC1	Q9NW68	430 aa	Predicted RBP	31.9	■■■□□ 2.7
ABR-215	ENST00000571945	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.9	■■■□□ 2.7
ABR-215	ENST00000571945	FZD9	O00144	591 aa		31.89	■■■□□ 2.7
ABR-215	ENST00000571945	IGHMBP2	P38935	993 aa	Known RBP	31.89	■■■□□ 2.7
ABR-215	ENST00000571945	GPSM2	P81274	684 aa		31.89	■■■□□ 2.7
ABR-215	ENST00000571945	SUCLG2	Q96I99	432 aa		31.89	■■■□□ 2.7
ABR-215	ENST00000571945	KIAA2012	Q0VF49	1180 aa		31.88	■■■□□ 2.69
ABR-215	ENST00000571945	EPHA10	Q5JZY3	1008 aa		31.88	■■■□□ 2.69
ABR-215	ENST00000571945	USP44	Q9H0E7	712 aa		31.88	■■■□□ 2.69
ABR-215	ENST00000571945	ANKRD18B	A2A2Z9	1011 aa		31.87	■■■□□ 2.69
ABR-215	ENST00000571945	AOC3	Q16853	763 aa		31.87	■■■□□ 2.69
ABR-215	ENST00000571945	LMBR1L	Q6UX01	489 aa		31.87	■■■□□ 2.69
ABR-215	ENST00000571945	ATF7IP	Q6VMQ6	1270 aa		31.87	■■■□□ 2.69
ABR-215	ENST00000571945	NIM1K	Q8IY84	436 aa		31.87	■■■□□ 2.69
ABR-215	ENST00000571945	NMRK2	Q9NPI5	230 aa		31.87	■■■□□ 2.69
ABR-215	ENST00000571945	SCN4A	P35499	1836 aa		31.86	■■■□□ 2.69
ABR-215	ENST00000571945	XDH	P47989	1333 aa		31.86	■■■□□ 2.69
ABR-215	ENST00000571945	KIF3C	O14782	793 aa		31.86	■■■□□ 2.69
ABR-215	ENST00000571945	TRIM27	P14373	513 aa		31.86	■■■□□ 2.69
ABR-215	ENST00000571945	IFIT5	Q13325	482 aa	Known RBP	31.86	■■■□□ 2.69
ABR-215	ENST00000571945	KAZALD1	Q96I82	304 aa		31.86	■■■□□ 2.69
ABR-215	ENST00000571945	ZNF541	Q9H0D2	1346 aa		31.85	■■■□□ 2.69
ABR-215	ENST00000571945	RABL6	Q3YEC7	729 aa	Predicted RBP	31.85	■■■□□ 2.69
ABR-215	ENST00000571945	EYA3	Q99504	573 aa		31.85	■■■□□ 2.69
ABR-215	ENST00000571945	ANKIB1	Q9P2G1	1089 aa		31.85	■■■□□ 2.69
ABR-215	ENST00000571945	CHMP3	Q9Y3E7	222 aa		31.85	■■■□□ 2.69
ABR-215	ENST00000571945	INTS3	Q68E01	1043 aa	Known RBP	31.84	■■■□□ 2.69

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