RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-213ENST00000571886 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-213ENST00000571886 SEC31BQ9NQW1 1179 aa13.09□□□□□ -0.31
GTF3C1-213ENST00000571886 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
GTF3C1-213ENST00000571886 POTECB2RU33 542 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 PDE8AO60658 829 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 BBOX1O75936 387 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 CASP7P55210 303 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 NEXNQ0ZGT2 675 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 GCKRQ14397 625 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 SP8Q8IXZ3 490 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 PSMD1Q99460 953 aa13.08□□□□□ -0.32
GTF3C1-213ENST00000571886 DDNO94850 711 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-213ENST00000571886 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
GTF3C1-213ENST00000571886 CC2D2BQ6DHV5 1058 aa13.07□□□□□ -0.32
GTF3C1-213ENST00000571886 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
GTF3C1-213ENST00000571886 BCL2L13Q9BXK5 485 aa13.07□□□□□ -0.32
GTF3C1-213ENST00000571886 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
GTF3C1-213ENST00000571886 ZC3H4Q9UPT8 1303 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-213ENST00000571886 UBE3BQ7Z3V4 1068 aa13.06□□□□□ -0.32
GTF3C1-213ENST00000571886 LINS1Q8NG48 757 aa13.06□□□□□ -0.32
GTF3C1-213ENST00000571886 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
GTF3C1-213ENST00000571886 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
GTF3C1-213ENST00000571886 MYH3P11055 1940 aa13.05□□□□□ -0.32
GTF3C1-213ENST00000571886 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-213ENST00000571886 MPNDQ8N594 471 aa13.05□□□□□ -0.32
GTF3C1-213ENST00000571886 TTLL11Q8NHH1 800 aa13.05□□□□□ -0.32
GTF3C1-213ENST00000571886 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-213ENST00000571886 FZD9O00144 591 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 CTSWP56202 376 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 GPSM2P81274 684 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 AOC3Q16853 763 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 SLC4A10Q6U841 1118 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 GREM2Q9H772 168 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 LRRC37AA6NMS7 1700 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 WDR90Q96KV7 1748 aa13.04□□□□□ -0.32
GTF3C1-213ENST00000571886 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 HNRNPUQ00839 825 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 GPR101Q96P66 508 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 PLA2G12BQ9BX93 195 aa13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 POLLQ9UGP5 575 aa13.03□□□□□ -0.32
GTF3C1-213ENST00000571886 SPEF2Q9C093 1822 aa13.02□□□□□ -0.32
GTF3C1-213ENST00000571886 WTIPA6NIX2 430 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-213ENST00000571886 PPIP5K2O43314 1243 aa13.02□□□□□ -0.33
GTF3C1-213ENST00000571886 TOMM70O94826 608 aa13.02□□□□□ -0.33
GTF3C1-213ENST00000571886 FOXO4P98177 505 aa13.02□□□□□ -0.33
GTF3C1-213ENST00000571886 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.33
GTF3C1-213ENST00000571886 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
GTF3C1-213ENST00000571886 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-213ENST00000571886 CSF1RP07333 972 aa13.01□□□□□ -0.33
GTF3C1-213ENST00000571886 HSP90B1P14625 803 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-213ENST00000571886 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-213ENST00000571886 ALDH1L2Q3SY69 923 aa13.01□□□□□ -0.33
GTF3C1-213ENST00000571886 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
GTF3C1-213ENST00000571886 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-213ENST00000571886 LTBP1Q14766 1721 aa13.01□□□□□ -0.33
GTF3C1-213ENST00000571886 RIMBP2O15034 1052 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 POTEIP0CG38 1075 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 POTEJP0CG39 1038 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 FAM161AQ3B820 660 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 JDP2Q8WYK2 163 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 SMC4Q9NTJ3 1288 aa13□□□□□ -0.33
GTF3C1-213ENST00000571886 PTPRCP08575 1304 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 GRM8O00222 908 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 ALDH1L1O75891 902 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 NBPF7P0C2Y1 421 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 ITGA6P23229 1130 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 RARSP54136 660 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 KIAA2012Q0VF49 1180 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 SUPT20HQ8NEM7 779 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 NOB1Q9ULX3 412 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-213ENST00000571886 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 EIF6P56537 245 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 CXCL9Q07325 125 aa12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 C16orf71Q8IYS4 520 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 RBM46Q8TBY0 533 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 VPS33BQ9H267 617 aa12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 KCNQ5Q9NR82 932 aa12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 PODXL2Q9NZ53 605 aa12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 MINPP1Q9UNW1 487 aa12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 GJA3Q9Y6H8 435 aa12.98□□□□□ -0.33
GTF3C1-213ENST00000571886 BCAR3O75815 825 aa12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 CT47B1P0C2W7 299 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms