RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 LMOD1P29536 600 aaPredicted RBP21.48■■□□□ 1.03
RAB40B-205ENST00000571880 EPS15P42566 896 aa21.48■■□□□ 1.03
RAB40B-205ENST00000571880 SCNN1DP51172 638 aa21.48■■□□□ 1.03
RAB40B-205ENST00000571880 GOLGA2Q08379 1002 aa21.48■■□□□ 1.03
RAB40B-205ENST00000571880 RIC3Q7Z5B4 369 aa21.48■■□□□ 1.03
RAB40B-205ENST00000571880 TSPYL6Q8N831 410 aa21.48■■□□□ 1.03
RAB40B-205ENST00000571880 JARID2Q92833 1246 aaPredicted RBP21.48■■□□□ 1.03
RAB40B-205ENST00000571880 MYD88Q99836 296 aa21.48■■□□□ 1.03
RAB40B-205ENST00000571880 HSPA1AP0DMV8 641 aaKnown RBP21.47■■□□□ 1.03
RAB40B-205ENST00000571880 HSPA1BP0DMV9 641 aaKnown RBP21.47■■□□□ 1.03
RAB40B-205ENST00000571880 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
RAB40B-205ENST00000571880 MPNDQ8N594 471 aa21.47■■□□□ 1.03
RAB40B-205ENST00000571880 CELF1Q92879 486 aaKnown RBP21.47■■□□□ 1.03
RAB40B-205ENST00000571880 CREBZFQ9NS37 354 aa21.47■■□□□ 1.03
RAB40B-205ENST00000571880 GRIPAP1Q4V328 841 aa21.46■■□□□ 1.03
RAB40B-205ENST00000571880 SCN9AQ15858 1988 aa21.46■■□□□ 1.03
RAB40B-205ENST00000571880 IRS4O14654 1257 aaPredicted RBP21.45■■□□□ 1.02
RAB40B-205ENST00000571880 BBOX1O75936 387 aa21.45■■□□□ 1.02
RAB40B-205ENST00000571880 ITGBL1O95965 494 aaPredicted RBP21.45■■□□□ 1.02
RAB40B-205ENST00000571880 FMR1Q06787 632 aaKnown RBP eCLIP21.45■■□□□ 1.02
RAB40B-205ENST00000571880 SP8Q8IXZ3 490 aa21.45■■□□□ 1.02
RAB40B-205ENST00000571880 GPR101Q96P66 508 aaPredicted RBP21.45■■□□□ 1.02
RAB40B-205ENST00000571880 COL13A1Q5TAT6 717 aaPredicted RBP21.44■■□□□ 1.02
RAB40B-205ENST00000571880 PNMA8AQ86V59 439 aaPredicted RBP21.44■■□□□ 1.02
RAB40B-205ENST00000571880 SUPT20HQ8NEM7 779 aa21.44■■□□□ 1.02
RAB40B-205ENST00000571880 CCDC85AQ96PX6 553 aaPredicted RBP21.44■■□□□ 1.02
RAB40B-205ENST00000571880 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
RAB40B-205ENST00000571880 RAD17O75943 681 aa21.43■■□□□ 1.02
RAB40B-205ENST00000571880 CXCL9Q07325 125 aa21.43■■□□□ 1.02
RAB40B-205ENST00000571880 CNTROBQ8N137 903 aa21.43■■□□□ 1.02
RAB40B-205ENST00000571880 RTFDC1Q9BY42 306 aaPredicted RBP21.43■■□□□ 1.02
RAB40B-205ENST00000571880 SALL2Q9Y467 1007 aaPredicted RBP21.43■■□□□ 1.02
RAB40B-205ENST00000571880 CNTNAP1P78357 1384 aa21.43■■□□□ 1.02
RAB40B-205ENST00000571880 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
RAB40B-205ENST00000571880 ZNRF3Q9ULT6 936 aa21.42■■□□□ 1.02
RAB40B-205ENST00000571880 POLR2AP24928 1970 aaKnown RBP21.41■■□□□ 1.02
RAB40B-205ENST00000571880 SHTN1A0MZ66 631 aa21.41■■□□□ 1.02
RAB40B-205ENST00000571880 TMEM88BA6NKF7 163 aa21.41■■□□□ 1.02
RAB40B-205ENST00000571880 RIMBP2O15034 1052 aa21.41■■□□□ 1.02
RAB40B-205ENST00000571880 KIAA2012Q0VF49 1180 aa21.41■■□□□ 1.02
RAB40B-205ENST00000571880 SEC31BQ9NQW1 1179 aa21.41■■□□□ 1.02
RAB40B-205ENST00000571880 CACNA1FO60840 1977 aa21.41■■□□□ 1.02
RAB40B-205ENST00000571880 YDJCA8MPS7 323 aa21.4■■□□□ 1.02
RAB40B-205ENST00000571880 TRAF5O00463 557 aa21.4■■□□□ 1.02
RAB40B-205ENST00000571880 GPSM2P81274 684 aa21.4■■□□□ 1.02
RAB40B-205ENST00000571880 SF3B3Q15393 1217 aaKnown RBP21.4■■□□□ 1.02
RAB40B-205ENST00000571880 CCDC30Q5VVM6 783 aa21.4■■□□□ 1.02
RAB40B-205ENST00000571880 GPRC5DQ9NZD1 345 aa21.4■■□□□ 1.02
RAB40B-205ENST00000571880 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
RAB40B-205ENST00000571880 PSME4Q14997 1843 aa21.39■■□□□ 1.02
RAB40B-205ENST00000571880 CIAPIN1Q6FI81 312 aa21.39■■□□□ 1.01
RAB40B-205ENST00000571880 WWC1Q8IX03 1113 aa21.39■■□□□ 1.01
RAB40B-205ENST00000571880 DBNDD1Q9H9R9 158 aa21.39■■□□□ 1.01
RAB40B-205ENST00000571880 MAP3K2Q9Y2U5 619 aa21.39■■□□□ 1.01
RAB40B-205ENST00000571880 C6orf229H3BNL8 230 aa21.38■■□□□ 1.01
RAB40B-205ENST00000571880 ZBTB38Q8NAP3 1195 aaPredicted RBP21.38■■□□□ 1.01
RAB40B-205ENST00000571880 BCL2L13Q9BXK5 485 aa21.38■■□□□ 1.01
RAB40B-205ENST00000571880 VEGFBP49765 207 aa21.37■■□□□ 1.01
RAB40B-205ENST00000571880 TRIM28Q13263 835 aaKnown RBP21.37■■□□□ 1.01
RAB40B-205ENST00000571880 G2E3Q7L622 706 aa21.37■■□□□ 1.01
RAB40B-205ENST00000571880 METTL22Q9BUU2 404 aaPredicted RBP21.37■■□□□ 1.01
RAB40B-205ENST00000571880 CWC25Q9NXE8 425 aaPredicted RBP21.37■■□□□ 1.01
RAB40B-205ENST00000571880 ABT1Q9ULW3 272 aaKnown RBP21.37■■□□□ 1.01
RAB40B-205ENST00000571880 ZNF316A6NFI3 1004 aaPredicted RBP21.36■■□□□ 1.01
RAB40B-205ENST00000571880 ANP32CO43423 234 aa21.36■■□□□ 1.01
RAB40B-205ENST00000571880 DDX58O95786 925 aaKnown RBP21.36■■□□□ 1.01
RAB40B-205ENST00000571880 DOK7Q18PE1 504 aa21.36■■□□□ 1.01
RAB40B-205ENST00000571880 TWISTNBQ3B726 338 aaPredicted RBP21.36■■□□□ 1.01
RAB40B-205ENST00000571880 TMC4Q7Z404 712 aa21.36■■□□□ 1.01
RAB40B-205ENST00000571880 TRPM4Q8TD43 1214 aa21.36■■□□□ 1.01
RAB40B-205ENST00000571880 POLLQ9UGP5 575 aa21.36■■□□□ 1.01
RAB40B-205ENST00000571880 ZBTB12Q9Y330 459 aaPredicted RBP21.36■■□□□ 1.01
RAB40B-205ENST00000571880 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
RAB40B-205ENST00000571880 CAPN15O75808 1086 aa21.35■■□□□ 1.01
RAB40B-205ENST00000571880 PCCAP05165 728 aaPredicted RBP21.35■■□□□ 1.01
RAB40B-205ENST00000571880 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
RAB40B-205ENST00000571880 GRM1Q13255 1194 aa21.35■■□□□ 1.01
RAB40B-205ENST00000571880 WASHC4Q2M389 1173 aa21.35■■□□□ 1.01
RAB40B-205ENST00000571880 USP50Q70EL3 339 aaPredicted RBP21.35■■□□□ 1.01
RAB40B-205ENST00000571880 PI4KAP1Q8N8J0 262 aa21.35■■□□□ 1.01
RAB40B-205ENST00000571880 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
RAB40B-205ENST00000571880 VPS33BQ9H267 617 aa21.35■■□□□ 1.01
RAB40B-205ENST00000571880 ADARB2Q9NS39 739 aaKnown RBP21.35■■□□□ 1.01
RAB40B-205ENST00000571880 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
RAB40B-205ENST00000571880 THSD7BQ9C0I4 1608 aa21.34■■□□□ 1.01
RAB40B-205ENST00000571880 RPS8P62241 208 aaKnown RBP21.34■■□□□ 1.01
RAB40B-205ENST00000571880 CWF19L2Q2TBE0 894 aaKnown RBP21.34■■□□□ 1.01
RAB40B-205ENST00000571880 PAXIP1Q6ZW49 1069 aaPredicted RBP21.34■■□□□ 1.01
RAB40B-205ENST00000571880 CCDC191Q8NCU4 936 aa21.34■■□□□ 1.01
RAB40B-205ENST00000571880 PSMD14O00487 310 aa21.33■■□□□ 1.01
RAB40B-205ENST00000571880 ECE2O60344 883 aa21.33■■□□□ 1.01
RAB40B-205ENST00000571880 UFL1O94874 794 aa21.33■■□□□ 1.01
RAB40B-205ENST00000571880 IGKV5-2P06315 115 aa21.33■■□□□ 1.01
RAB40B-205ENST00000571880 GLIS2Q9BZE0 524 aaPredicted RBP21.33■■□□□ 1.01
RAB40B-205ENST00000571880 KCNQ5Q9NR82 932 aa21.33■■□□□ 1.01
RAB40B-205ENST00000571880 A0A1B0GUL6 1792 aa21.33■■□□□ 1
RAB40B-205ENST00000571880 ZNF646O15015 1829 aaPredicted RBP21.32■■□□□ 1
RAB40B-205ENST00000571880 PDE8AO60658 829 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 TNIP1Q15025 636 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 CCDC27Q2M243 656 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms