RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 IDH1O75874 414 aaKnown RBP12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 SNW1Q13573 536 aaKnown RBP12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 GOLIM4O00461 696 aa12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 LUZP1Q86V48 1076 aa12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
PCDHGA4-201ENST00000571252 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 POLR3DP05423 398 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 TXLNAP40222 546 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 C17orf53Q8N3J3 647 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 AATKQ6ZMQ8 1374 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 MED14O60244 1454 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 NMIQ13287 307 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 CREB3L3Q68CJ9 461 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 DDX46Q7L014 1031 aaKnown RBP12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA4-201ENST00000571252 ALDH1L1O75891 902 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 MTMR7Q9Y216 660 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 GRM8O00222 908 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 PDE4CQ08493 712 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 PREX1Q8TCU6 1659 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 COL3A1P02461 1466 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 SGSM2O43147 1006 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 ZNF500O60304 480 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 PIP4K2BP78356 416 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 GPT2Q8TD30 523 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 USP16Q9Y5T5 823 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 SNX14Q9Y5W7 946 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 TMEM131LA2VDJ0 1609 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 SKIDA1Q1XH10 827 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 ISM2Q6H9L7 571 aa12.93□□□□□ -0.34
PCDHGA4-201ENST00000571252 DTNBO60941 627 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 AXDND1Q5T1B0 1012 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 RUFY3Q7L099 469 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 FLT4P35916 1363 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 POLR3GO15318 223 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 MYRIPQ8NFW9 859 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 EPB41L2O43491 1005 aaKnown RBP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 KSR2Q6VAB6 950 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 Q6ZUG5 572 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 ZNHIT6Q9NWK9 470 aaKnown RBP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 MYO5BQ9ULV0 1848 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 ZNF213O14771 459 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 KCNA6P17658 529 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 HAND2P61296 217 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 V9GYY5 206 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA4-201ENST00000571252 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 TDO2P48775 406 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 WASF1Q92558 559 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 RTL1A6NKG5 1358 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 RAD50Q92878 1312 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 KLHL10Q6JEL2 608 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 CNNM3Q8NE01 707 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 PALD1Q9ULE6 856 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 AKAP2Q9Y2D5 859 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 AIDAQ96BJ3 306 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 UBAC1Q9BSL1 405 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
PCDHGA4-201ENST00000571252 IGSF3O75054 1194 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 METTL24Q5JXM2 366 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 AOPEPQ8N6M6 819 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 CCDC150Q8NCX0 1101 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 SIRT1Q96EB6 747 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 RAB11FIP4Q86YS3 637 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 NLRP1Q9C000 1473 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 HSPA4P34932 840 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 CCDC82Q8N4S0 544 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 CALCOCO1Q9P1Z2 691 aa12.9□□□□□ -0.34
PCDHGA4-201ENST00000571252 CASQ1P31415 396 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms