RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
RPA1-203ENST00000571058 PCCAP05165 728 aaPredicted RBP22.13■■□□□ 1.13
RPA1-203ENST00000571058 RTFDC1Q9BY42 306 aaPredicted RBP22.13■■□□□ 1.13
RPA1-203ENST00000571058 CEP350Q5VT06 3117 aa22.13■■□□□ 1.13
RPA1-203ENST00000571058 PI4KAP2A4QPH2 592 aa22.12■■□□□ 1.13
RPA1-203ENST00000571058 LARGE2Q8N3Y3 721 aa22.12■■□□□ 1.13
RPA1-203ENST00000571058 PI4KAP1Q8N8J0 262 aa22.12■■□□□ 1.13
RPA1-203ENST00000571058 EIF6P56537 245 aaKnown RBP22.11■■□□□ 1.13
RPA1-203ENST00000571058 DPP8Q6V1X1 898 aaPredicted RBP22.11■■□□□ 1.13
RPA1-203ENST00000571058 GPC2Q8N158 579 aa22.11■■□□□ 1.13
RPA1-203ENST00000571058 MPNDQ8N594 471 aa22.11■■□□□ 1.13
RPA1-203ENST00000571058 VAMP4O75379 141 aa22.1■■□□□ 1.13
RPA1-203ENST00000571058 EXOSC9Q06265 439 aaKnown RBP22.1■■□□□ 1.13
RPA1-203ENST00000571058 RTL5Q5HYW3 569 aaPredicted RBP22.1■■□□□ 1.13
RPA1-203ENST00000571058 ZNF541Q9H0D2 1346 aa22.09■■□□□ 1.13
RPA1-203ENST00000571058 PDE8AO60658 829 aa22.09■■□□□ 1.13
RPA1-203ENST00000571058 FLIIQ13045 1269 aa22.09■■□□□ 1.13
RPA1-203ENST00000571058 NIM1KQ8IY84 436 aa22.09■■□□□ 1.13
RPA1-203ENST00000571058 ZNF428Q96B54 188 aa22.09■■□□□ 1.13
RPA1-203ENST00000571058 LRRC37AA6NMS7 1700 aa22.09■■□□□ 1.13
RPA1-203ENST00000571058 CDHR2Q9BYE9 1310 aa22.08■■□□□ 1.13
RPA1-203ENST00000571058 PPIP5K2O43314 1243 aa22.08■■□□□ 1.13
RPA1-203ENST00000571058 CCDC152Q4G0S7 254 aa22.08■■□□□ 1.13
RPA1-203ENST00000571058 TAF1P21675 1872 aa22.07■■□□□ 1.12
RPA1-203ENST00000571058 HACL1Q9UJ83 578 aa22.07■■□□□ 1.12
RPA1-203ENST00000571058 ZNF521Q96K83 1311 aa22.06■■□□□ 1.12
RPA1-203ENST00000571058 IGKV5-2P06315 115 aa22.06■■□□□ 1.12
RPA1-203ENST00000571058 RPS8P62241 208 aaKnown RBP22.06■■□□□ 1.12
RPA1-203ENST00000571058 FKBP5Q13451 457 aaPredicted RBP22.06■■□□□ 1.12
RPA1-203ENST00000571058 G2E3Q7L622 706 aa22.06■■□□□ 1.12
RPA1-203ENST00000571058 TAF1DQ9H5J8 278 aaPredicted RBP22.06■■□□□ 1.12
RPA1-203ENST00000571058 KIAA2012Q0VF49 1180 aa22.05■■□□□ 1.12
RPA1-203ENST00000571058 AOC3Q16853 763 aa22.05■■□□□ 1.12
RPA1-203ENST00000571058 CELF1Q92879 486 aaKnown RBP22.05■■□□□ 1.12
RPA1-203ENST00000571058 SPINK5Q9NQ38 1064 aaPredicted RBP22.05■■□□□ 1.12
RPA1-203ENST00000571058 COL4A5P29400 1685 aa22.04■■□□□ 1.12
RPA1-203ENST00000571058 NEURL1BA8MQ27 555 aa22.04■■□□□ 1.12
RPA1-203ENST00000571058 CCER2I3L3R5 266 aa22.04■■□□□ 1.12
RPA1-203ENST00000571058 CHADLQ6NUI6 762 aa22.04■■□□□ 1.12
RPA1-203ENST00000571058 PNMA8AQ86V59 439 aaPredicted RBP22.04■■□□□ 1.12
RPA1-203ENST00000571058 LDHDQ86WU2 507 aa22.04■■□□□ 1.12
RPA1-203ENST00000571058 ZNRF3Q9ULT6 936 aa22.04■■□□□ 1.12
RPA1-203ENST00000571058 SLC51AQ86UW1 340 aa22.03■■□□□ 1.12
RPA1-203ENST00000571058 DNAAF4Q8WXU2 420 aa22.03■■□□□ 1.12
RPA1-203ENST00000571058 MYH3P11055 1940 aa22.02■■□□□ 1.12
RPA1-203ENST00000571058 LMOD1P29536 600 aaPredicted RBP22.02■■□□□ 1.12
RPA1-203ENST00000571058 EPHX2P34913 555 aa22.02■■□□□ 1.12
RPA1-203ENST00000571058 CWF19L2Q2TBE0 894 aaKnown RBP22.02■■□□□ 1.12
RPA1-203ENST00000571058 LINS1Q8NG48 757 aa22.02■■□□□ 1.12
RPA1-203ENST00000571058 NSFL1CQ9UNZ2 370 aaKnown RBP22.02■■□□□ 1.12
RPA1-203ENST00000571058 CTSWP56202 376 aa22.01■■□□□ 1.11
RPA1-203ENST00000571058 GJA3Q9Y6H8 435 aa22.01■■□□□ 1.11
RPA1-203ENST00000571058 E9PSI1 815 aa22■■□□□ 1.11
RPA1-203ENST00000571058 H7C1W4 665 aa22■■□□□ 1.11
RPA1-203ENST00000571058 GCKRQ14397 625 aa22■■□□□ 1.11
RPA1-203ENST00000571058 CDC5LQ99459 802 aaKnown RBP22■■□□□ 1.11
RPA1-203ENST00000571058 EYA3Q99504 573 aa22■■□□□ 1.11
RPA1-203ENST00000571058 RTL9Q8NET4 1388 aa21.99■■□□□ 1.11
RPA1-203ENST00000571058 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
RPA1-203ENST00000571058 TNIP1Q15025 636 aa21.99■■□□□ 1.11
RPA1-203ENST00000571058 WASHC4Q2M389 1173 aa21.99■■□□□ 1.11
RPA1-203ENST00000571058 ANKRD18AQ8IVF6 992 aa21.99■■□□□ 1.11
RPA1-203ENST00000571058 SEC31BQ9NQW1 1179 aa21.99■■□□□ 1.11
RPA1-203ENST00000571058 PODXL2Q9NZ53 605 aa21.99■■□□□ 1.11
RPA1-203ENST00000571058 UBE3BQ7Z3V4 1068 aa21.98■■□□□ 1.11
RPA1-203ENST00000571058 DNAJC5GQ8N7S2 189 aa21.98■■□□□ 1.11
RPA1-203ENST00000571058 TTLL11Q8NHH1 800 aa21.98■■□□□ 1.11
RPA1-203ENST00000571058 JARID2Q92833 1246 aaPredicted RBP21.98■■□□□ 1.11
RPA1-203ENST00000571058 PLA2G12BQ9BX93 195 aa21.98■■□□□ 1.11
RPA1-203ENST00000571058 LTBP1Q14766 1721 aa21.97■■□□□ 1.11
RPA1-203ENST00000571058 C6orf229H3BNL8 230 aa21.97■■□□□ 1.11
RPA1-203ENST00000571058 GPSM2P81274 684 aa21.97■■□□□ 1.11
RPA1-203ENST00000571058 CXCL9Q07325 125 aa21.97■■□□□ 1.11
RPA1-203ENST00000571058 EAPPQ56P03 285 aaPredicted RBP21.97■■□□□ 1.11
RPA1-203ENST00000571058 CIAPIN1Q6FI81 312 aa21.97■■□□□ 1.11
RPA1-203ENST00000571058 POTEIP0CG38 1075 aa21.96■■□□□ 1.11
RPA1-203ENST00000571058 POTEJP0CG39 1038 aa21.96■■□□□ 1.11
RPA1-203ENST00000571058 SCNN1DP51172 638 aa21.96■■□□□ 1.11
RPA1-203ENST00000571058 ANKIB1Q9P2G1 1089 aa21.96■■□□□ 1.11
RPA1-203ENST00000571058 POLLQ9UGP5 575 aa21.96■■□□□ 1.11
RPA1-203ENST00000571058 COL4A1P02462 1669 aa21.95■■□□□ 1.1
RPA1-203ENST00000571058 ADAMTSL1Q8N6G6 1762 aa21.95■■□□□ 1.1
RPA1-203ENST00000571058 TBC1D16Q8TBP0 767 aa21.95■■□□□ 1.1
RPA1-203ENST00000571058 USP50Q70EL3 339 aaPredicted RBP21.94■■□□□ 1.1
RPA1-203ENST00000571058 KLRG1Q96E93 195 aa21.94■■□□□ 1.1
RPA1-203ENST00000571058 CCDC85AQ96PX6 553 aaPredicted RBP21.94■■□□□ 1.1
RPA1-203ENST00000571058 ZC3H12CQ9C0D7 883 aaKnown RBP21.94■■□□□ 1.1
RPA1-203ENST00000571058 BSDC1Q9NW68 430 aaPredicted RBP21.94■■□□□ 1.1
RPA1-203ENST00000571058 GPRC5DQ9NZD1 345 aa21.94■■□□□ 1.1
RPA1-203ENST00000571058 GGA1Q9UJY5 639 aa21.94■■□□□ 1.1
RPA1-203ENST00000571058 CLEC11AQ9Y240 323 aa21.94■■□□□ 1.1
RPA1-203ENST00000571058 XDHP47989 1333 aa21.93■■□□□ 1.1
RPA1-203ENST00000571058 BEND3Q5T5X7 828 aa21.93■■□□□ 1.1
RPA1-203ENST00000571058 CASP7P55210 303 aa21.92■■□□□ 1.1
RPA1-203ENST00000571058 SLFN5Q08AF3 891 aa21.92■■□□□ 1.1
RPA1-203ENST00000571058 GREM2Q9H772 168 aa21.92■■□□□ 1.1
RPA1-203ENST00000571058 CREBZFQ9NS37 354 aa21.92■■□□□ 1.1
RPA1-203ENST00000571058 ADARB2Q9NS39 739 aaKnown RBP21.92■■□□□ 1.1
RPA1-203ENST00000571058 PASKQ96RG2 1323 aa21.91■■□□□ 1.1
RPA1-203ENST00000571058 F6X3S4 739 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms