RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 GRAPLQ8TC17 118 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-207ENST00000570883 ZNF277Q9NRM2 450 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-207ENST00000570883 ATP6V0A2Q9Y487 856 aa17.12■□□□□ 0.33
RPAIN-207ENST00000570883 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
RPAIN-207ENST00000570883 GCKRQ14397 625 aa17.11■□□□□ 0.33
RPAIN-207ENST00000570883 CC2D2BQ6DHV5 1058 aa17.11■□□□□ 0.33
RPAIN-207ENST00000570883 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
RPAIN-207ENST00000570883 SSH1Q8WYL5 1049 aa17.11■□□□□ 0.33
RPAIN-207ENST00000570883 PSMD1Q99460 953 aa17.11■□□□□ 0.33
RPAIN-207ENST00000570883 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
RPAIN-207ENST00000570883 KIF3CO14782 793 aa17.1■□□□□ 0.33
RPAIN-207ENST00000570883 BBOX1O75936 387 aa17.1■□□□□ 0.33
RPAIN-207ENST00000570883 CASP7P55210 303 aa17.1■□□□□ 0.33
RPAIN-207ENST00000570883 BEND3Q5T5X7 828 aa17.1■□□□□ 0.33
RPAIN-207ENST00000570883 CELF1Q92879 486 aaKnown RBP17.1■□□□□ 0.33
RPAIN-207ENST00000570883 H7C1W4 665 aa17.09■□□□□ 0.33
RPAIN-207ENST00000570883 PDE8AO60658 829 aa17.09■□□□□ 0.33
RPAIN-207ENST00000570883 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPAIN-207ENST00000570883 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
RPAIN-207ENST00000570883 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
RPAIN-207ENST00000570883 A0A1B0GUL6 1792 aa17.08■□□□□ 0.33
RPAIN-207ENST00000570883 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
RPAIN-207ENST00000570883 IARSP41252 1262 aaKnown RBP17.08■□□□□ 0.32
RPAIN-207ENST00000570883 SP8Q8IXZ3 490 aa17.08■□□□□ 0.32
RPAIN-207ENST00000570883 SEC31BQ9NQW1 1179 aa17.08■□□□□ 0.32
RPAIN-207ENST00000570883 GLTPD2A6NH11 291 aa17.07■□□□□ 0.32
RPAIN-207ENST00000570883 HSP90B1P14625 803 aaKnown RBP17.07■□□□□ 0.32
RPAIN-207ENST00000570883 CTSWP56202 376 aa17.07■□□□□ 0.32
RPAIN-207ENST00000570883 GRIPAP1Q4V328 841 aa17.07■□□□□ 0.32
RPAIN-207ENST00000570883 CCDC85AQ96PX6 553 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-207ENST00000570883 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
RPAIN-207ENST00000570883 SCN4AP35499 1836 aa17.06■□□□□ 0.32
RPAIN-207ENST00000570883 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
RPAIN-207ENST00000570883 CCDC152Q4G0S7 254 aa17.06■□□□□ 0.32
RPAIN-207ENST00000570883 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
RPAIN-207ENST00000570883 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
RPAIN-207ENST00000570883 PTPRCP08575 1304 aa17.05■□□□□ 0.32
RPAIN-207ENST00000570883 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-207ENST00000570883 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
RPAIN-207ENST00000570883 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
RPAIN-207ENST00000570883 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
RPAIN-207ENST00000570883 RTFDC1Q9BY42 306 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-207ENST00000570883 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
RPAIN-207ENST00000570883 SLC4A10Q6U841 1118 aa17.04■□□□□ 0.32
RPAIN-207ENST00000570883 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-207ENST00000570883 GREM2Q9H772 168 aa17.04■□□□□ 0.32
RPAIN-207ENST00000570883 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
RPAIN-207ENST00000570883 SMC4Q9NTJ3 1288 aa17.04■□□□□ 0.32
RPAIN-207ENST00000570883 CEP350Q5VT06 3117 aa17.04■□□□□ 0.32
RPAIN-207ENST00000570883 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
RPAIN-207ENST00000570883 FZD9O00144 591 aa17.03■□□□□ 0.32
RPAIN-207ENST00000570883 ALDH1L1O75891 902 aa17.03■□□□□ 0.32
RPAIN-207ENST00000570883 MPNDQ8N594 471 aa17.03■□□□□ 0.32
RPAIN-207ENST00000570883 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-207ENST00000570883 POTECB2RU33 542 aa17.02■□□□□ 0.32
RPAIN-207ENST00000570883 GRM8O00222 908 aa17.02■□□□□ 0.32
RPAIN-207ENST00000570883 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-207ENST00000570883 GPSM2P81274 684 aa17.02■□□□□ 0.32
RPAIN-207ENST00000570883 AOC3Q16853 763 aa17.02■□□□□ 0.32
RPAIN-207ENST00000570883 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
RPAIN-207ENST00000570883 SRCIN1Q9C0H9 1055 aa17.02■□□□□ 0.32
RPAIN-207ENST00000570883 PSME4Q14997 1843 aa17.02■□□□□ 0.31
RPAIN-207ENST00000570883 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
RPAIN-207ENST00000570883 PPIP5K2O43314 1243 aa17.01■□□□□ 0.31
RPAIN-207ENST00000570883 RARSP54136 660 aaKnown RBP17.01■□□□□ 0.31
RPAIN-207ENST00000570883 FOXO4P98177 505 aa17.01■□□□□ 0.31
RPAIN-207ENST00000570883 FAM161AQ3B820 660 aa17.01■□□□□ 0.31
RPAIN-207ENST00000570883 DPY19L2Q6NUT2 758 aa17.01■□□□□ 0.31
RPAIN-207ENST00000570883 CSF1RP07333 972 aa17■□□□□ 0.31
RPAIN-207ENST00000570883 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
RPAIN-207ENST00000570883 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
RPAIN-207ENST00000570883 ANKRD18AQ8IVF6 992 aa17■□□□□ 0.31
RPAIN-207ENST00000570883 SUPT20HQ8NEM7 779 aa17■□□□□ 0.31
RPAIN-207ENST00000570883 JDP2Q8WYK2 163 aa17■□□□□ 0.31
RPAIN-207ENST00000570883 POLLQ9UGP5 575 aa17■□□□□ 0.31
RPAIN-207ENST00000570883 NSFL1CQ9UNZ2 370 aaKnown RBP17■□□□□ 0.31
RPAIN-207ENST00000570883 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-207ENST00000570883 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-207ENST00000570883 CDC5LQ99459 802 aaKnown RBP16.99■□□□□ 0.31
RPAIN-207ENST00000570883 VPS33BQ9H267 617 aa16.99■□□□□ 0.31
RPAIN-207ENST00000570883 UTYO14607 1347 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 ZNF646O15015 1829 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-207ENST00000570883 ADAMTSL1Q8N6G6 1762 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 TOMM70O94826 608 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-207ENST00000570883 ITGA6P23229 1130 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 TBC1D16Q8TBP0 767 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 GPR101Q96P66 508 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-207ENST00000570883 PODXL2Q9NZ53 605 aa16.98■□□□□ 0.31
RPAIN-207ENST00000570883 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-207ENST00000570883 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
RPAIN-207ENST00000570883 NBPF7P0C2Y1 421 aaPredicted RBP16.97■□□□□ 0.31
RPAIN-207ENST00000570883 SUCLG2Q96I99 432 aa16.97■□□□□ 0.31
RPAIN-207ENST00000570883 GPC2Q8N158 579 aa16.96■□□□□ 0.31
RPAIN-207ENST00000570883 BSDC1Q9NW68 430 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-207ENST00000570883 YDJCA8MPS7 323 aa16.95■□□□□ 0.3
RPAIN-207ENST00000570883 C6orf229H3BNL8 230 aa16.95■□□□□ 0.3
RPAIN-207ENST00000570883 UFL1O94874 794 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms