RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 A1BGP04217 495 aa8.65□□□□□ -1.02
SMG6-204ENST00000570606 U2AF1L5P0DN76 240 aaPredicted RBP8.65□□□□□ -1.02
SMG6-204ENST00000570606 HOXB3P14651 431 aaPredicted RBP8.65□□□□□ -1.02
SMG6-204ENST00000570606 HTRA3P83110 453 aa8.65□□□□□ -1.02
SMG6-204ENST00000570606 U2AF1Q01081 240 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG6-204ENST00000570606 TSR1Q2NL82 804 aaKnown RBP8.65□□□□□ -1.02
SMG6-204ENST00000570606 DZIP3Q86Y13 1208 aaKnown RBP8.65□□□□□ -1.02
SMG6-204ENST00000570606 FBXW7Q969H0 707 aa8.65□□□□□ -1.02
SMG6-204ENST00000570606 PHACTR3Q96KR7 559 aa8.65□□□□□ -1.02
SMG6-204ENST00000570606 SETDB2Q96T68 719 aa8.65□□□□□ -1.02
SMG6-204ENST00000570606 BRIP1Q9BX63 1249 aa8.65□□□□□ -1.02
SMG6-204ENST00000570606 GLTPD2A6NH11 291 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 KCNQ3O43525 872 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 C21orf2O43822 256 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 CAMTA2O94983 1202 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 PIP4K2AP48426 406 aaPredicted RBP8.64□□□□□ -1.03
SMG6-204ENST00000570606 PRELPP51888 382 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 MCM10Q7L590 875 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 ZNF652Q9Y2D9 606 aa8.64□□□□□ -1.03
SMG6-204ENST00000570606 KDM3BQ7LBC6 1761 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 VEGFAP15692 232 aaPredicted RBP8.63□□□□□ -1.03
SMG6-204ENST00000570606 PPP2R1AP30153 589 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 FOSBP53539 338 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 NBPF5PQ86XG9 351 aaPredicted RBP8.63□□□□□ -1.03
SMG6-204ENST00000570606 DNAJC5GQ8N7S2 189 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 FAM117AQ9C073 453 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 TAOK3Q9H2K8 898 aa8.63□□□□□ -1.03
SMG6-204ENST00000570606 PCNTO95613 3336 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 PRAMEF22A3QJZ6 481 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 NEFMP07197 916 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 SNRPA1P09661 255 aaKnown RBP8.62□□□□□ -1.03
SMG6-204ENST00000570606 DOK7Q18PE1 504 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 SOGA3Q5TF21 947 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 STYK1Q6J9G0 422 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 PRPF40BQ6NWY9 871 aaKnown RBP8.62□□□□□ -1.03
SMG6-204ENST00000570606 MASTLQ96GX5 879 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 USP16Q9Y5T5 823 aa8.62□□□□□ -1.03
SMG6-204ENST00000570606 NUP98P52948 1817 aa8.61□□□□□ -1.03
SMG6-204ENST00000570606 LTBP3Q9NS15 1303 aa8.61□□□□□ -1.03
SMG6-204ENST00000570606 NUDT7P0C024 238 aa8.61□□□□□ -1.03
SMG6-204ENST00000570606 DCTN1Q14203 1278 aa8.61□□□□□ -1.03
SMG6-204ENST00000570606 CLEC4GQ6UXB4 293 aa8.61□□□□□ -1.03
SMG6-204ENST00000570606 KHSRPQ92945 711 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMG6-204ENST00000570606 ZSWIM6Q9HCJ5 1215 aa8.61□□□□□ -1.03
SMG6-204ENST00000570606 SCN4AP35499 1836 aa8.61□□□□□ -1.03
SMG6-204ENST00000570606 FAM177BA6PVY3 158 aa8.6□□□□□ -1.03
SMG6-204ENST00000570606 SRGNP10124 158 aa8.6□□□□□ -1.03
SMG6-204ENST00000570606 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
SMG6-204ENST00000570606 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
SMG6-204ENST00000570606 JMYQ8N9B5 988 aa8.6□□□□□ -1.03
SMG6-204ENST00000570606 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMG6-204ENST00000570606 HTATSF1O43719 755 aaKnown RBP8.59□□□□□ -1.03
SMG6-204ENST00000570606 NPR1P16066 1061 aa8.59□□□□□ -1.03
SMG6-204ENST00000570606 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
SMG6-204ENST00000570606 TTLL12Q14166 644 aaPredicted RBP8.59□□□□□ -1.03
SMG6-204ENST00000570606 ARSIQ5FYB1 569 aa8.59□□□□□ -1.03
SMG6-204ENST00000570606 MAPK8IP3Q9UPT6 1336 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 NBPF26B4DH59 902 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 DDNO94850 711 aaPredicted RBP8.58□□□□□ -1.04
SMG6-204ENST00000570606 TAF7Q15545 349 aaPredicted RBP8.58□□□□□ -1.04
SMG6-204ENST00000570606 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 NBPF10Q6P3W6 841 aaKnown RBP8.58□□□□□ -1.04
SMG6-204ENST00000570606 TPTE2Q6XPS3 522 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 KIF6Q6ZMV9 814 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 NGEFQ8N5V2 710 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 DDRGK1Q96HY6 314 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
SMG6-204ENST00000570606 ABCC12Q96J65 1359 aa8.58□□□□□ -1.04
SMG6-204ENST00000570606 IQCA1LA6NCM1 817 aa8.57□□□□□ -1.04
SMG6-204ENST00000570606 POTECB2RU33 542 aa8.57□□□□□ -1.04
SMG6-204ENST00000570606 FKBP4Q02790 459 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMG6-204ENST00000570606 GIGYF2Q6Y7W6 1299 aaKnown RBP8.57□□□□□ -1.04
SMG6-204ENST00000570606 PNISRQ8TF01 805 aaKnown RBP8.57□□□□□ -1.04
SMG6-204ENST00000570606 TMUB1Q9BVT8 246 aa8.57□□□□□ -1.04
SMG6-204ENST00000570606 NYXQ9GZU5 481 aa8.57□□□□□ -1.04
SMG6-204ENST00000570606 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
SMG6-204ENST00000570606 ZNF277Q9NRM2 450 aaPredicted RBP8.57□□□□□ -1.04
SMG6-204ENST00000570606 MIS18AQ9NYP9 233 aa8.57□□□□□ -1.04
SMG6-204ENST00000570606 ANKRD36CQ5JPF3 1778 aa8.56□□□□□ -1.04
SMG6-204ENST00000570606 RIMBP2O15034 1052 aa8.56□□□□□ -1.04
SMG6-204ENST00000570606 HSPA1AP0DMV8 641 aaKnown RBP8.56□□□□□ -1.04
SMG6-204ENST00000570606 HSPA1BP0DMV9 641 aaKnown RBP8.56□□□□□ -1.04
SMG6-204ENST00000570606 HLFQ16534 295 aa8.56□□□□□ -1.04
SMG6-204ENST00000570606 MAMSTRQ6ZN01 415 aa8.56□□□□□ -1.04
SMG6-204ENST00000570606 ADAM33Q9BZ11 813 aa8.56□□□□□ -1.04
SMG6-204ENST00000570606 MAP3K15Q6ZN16 1313 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 ZNF541Q9H0D2 1346 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 MS4A1P11836 297 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 MYL6BP14649 208 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 GPTP24298 496 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 ALDH1B1P30837 517 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 EAPPQ56P03 285 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms