RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 SP8Q8IXZ3 490 aa16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 SSH1Q8WYL5 1049 aa16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 LRRC37AA6NMS7 1700 aa16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 MYH3P11055 1940 aa16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 F6X3S4 739 aa16.54■□□□□ 0.24
CHRNB1-203ENST00000570557 PDE8AO60658 829 aa16.54■□□□□ 0.24
CHRNB1-203ENST00000570557 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
CHRNB1-203ENST00000570557 ALDH1L2Q3SY69 923 aa16.54■□□□□ 0.24
CHRNB1-203ENST00000570557 JARID2Q92833 1246 aaPredicted RBP16.54■□□□□ 0.24
CHRNB1-203ENST00000570557 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
CHRNB1-203ENST00000570557 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
CHRNB1-203ENST00000570557 PLA2G12BQ9BX93 195 aa16.53■□□□□ 0.24
CHRNB1-203ENST00000570557 RTFDC1Q9BY42 306 aaPredicted RBP16.53■□□□□ 0.24
CHRNB1-203ENST00000570557 KIF3CO14782 793 aa16.52■□□□□ 0.24
CHRNB1-203ENST00000570557 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.24
CHRNB1-203ENST00000570557 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
CHRNB1-203ENST00000570557 GLTPD2A6NH11 291 aa16.51■□□□□ 0.23
CHRNB1-203ENST00000570557 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
CHRNB1-203ENST00000570557 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
CHRNB1-203ENST00000570557 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
CHRNB1-203ENST00000570557 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
CHRNB1-203ENST00000570557 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
CHRNB1-203ENST00000570557 PTPRCP08575 1304 aa16.5■□□□□ 0.23
CHRNB1-203ENST00000570557 COL4A5P29400 1685 aa16.5■□□□□ 0.23
CHRNB1-203ENST00000570557 IARSP41252 1262 aaKnown RBP16.5■□□□□ 0.23
CHRNB1-203ENST00000570557 CTSWP56202 376 aa16.5■□□□□ 0.23
CHRNB1-203ENST00000570557 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
CHRNB1-203ENST00000570557 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
CHRNB1-203ENST00000570557 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 CCDC152Q4G0S7 254 aa16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 WDR90Q96KV7 1748 aa16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 VPS33BQ9H267 617 aa16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 NMRK2Q9NPI5 230 aa16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 DUOX1Q9NRD9 1551 aa16.49■□□□□ 0.23
CHRNB1-203ENST00000570557 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
CHRNB1-203ENST00000570557 FZD9O00144 591 aa16.48■□□□□ 0.23
CHRNB1-203ENST00000570557 CSF1RP07333 972 aa16.48■□□□□ 0.23
CHRNB1-203ENST00000570557 POTECB2RU33 542 aa16.47■□□□□ 0.23
CHRNB1-203ENST00000570557 RARSP54136 660 aaKnown RBP16.47■□□□□ 0.23
CHRNB1-203ENST00000570557 MPNDQ8N594 471 aa16.47■□□□□ 0.23
CHRNB1-203ENST00000570557 BCL2L13Q9BXK5 485 aa16.47■□□□□ 0.23
CHRNB1-203ENST00000570557 UTYO14607 1347 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 GRM8O00222 908 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 C1QTNF8P60827 252 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 FOXO4P98177 505 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 SRCIN1Q9C0H9 1055 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 GREM2Q9H772 168 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
CHRNB1-203ENST00000570557 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
CHRNB1-203ENST00000570557 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
CHRNB1-203ENST00000570557 SUPT20HQ8NEM7 779 aa16.45■□□□□ 0.22
CHRNB1-203ENST00000570557 CCDC85AQ96PX6 553 aaPredicted RBP16.45■□□□□ 0.22
CHRNB1-203ENST00000570557 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
CHRNB1-203ENST00000570557 RRAGCQ9HB90 399 aa16.45■□□□□ 0.22
CHRNB1-203ENST00000570557 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
CHRNB1-203ENST00000570557 GPSM2P81274 684 aa16.44■□□□□ 0.22
CHRNB1-203ENST00000570557 SLC4A10Q6U841 1118 aa16.44■□□□□ 0.22
CHRNB1-203ENST00000570557 L3MBTL3Q96JM7 780 aaPredicted RBP16.44■□□□□ 0.22
CHRNB1-203ENST00000570557 ZNF541Q9H0D2 1346 aa16.44■□□□□ 0.22
CHRNB1-203ENST00000570557 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
CHRNB1-203ENST00000570557 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
CHRNB1-203ENST00000570557 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
CHRNB1-203ENST00000570557 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
CHRNB1-203ENST00000570557 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
CHRNB1-203ENST00000570557 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
CHRNB1-203ENST00000570557 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 TOMM70O94826 608 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 VEGFAP15692 232 aaPredicted RBP16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 AOC3Q16853 763 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 LARGE2Q8N3Y3 721 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 CDC5LQ99459 802 aaKnown RBP16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 NOB1Q9ULX3 412 aaKnown RBP16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 SCN4AP35499 1836 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
CHRNB1-203ENST00000570557 NBPF7P0C2Y1 421 aaPredicted RBP16.41■□□□□ 0.22
CHRNB1-203ENST00000570557 ITGA6P23229 1130 aa16.41■□□□□ 0.22
CHRNB1-203ENST00000570557 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
CHRNB1-203ENST00000570557 TBC1D16Q8TBP0 767 aa16.41■□□□□ 0.22
CHRNB1-203ENST00000570557 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
CHRNB1-203ENST00000570557 USP44Q9H0E7 712 aa16.41■□□□□ 0.22
CHRNB1-203ENST00000570557 C9orf78Q9NZ63 289 aaPredicted RBP16.41■□□□□ 0.22
CHRNB1-203ENST00000570557 RBM46Q8TBY0 533 aaKnown RBP16.4■□□□□ 0.22
CHRNB1-203ENST00000570557 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
CHRNB1-203ENST00000570557 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
CHRNB1-203ENST00000570557 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
CHRNB1-203ENST00000570557 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
CHRNB1-203ENST00000570557 GPC2Q8N158 579 aa16.39■□□□□ 0.21
CHRNB1-203ENST00000570557 API5Q9BZZ5 524 aaKnown RBP16.39■□□□□ 0.21
CHRNB1-203ENST00000570557 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
CHRNB1-203ENST00000570557 EIF6P56537 245 aaKnown RBP16.38■□□□□ 0.21
CHRNB1-203ENST00000570557 RABL6Q3YEC7 729 aaPredicted RBP16.38■□□□□ 0.21
CHRNB1-203ENST00000570557 XDHP47989 1333 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms