RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PPP1R12BO60237 982 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-221ENST00000569924 INHAP05111 366 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 USP5P45974 858 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 SCTRP47872 440 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 GDF10P55107 478 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 EGFLAMQ63HQ2 1017 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 ZNF654Q8IZM8 581 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 ZNF687Q8N1G0 1237 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 ABTB2Q8N961 1025 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 FBF1Q8TES7 1133 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 FRMD6Q96NE9 622 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 SLC4A9Q96Q91 983 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 KCTD15Q96SI1 283 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-221ENST00000569924 C2orf49Q9BVC5 232 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-221ENST00000569924 CYLDQ9NQC7 956 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 DDX41Q9UJV9 622 aaKnown RBP4.52□□□□□ -1.69
CNOT1-221ENST00000569924 INPP5FQ9Y2H2 1132 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 TBX22Q9Y458 520 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 AK5Q9Y6K8 562 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 ERBINQ96RT1 1412 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 KDM5AP29375 1690 aaKnown RBP4.51□□□□□ -1.69
CNOT1-221ENST00000569924 CFAP65Q6ZU64 1925 aaKnown RBP4.51□□□□□ -1.69
CNOT1-221ENST00000569924 GOLGA8CPA6NN73 597 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 ERVH48-1M5A8F1 160 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 ZBTB39O15060 712 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 ZBTB24O43167 697 aaPredicted RBP4.51□□□□□ -1.69
CNOT1-221ENST00000569924 ADH1BP00325 375 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 BCAMP50895 628 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 RAB15P59190 212 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 ERVK-9P63128 1117 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 LINC01559Q495D7 138 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 CC2D2BQ6DHV5 1058 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 VPS37DQ86XT2 251 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 GJD3Q8N144 294 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 PMFBP1Q8TBY8 1022 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 TRIM52Q96A61 297 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 MYO19Q96H55 970 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 CRELD1Q96HD1 420 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 PIF1Q9H611 641 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 ZSWIM4Q9H7M6 989 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.51□□□□□ -1.69
CNOT1-221ENST00000569924 FAM135BQ49AJ0 1406 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 KIF15Q9NS87 1388 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 TMEM2Q9UHN6 1383 aa4.51□□□□□ -1.69
CNOT1-221ENST00000569924 XIRP1Q702N8 1843 aaKnown RBP4.51□□□□□ -1.69
CNOT1-221ENST00000569924 ABCC5O15440 1437 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 ZPR1O75312 459 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 CTSHP09668 335 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 BRD2P25440 801 aaKnown RBP4.5□□□□□ -1.69
CNOT1-221ENST00000569924 MZF1P28698 734 aaPredicted RBP4.5□□□□□ -1.69
CNOT1-221ENST00000569924 LTKP29376 864 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 COPS2P61201 443 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 RACK1P63244 317 aaKnown RBP4.5□□□□□ -1.69
CNOT1-221ENST00000569924 FOXK2Q01167 660 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 PTPN12Q05209 780 aaKnown RBP4.5□□□□□ -1.69
CNOT1-221ENST00000569924 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
CNOT1-221ENST00000569924 PPP1R18Q6NYC8 613 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 CSRNP1Q96S65 589 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 CFHR5Q9BXR6 569 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 OSBPL3Q9H4L5 887 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 SCHIP1Q9P0W5 487 aaPredicted RBP4.5□□□□□ -1.69
CNOT1-221ENST00000569924 SERTAD1Q9UHV2 236 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 LRFN2Q9ULH4 789 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 POLIQ9UNA4 740 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 EID1Q9Y6B2 187 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 CROCC2H7BZ55 1655 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 LMTK2Q8IWU2 1503 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 KANK1Q14678 1352 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 PIK3C2BO00750 1634 aa4.5□□□□□ -1.69
CNOT1-221ENST00000569924 TET3O43151 1660 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 HRO43593 1189 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 STK10O94804 968 aaKnown RBP4.49□□□□□ -1.69
CNOT1-221ENST00000569924 STAU1O95793 577 aaKnown RBP4.49□□□□□ -1.69
CNOT1-221ENST00000569924 KCNA6P17658 529 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 MTFR1Q15390 333 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 ZNF394Q53GI3 561 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 INTS6LQ5JSJ4 861 aaKnown RBP4.49□□□□□ -1.69
CNOT1-221ENST00000569924 ZNF746Q6NUN9 644 aaPredicted RBP4.49□□□□□ -1.69
CNOT1-221ENST00000569924 ADGRD1Q6QNK2 874 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 USP48Q86UV5 1035 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 ATCAYQ86WG3 371 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 MCF2L2Q86YR7 1114 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 NLGN1Q8N2Q7 840 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 STAC3Q96MF2 364 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 POLR3GLQ9BT43 218 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 SLC6A16Q9GZN6 736 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 OSBPL2Q9H1P3 480 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 QTRT2Q9H974 415 aaKnown RBP4.49□□□□□ -1.69
CNOT1-221ENST00000569924 ETNK1Q9HBU6 452 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 SRA1Q9HD15 236 aaKnown RBP4.49□□□□□ -1.69
CNOT1-221ENST00000569924 MAP4K5Q9Y4K4 846 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 EFCAB6Q5THR3 1501 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 PTPN23Q9H3S7 1636 aa4.49□□□□□ -1.69
CNOT1-221ENST00000569924 NOS1P29475 1434 aa4.48□□□□□ -1.69
CNOT1-221ENST00000569924 DAPK1P53355 1430 aa4.48□□□□□ -1.69
CNOT1-221ENST00000569924 A6NJY4 79 aa4.48□□□□□ -1.69
CNOT1-221ENST00000569924 TLL1O43897 1013 aa4.48□□□□□ -1.69
CNOT1-221ENST00000569924 NEFLP07196 543 aa4.48□□□□□ -1.69
CNOT1-221ENST00000569924 PSMA6P60900 246 aaKnown RBP4.48□□□□□ -1.69
CNOT1-221ENST00000569924 SH3BP2P78314 561 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms