RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 SF3B3Q15393 1217 aaKnown RBP29.07■■■□□ 2.24
RBFOX1-219ENST00000569895 ZNF428Q96B54 188 aa29.07■■■□□ 2.24
RBFOX1-219ENST00000569895 MRS2Q9HD23 443 aa29.07■■■□□ 2.24
RBFOX1-219ENST00000569895 AOC3Q16853 763 aa29.06■■■□□ 2.24
RBFOX1-219ENST00000569895 CREBZFQ9NS37 354 aa29.06■■■□□ 2.24
RBFOX1-219ENST00000569895 NCBP3Q53F19 620 aaKnown RBP29.05■■■□□ 2.24
RBFOX1-219ENST00000569895 IRS4O14654 1257 aaPredicted RBP29.04■■■□□ 2.24
RBFOX1-219ENST00000569895 SLC51AQ86UW1 340 aa29.04■■■□□ 2.24
RBFOX1-219ENST00000569895 WWC1Q8IX03 1113 aa29.04■■■□□ 2.24
RBFOX1-219ENST00000569895 ZNRF3Q9ULT6 936 aa29.04■■■□□ 2.24
RBFOX1-219ENST00000569895 RTL5Q5HYW3 569 aaPredicted RBP29.03■■■□□ 2.24
RBFOX1-219ENST00000569895 ZBTB38Q8NAP3 1195 aaPredicted RBP29.03■■■□□ 2.24
RBFOX1-219ENST00000569895 MYD88Q99836 296 aa29.03■■■□□ 2.24
RBFOX1-219ENST00000569895 CCDC191Q8NCU4 936 aa29.02■■■□□ 2.24
RBFOX1-219ENST00000569895 STK31Q9BXU1 1019 aa29.02■■■□□ 2.24
RBFOX1-219ENST00000569895 IL16Q14005 1332 aa29■■■□□ 2.23
RBFOX1-219ENST00000569895 PASKQ96RG2 1323 aa29■■■□□ 2.23
RBFOX1-219ENST00000569895 KIAA2012Q0VF49 1180 aa29■■■□□ 2.23
RBFOX1-219ENST00000569895 TSPYL6Q8N831 410 aa29■■■□□ 2.23
RBFOX1-219ENST00000569895 TSR2Q969E8 191 aaKnown RBP29■■■□□ 2.23
RBFOX1-219ENST00000569895 METTL22Q9BUU2 404 aaPredicted RBP29■■■□□ 2.23
RBFOX1-219ENST00000569895 COL4A5P29400 1685 aa28.99■■■□□ 2.23
RBFOX1-219ENST00000569895 ITGBL1O95965 494 aaPredicted RBP28.99■■■□□ 2.23
RBFOX1-219ENST00000569895 IFFO2Q5TF58 517 aa28.99■■■□□ 2.23
RBFOX1-219ENST00000569895 CNTROBQ8N137 903 aa28.99■■■□□ 2.23
RBFOX1-219ENST00000569895 CWC25Q9NXE8 425 aaPredicted RBP28.99■■■□□ 2.23
RBFOX1-219ENST00000569895 SCNN1DP51172 638 aa28.98■■■□□ 2.23
RBFOX1-219ENST00000569895 CELF1Q92879 486 aaKnown RBP28.98■■■□□ 2.23
RBFOX1-219ENST00000569895 PCCAP05165 728 aaPredicted RBP28.97■■■□□ 2.23
RBFOX1-219ENST00000569895 RPS8P62241 208 aaKnown RBP28.97■■■□□ 2.23
RBFOX1-219ENST00000569895 CXCL9Q07325 125 aa28.97■■■□□ 2.23
RBFOX1-219ENST00000569895 TNIP1Q15025 636 aa28.97■■■□□ 2.23
RBFOX1-219ENST00000569895 USP50Q70EL3 339 aaPredicted RBP28.97■■■□□ 2.23
RBFOX1-219ENST00000569895 NSFL1CQ9UNZ2 370 aaKnown RBP28.97■■■□□ 2.23
RBFOX1-219ENST00000569895 LAMB2P55268 1798 aa28.97■■■□□ 2.23
RBFOX1-219ENST00000569895 TMEM88BA6NKF7 163 aa28.96■■■□□ 2.23
RBFOX1-219ENST00000569895 EPS15P42566 896 aa28.96■■■□□ 2.23
RBFOX1-219ENST00000569895 TWISTNBQ3B726 338 aaPredicted RBP28.96■■■□□ 2.23
RBFOX1-219ENST00000569895 MAP1SQ66K74 1059 aaPredicted RBP28.96■■■□□ 2.23
RBFOX1-219ENST00000569895 KSR2Q6VAB6 950 aa28.96■■■□□ 2.23
RBFOX1-219ENST00000569895 MAP3K2Q9Y2U5 619 aa28.96■■■□□ 2.23
RBFOX1-219ENST00000569895 CIAPIN1Q6FI81 312 aa28.95■■■□□ 2.22
RBFOX1-219ENST00000569895 PDE8AO60658 829 aa28.94■■■□□ 2.22
RBFOX1-219ENST00000569895 NEXNQ0ZGT2 675 aa28.94■■■□□ 2.22
RBFOX1-219ENST00000569895 WASHC4Q2M389 1173 aa28.94■■■□□ 2.22
RBFOX1-219ENST00000569895 CCDC152Q4G0S7 254 aa28.94■■■□□ 2.22
RBFOX1-219ENST00000569895 GPRC5DQ9NZD1 345 aa28.93■■■□□ 2.22
RBFOX1-219ENST00000569895 MKRN1Q9UHC7 482 aaKnown RBP28.93■■■□□ 2.22
RBFOX1-219ENST00000569895 PI4KAP2A4QPH2 592 aa28.92■■■□□ 2.22
RBFOX1-219ENST00000569895 C6orf229H3BNL8 230 aa28.92■■■□□ 2.22
RBFOX1-219ENST00000569895 WDR63Q8IWG1 891 aa28.92■■■□□ 2.22
RBFOX1-219ENST00000569895 PI4KAP1Q8N8J0 262 aa28.92■■■□□ 2.22
RBFOX1-219ENST00000569895 EYA3Q99504 573 aa28.92■■■□□ 2.22
RBFOX1-219ENST00000569895 BCL2L13Q9BXK5 485 aa28.92■■■□□ 2.22
RBFOX1-219ENST00000569895 ADARB2Q9NS39 739 aaKnown RBP28.92■■■□□ 2.22
RBFOX1-219ENST00000569895 DDX60Q8IY21 1712 aaKnown RBP28.91■■■□□ 2.22
RBFOX1-219ENST00000569895 SLC4A2P04920 1241 aa28.91■■■□□ 2.22
RBFOX1-219ENST00000569895 RAD17O75943 681 aa28.9■■■□□ 2.22
RBFOX1-219ENST00000569895 CDHR2Q9BYE9 1310 aa28.9■■■□□ 2.22
RBFOX1-219ENST00000569895 GMPSP49915 693 aaPredicted RBP28.89■■■□□ 2.22
RBFOX1-219ENST00000569895 GPSM2P81274 684 aa28.89■■■□□ 2.22
RBFOX1-219ENST00000569895 SALL2Q9Y467 1007 aaPredicted RBP28.89■■■□□ 2.22
RBFOX1-219ENST00000569895 SEC31BQ9NQW1 1179 aa28.88■■■□□ 2.21
RBFOX1-219ENST00000569895 POLLQ9UGP5 575 aa28.88■■■□□ 2.21
RBFOX1-219ENST00000569895 ADAMTSL1Q8N6G6 1762 aa28.88■■■□□ 2.21
RBFOX1-219ENST00000569895 CNTNAP1P78357 1384 aa28.88■■■□□ 2.21
RBFOX1-219ENST00000569895 JARID2Q92833 1246 aaPredicted RBP28.87■■■□□ 2.21
RBFOX1-219ENST00000569895 RIMBP2O15034 1052 aa28.86■■■□□ 2.21
RBFOX1-219ENST00000569895 HSPA1AP0DMV8 641 aaKnown RBP28.86■■■□□ 2.21
RBFOX1-219ENST00000569895 HSPA1BP0DMV9 641 aaKnown RBP28.86■■■□□ 2.21
RBFOX1-219ENST00000569895 ZC3H12CQ9C0D7 883 aaKnown RBP28.86■■■□□ 2.21
RBFOX1-219ENST00000569895 ANKIB1Q9P2G1 1089 aa28.86■■■□□ 2.21
RBFOX1-219ENST00000569895 YDJCA8MPS7 323 aa28.85■■■□□ 2.21
RBFOX1-219ENST00000569895 IGKV5-2P06315 115 aa28.85■■■□□ 2.21
RBFOX1-219ENST00000569895 ANKRD18AQ8IVF6 992 aa28.85■■■□□ 2.21
RBFOX1-219ENST00000569895 TBC1D16Q8TBP0 767 aa28.85■■■□□ 2.21
RBFOX1-219ENST00000569895 PODXL2Q9NZ53 605 aa28.85■■■□□ 2.21
RBFOX1-219ENST00000569895 FANCIQ9NVI1 1328 aa28.85■■■□□ 2.21
RBFOX1-219ENST00000569895 TAF1P21675 1872 aa28.85■■■□□ 2.21
RBFOX1-219ENST00000569895 H7C1D1 291 aa28.84■■■□□ 2.21
RBFOX1-219ENST00000569895 LRRC37AA6NMS7 1700 aa28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 LTBP1Q14766 1721 aa28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 G3V3G9 751 aa28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 DCAF8Q5TAQ9 597 aa28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 G2E3Q7L622 706 aa28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 CCDC85AQ96PX6 553 aaPredicted RBP28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 CDC5LQ99459 802 aaKnown RBP28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 DBNDD1Q9H9R9 158 aa28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 CNOT7Q9UIV1 285 aaKnown RBP28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 GGA1Q9UJY5 639 aa28.83■■■□□ 2.21
RBFOX1-219ENST00000569895 NEURL1BA8MQ27 555 aa28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 CTSWP56202 376 aa28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 FLIIQ13045 1269 aa28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 DEFB115Q30KQ5 88 aa28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 FAM9BQ8IZU0 186 aa28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 ZC3H15Q8WU90 426 aaKnown RBP28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 DPF2Q92785 391 aa28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 ABT1Q9ULW3 272 aaKnown RBP28.82■■■□□ 2.2
RBFOX1-219ENST00000569895 DUOX1Q9NRD9 1551 aa28.81■■■□□ 2.2
RBFOX1-219ENST00000569895 VAMP4O75379 141 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms