RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 RGPD3A6NKT7 1758 aaPredicted RBP7.29□□□□□ -1.24
CYLD-216ENST00000569891 RGPD4Q7Z3J3 1758 aa7.29□□□□□ -1.24
CYLD-216ENST00000569891 RFX7Q2KHR2 1363 aa7.29□□□□□ -1.24
CYLD-216ENST00000569891 GTF2E1P29083 439 aaPredicted RBP7.29□□□□□ -1.24
CYLD-216ENST00000569891 ISCA1Q9BUE6 129 aa7.29□□□□□ -1.24
CYLD-216ENST00000569891 IL1RAPL2Q9NP60 686 aa7.29□□□□□ -1.24
CYLD-216ENST00000569891 CLEC4GQ6UXB4 293 aa7.29□□□□□ -1.24
CYLD-216ENST00000569891 TRMT112Q9UI30 125 aaKnown RBP7.29□□□□□ -1.24
CYLD-216ENST00000569891 ASAP1Q9ULH1 1129 aa7.29□□□□□ -1.24
CYLD-216ENST00000569891 LAMB1P07942 1786 aa7.29□□□□□ -1.24
CYLD-216ENST00000569891 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 NPHP1O15259 732 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 IGKV5-2P06315 115 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 PSMA5P28066 241 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 SIK1P57059 783 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 FREM2Q5SZK8 3169 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 ATP5J2-PTCD1G3V325 749 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 PDE8AO60658 829 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 CYP19A1P11511 503 aaPredicted RBP7.28□□□□□ -1.24
CYLD-216ENST00000569891 LMBR1LQ6UX01 489 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 ANO2Q9NQ90 1003 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 CHMP5Q9NZZ3 219 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 KCPQ6ZWJ8 1503 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 UTP14AQ9BVJ6 771 aaKnown RBP7.28□□□□□ -1.24
CYLD-216ENST00000569891 CWC22Q9HCG8 908 aaKnown RBP7.28□□□□□ -1.24
CYLD-216ENST00000569891 PALLDQ8WX93 1383 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 BCORQ6W2J9 1755 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 PRAMEF22A3QJZ6 481 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 EYA2O00167 538 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 CCDC152Q4G0S7 254 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 RC3H1Q5TC82 1133 aaKnown RBP7.28□□□□□ -1.24
CYLD-216ENST00000569891 GBP4Q96PP9 640 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 CDC5LQ99459 802 aaKnown RBP7.28□□□□□ -1.24
CYLD-216ENST00000569891 FSD1Q9BTV5 496 aa7.28□□□□□ -1.24
CYLD-216ENST00000569891 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.28□□□□□ -1.24
CYLD-216ENST00000569891 IGHMBP2P38935 993 aaKnown RBP7.27□□□□□ -1.25
CYLD-216ENST00000569891 KRT32Q14532 448 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 FAM98CQ17RN3 349 aaKnown RBP7.27□□□□□ -1.25
CYLD-216ENST00000569891 ESYT1Q9BSJ8 1104 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 KIF13BQ9NQT8 1826 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 SH3TC1Q8TE82 1336 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 ZPR1O75312 459 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 ZFYP08048 801 aaPredicted RBP7.27□□□□□ -1.25
CYLD-216ENST00000569891 SKAP1Q86WV1 359 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 NUTM1Q86Y26 1132 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 CNNM1Q9NRU3 951 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 ABCC12Q96J65 1359 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 NBPF26B4DH59 902 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 TTF1Q15361 905 aaPredicted RBP7.27□□□□□ -1.25
CYLD-216ENST00000569891 NBPF14Q5TI25 921 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 NBPF10Q6P3W6 841 aaKnown RBP7.27□□□□□ -1.25
CYLD-216ENST00000569891 NBPF15Q8N660 670 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 UQCRFS1P1P0C7P4 283 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 ZNF772Q68DY9 489 aaPredicted RBP7.27□□□□□ -1.25
CYLD-216ENST00000569891 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
CYLD-216ENST00000569891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.27□□□□□ -1.25
CYLD-216ENST00000569891 K7ELQ4 463 aaPredicted RBP7.26□□□□□ -1.25
CYLD-216ENST00000569891 NUCB2P80303 420 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 MPHOSPH8Q99549 860 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 SIL1Q9H173 461 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 GNL3LQ9NVN8 582 aaKnown RBP7.26□□□□□ -1.25
CYLD-216ENST00000569891 HMG20BQ9P0W2 317 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 CNTNAP4Q9C0A0 1308 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 TRANK1O15050 2925 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 GSPT1P15170 499 aaKnown RBP7.26□□□□□ -1.25
CYLD-216ENST00000569891 ATP5JP18859 108 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 CHMLP26374 656 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 TTC39AQ5SRH9 613 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 NEUROD6Q96NK8 337 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 ANKRD1Q15327 319 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 TNNI3KQ59H18 835 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 GJD4Q96KN9 370 aaPredicted RBP7.26□□□□□ -1.25
CYLD-216ENST00000569891 TBC1D2BQ9UPU7 963 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 RTCBQ9Y3I0 505 aaKnown RBP7.26□□□□□ -1.25
CYLD-216ENST00000569891 FPGT-TNNI3KV9GXZ4 949 aa7.26□□□□□ -1.25
CYLD-216ENST00000569891 IRS4O14654 1257 aaPredicted RBP7.25□□□□□ -1.25
CYLD-216ENST00000569891 FAM196AQ6ZSG2 479 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 C16orf71Q8IYS4 520 aaPredicted RBP7.25□□□□□ -1.25
CYLD-216ENST00000569891 IGSF3O75054 1194 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 CRKLP46109 303 aaKnown RBP7.25□□□□□ -1.25
CYLD-216ENST00000569891 METTL24Q5JXM2 366 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 LRP10Q7Z4F1 713 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 MARCH10Q8NA82 808 aaPredicted RBP7.25□□□□□ -1.25
CYLD-216ENST00000569891 ACSBG1Q96GR2 724 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 USP26Q9BXU7 913 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 KIF3AQ9Y496 699 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 MROH5Q6ZUA9 1318 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 IFIT1P09914 478 aaKnown RBP7.25□□□□□ -1.25
CYLD-216ENST00000569891 SLC5A1P13866 664 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 KAT6BQ8WYB5 2073 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 DDX11L8A8MPP1 907 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 EIF5P55010 431 aaKnown RBP7.25□□□□□ -1.25
CYLD-216ENST00000569891 TMED8Q6PL24 325 aaPredicted RBP7.25□□□□□ -1.25
CYLD-216ENST00000569891 LDHAL6AQ6ZMR3 332 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 PPP4R3CPQ6ZMV5 832 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 NLRP10Q86W26 655 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 CTNNA3Q9UI47 895 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 ZBTB1Q9Y2K1 713 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 DCHS1Q96JQ0 3298 aa7.25□□□□□ -1.25
CYLD-216ENST00000569891 ARFGEF2Q9Y6D5 1785 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms