RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 SGIP1Q9BQI5 828 aa6.93□□□□□ -1.3
CDH13-213ENST00000569454 BICC1Q9H694 974 aaKnown RBP6.93□□□□□ -1.3
CDH13-213ENST00000569454 COPRSQ9NQ92 184 aa6.93□□□□□ -1.3
CDH13-213ENST00000569454 TRPC6Q9Y210 931 aa6.93□□□□□ -1.3
CDH13-213ENST00000569454 COL22A1Q8NFW1 1626 aaPredicted RBP6.93□□□□□ -1.3
CDH13-213ENST00000569454 MAP3K13O43283 966 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 TRAK2O60296 914 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 CD2BP2O95400 341 aaKnown RBP6.92□□□□□ -1.3
CDH13-213ENST00000569454 RBM6P78332 1123 aaKnown RBP6.92□□□□□ -1.3
CDH13-213ENST00000569454 AIMP1Q12904 312 aaKnown RBP6.92□□□□□ -1.3
CDH13-213ENST00000569454 SLC39A6Q13433 755 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 NUTM1Q86Y26 1132 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 SPRYD3Q8NCJ5 442 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 SUCLG2Q96I99 432 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 SNRKQ9NRH2 765 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 SHANK3Q9BYB0 1731 aa6.92□□□□□ -1.3
CDH13-213ENST00000569454 NUP188Q5SRE5 1749 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 PRAMEF22A3QJZ6 481 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 SNPHO15079 494 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 CYP2E1P05181 493 aaPredicted RBP6.91□□□□□ -1.3
CDH13-213ENST00000569454 MYL6BP14649 208 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 NEK4P51957 841 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 EVA1CP58658 441 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 CUL4AQ13619 759 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 TSHZ3Q63HK5 1081 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 AACSQ86V21 672 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 CCDC191Q8NCU4 936 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 MYD88Q99836 296 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 CDCA7Q9BWT1 371 aaPredicted RBP6.91□□□□□ -1.3
CDH13-213ENST00000569454 TM6SF1Q9BZW5 370 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 GPR108Q9NPR9 543 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 ATG3Q9NT62 314 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 AFDNP55196 1824 aaKnown RBP6.91□□□□□ -1.3
CDH13-213ENST00000569454 DISP2A7MBM2 1401 aa6.91□□□□□ -1.3
CDH13-213ENST00000569454 GOLGA6L3A6NEY3 463 aa6.9□□□□□ -1.3
CDH13-213ENST00000569454 ZKSCAN1P17029 563 aaPredicted RBP6.9□□□□□ -1.3
CDH13-213ENST00000569454 KLHL40Q2TBA0 621 aa6.9□□□□□ -1.3
CDH13-213ENST00000569454 RNF20Q5VTR2 975 aa6.9□□□□□ -1.3
CDH13-213ENST00000569454 KAZALD1Q96I82 304 aa6.9□□□□□ -1.3
CDH13-213ENST00000569454 TMX3Q96JJ7 454 aa6.9□□□□□ -1.3
CDH13-213ENST00000569454 CWC25Q9NXE8 425 aaPredicted RBP6.9□□□□□ -1.3
CDH13-213ENST00000569454 TMOD3Q9NYL9 352 aa6.9□□□□□ -1.3
CDH13-213ENST00000569454 USP16Q9Y5T5 823 aa6.9□□□□□ -1.3
CDH13-213ENST00000569454 SPEF2Q9C093 1822 aa6.9□□□□□ -1.31
CDH13-213ENST00000569454 A0A087WZG4 1122 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 SASH1O94885 1247 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 BAG4O95429 457 aaKnown RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 STARD3NLO95772 234 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 ATP5JP18859 108 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 PSMA5P28066 241 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 IL15P40933 162 aaPredicted RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 MRE11P49959 708 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 TRIM28Q13263 835 aaKnown RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 ANKRD1Q15327 319 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 LRRFIP1Q32MZ4 808 aaKnown RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 HSP90AB3PQ58FF7 597 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 UBE3BQ7Z3V4 1068 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 UNC5CLQ8IV45 518 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 KCNB2Q92953 911 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 ZSCAN31Q96LW9 406 aaPredicted RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 LSG1Q9H089 658 aaKnown RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 HMG20BQ9P0W2 317 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.89□□□□□ -1.31
CDH13-213ENST00000569454 CCDC171Q6TFL3 1326 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 ABCC12Q96J65 1359 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 JCADQ9P266 1359 aa6.89□□□□□ -1.31
CDH13-213ENST00000569454 TJP1Q07157 1748 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 TOGARAM1Q9Y4F4 1720 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 MED23Q9ULK4 1368 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 WDR33Q9C0J8 1336 aaKnown RBP6.88□□□□□ -1.31
CDH13-213ENST00000569454 FSD2A1L4K1 749 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 H7C1W4 665 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 CIAO1O76071 339 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 MBD3O95983 291 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 SSFA2P28290 1259 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 RFX5P48382 616 aaPredicted RBP6.88□□□□□ -1.31
CDH13-213ENST00000569454 CASP7P55210 303 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 PTPN12Q05209 780 aaKnown RBP6.88□□□□□ -1.31
CDH13-213ENST00000569454 KRT32Q14532 448 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 TNNI3KQ59H18 835 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 VPS53Q5VIR6 699 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 KIF6Q6ZMV9 814 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 EAF2Q96CJ1 260 aaPredicted RBP6.88□□□□□ -1.31
CDH13-213ENST00000569454 FSD1Q9BTV5 496 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 PA2G4Q9UQ80 394 aaKnown RBP6.88□□□□□ -1.31
CDH13-213ENST00000569454 ATP6V1DQ9Y5K8 247 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 FPGT-TNNI3KV9GXZ4 949 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 A0A0C4DFX4 3053 aa6.88□□□□□ -1.31
CDH13-213ENST00000569454 WNK3Q9BYP7 1800 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 CICQ96RK0 1608 aaPredicted RBP6.87□□□□□ -1.31
CDH13-213ENST00000569454 PALLDQ8WX93 1383 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 NBPF26B4DH59 902 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 KCNJ4P48050 445 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 NBPF14Q5TI25 921 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
CDH13-213ENST00000569454 CWC27Q6UX04 472 aaKnown RBP6.87□□□□□ -1.31
CDH13-213ENST00000569454 NBPF15Q8N660 670 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDH13-213ENST00000569454 CHMP4CQ96CF2 233 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms