RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 SRCIN1Q9C0H9 1055 aa15.85■□□□□ 0.13
NSMCE1-214ENST00000569236 SBF1O95248 1867 aa15.84■□□□□ 0.13
NSMCE1-214ENST00000569236 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
NSMCE1-214ENST00000569236 BRPF1P55201 1214 aaPredicted RBP15.84■□□□□ 0.13
NSMCE1-214ENST00000569236 RASSF7Q02833 373 aa15.84■□□□□ 0.13
NSMCE1-214ENST00000569236 NOB1Q9ULX3 412 aaKnown RBP15.84■□□□□ 0.13
NSMCE1-214ENST00000569236 MYH3P11055 1940 aa15.84■□□□□ 0.13
NSMCE1-214ENST00000569236 NFKBIEO00221 500 aa15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 BBOX1O75936 387 aa15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 GRAPQ13588 217 aa15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 CCDC152Q4G0S7 254 aa15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 GRAPLQ8TC17 118 aaPredicted RBP15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 TMX4Q9H1E5 349 aaPredicted RBP15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 TAF1P21675 1872 aa15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
NSMCE1-214ENST00000569236 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 LMNB1P20700 586 aa15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 C9orf131Q5VYM1 1079 aa15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 API5Q9BZZ5 524 aaKnown RBP15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 C9orf78Q9NZ63 289 aaPredicted RBP15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 RNF181Q9P0P0 153 aa15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
NSMCE1-214ENST00000569236 LTBP3Q9NS15 1303 aa15.81■□□□□ 0.12
NSMCE1-214ENST00000569236 GRM8O00222 908 aa15.81■□□□□ 0.12
NSMCE1-214ENST00000569236 CASP7P55210 303 aa15.81■□□□□ 0.12
NSMCE1-214ENST00000569236 CTSWP56202 376 aa15.81■□□□□ 0.12
NSMCE1-214ENST00000569236 CCDC85AQ96PX6 553 aaPredicted RBP15.81■□□□□ 0.12
NSMCE1-214ENST00000569236 ATP6V0A2Q9Y487 856 aa15.81■□□□□ 0.12
NSMCE1-214ENST00000569236 BCAR3O75815 825 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 B4GALNT3Q6L9W6 998 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 TMC4Q7Z404 712 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 CELF1Q92879 486 aaKnown RBP15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 PLA2G12BQ9BX93 195 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 FKBP4Q02790 459 aaKnown RBP eCLIP15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 ARHGAP45Q92619 1136 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 TSHZ2Q9NRE2 1034 aa15.8■□□□□ 0.12
NSMCE1-214ENST00000569236 IPO8O15397 1037 aaKnown RBP15.79■□□□□ 0.12
NSMCE1-214ENST00000569236 PRELPP51888 382 aa15.79■□□□□ 0.12
NSMCE1-214ENST00000569236 SP8Q8IXZ3 490 aa15.79■□□□□ 0.12
NSMCE1-214ENST00000569236 FRAT1Q92837 279 aaPredicted RBP15.79■□□□□ 0.12
NSMCE1-214ENST00000569236 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
NSMCE1-214ENST00000569236 SNED1Q8TER0 1413 aa15.78■□□□□ 0.12
NSMCE1-214ENST00000569236 RPS8P62241 208 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-214ENST00000569236 ZNF784Q8NCA9 323 aaPredicted RBP15.78■□□□□ 0.12
NSMCE1-214ENST00000569236 PSMD1Q99460 953 aa15.78■□□□□ 0.12
NSMCE1-214ENST00000569236 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.12
NSMCE1-214ENST00000569236 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
NSMCE1-214ENST00000569236 GREM2Q9H772 168 aa15.77■□□□□ 0.12
NSMCE1-214ENST00000569236 RTL9Q8NET4 1388 aa15.77■□□□□ 0.12
NSMCE1-214ENST00000569236 DICER1Q9UPY3 1922 aaKnown RBP15.77■□□□□ 0.12
NSMCE1-214ENST00000569236 COL4A1P02462 1669 aa15.77■□□□□ 0.11
NSMCE1-214ENST00000569236 LRRC37AA6NMS7 1700 aa15.77■□□□□ 0.11
NSMCE1-214ENST00000569236 TIAM2Q8IVF5 1701 aa15.77■□□□□ 0.11
NSMCE1-214ENST00000569236 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.11
NSMCE1-214ENST00000569236 CDC5LQ99459 802 aaKnown RBP15.77■□□□□ 0.11
NSMCE1-214ENST00000569236 CSF1RP07333 972 aa15.76■□□□□ 0.11
NSMCE1-214ENST00000569236 ANKRD18AQ8IVF6 992 aa15.76■□□□□ 0.11
NSMCE1-214ENST00000569236 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
NSMCE1-214ENST00000569236 ZNF277Q9NRM2 450 aaPredicted RBP15.76■□□□□ 0.11
NSMCE1-214ENST00000569236 UTYO14607 1347 aa15.76■□□□□ 0.11
NSMCE1-214ENST00000569236 ZC3H4Q9UPT8 1303 aaKnown RBP15.76■□□□□ 0.11
NSMCE1-214ENST00000569236 FOXO4P98177 505 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 DPP8Q6V1X1 898 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 MPNDQ8N594 471 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 TRIM27P14373 513 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 ITGA6P23229 1130 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 IARSP41252 1262 aaKnown RBP15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 ZKSCAN2Q63HK3 967 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 USP44Q9H0E7 712 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
NSMCE1-214ENST00000569236 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
NSMCE1-214ENST00000569236 EXOC6Q8TAG9 804 aa15.74■□□□□ 0.11
NSMCE1-214ENST00000569236 ZNF526Q8TF50 670 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-214ENST00000569236 NSFL1CQ9UNZ2 370 aaKnown RBP15.74■□□□□ 0.11
NSMCE1-214ENST00000569236 SPEF2Q9C093 1822 aa15.74■□□□□ 0.11
NSMCE1-214ENST00000569236 IGHMBP2P38935 993 aaKnown RBP15.73■□□□□ 0.11
NSMCE1-214ENST00000569236 EPHA10Q5JZY3 1008 aa15.73■□□□□ 0.11
NSMCE1-214ENST00000569236 LMBR1LQ6UX01 489 aa15.73■□□□□ 0.11
NSMCE1-214ENST00000569236 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-214ENST00000569236 SUCLG2Q96I99 432 aa15.73■□□□□ 0.11
NSMCE1-214ENST00000569236 ANKRD18BA2A2Z9 1011 aa15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 PLIN1O60240 522 aa15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 INTS3Q68E01 1043 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 CLUAP1Q96AJ1 413 aa15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 GPBP1L1Q9HC44 474 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 JDP2Q8WYK2 163 aa15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 KAZALD1Q96I82 304 aa15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-214ENST00000569236 PPIP5K2O43314 1243 aa15.71■□□□□ 0.11
NSMCE1-214ENST00000569236 GPSM2P81274 684 aa15.71■□□□□ 0.11
NSMCE1-214ENST00000569236 CCDC57Q2TAC2 916 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms