RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 KIF13BQ9NQT8 1826 aa11.44□□□□□ -0.58
CHD9-219ENST00000569225 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
CHD9-219ENST00000569225 TTLL11Q8NHH1 800 aa11.44□□□□□ -0.58
CHD9-219ENST00000569225 DDX19BQ9UMR2 479 aa11.44□□□□□ -0.58
CHD9-219ENST00000569225 BCS1LQ9Y276 419 aa11.44□□□□□ -0.58
CHD9-219ENST00000569225 RTL9Q8NET4 1388 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 BBOX1O75936 387 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 CENPBP07199 599 aaPredicted RBP11.43□□□□□ -0.58
CHD9-219ENST00000569225 GRAPQ13588 217 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
CHD9-219ENST00000569225 GPR162Q16538 588 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 SOGA3Q5TF21 947 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
CHD9-219ENST00000569225 TMC4Q7Z404 712 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 GRAPLQ8TC17 118 aaPredicted RBP11.43□□□□□ -0.58
CHD9-219ENST00000569225 SUCLG2Q96I99 432 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 CDC5LQ99459 802 aaKnown RBP11.43□□□□□ -0.58
CHD9-219ENST00000569225 MEIS3Q99687 375 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 CHMP3Q9Y3E7 222 aa11.43□□□□□ -0.58
CHD9-219ENST00000569225 GNAI2P04899 355 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 CSF1RP07333 972 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 FOXO4P98177 505 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 LMBR1LQ6UX01 489 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 TNRC6CQ9HCJ0 1690 aaKnown RBP11.42□□□□□ -0.58
CHD9-219ENST00000569225 PPEF1O14829 653 aaPredicted RBP11.42□□□□□ -0.58
CHD9-219ENST00000569225 GRIN3BO60391 1043 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
CHD9-219ENST00000569225 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
CHD9-219ENST00000569225 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
CHD9-219ENST00000569225 GREM2Q9H772 168 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 COG6Q9Y2V7 657 aa11.42□□□□□ -0.58
CHD9-219ENST00000569225 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
CHD9-219ENST00000569225 ANKRD18BA2A2Z9 1011 aa11.41□□□□□ -0.58
CHD9-219ENST00000569225 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
CHD9-219ENST00000569225 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
CHD9-219ENST00000569225 RABL6Q3YEC7 729 aaPredicted RBP11.41□□□□□ -0.58
CHD9-219ENST00000569225 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
CHD9-219ENST00000569225 ANKRD18AQ8IVF6 992 aa11.41□□□□□ -0.58
CHD9-219ENST00000569225 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
CHD9-219ENST00000569225 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.58
CHD9-219ENST00000569225 ITGA6P23229 1130 aa11.4□□□□□ -0.58
CHD9-219ENST00000569225 IGHMBP2P38935 993 aaKnown RBP11.4□□□□□ -0.58
CHD9-219ENST00000569225 RPS8P62241 208 aaKnown RBP11.4□□□□□ -0.58
CHD9-219ENST00000569225 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.58
CHD9-219ENST00000569225 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
CHD9-219ENST00000569225 EPHA10Q5JZY3 1008 aa11.4□□□□□ -0.58
CHD9-219ENST00000569225 C20orf194Q5TEA3 1177 aa11.4□□□□□ -0.58
CHD9-219ENST00000569225 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
CHD9-219ENST00000569225 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.58
CHD9-219ENST00000569225 LAMB2P55268 1798 aa11.4□□□□□ -0.58
CHD9-219ENST00000569225 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
CHD9-219ENST00000569225 ANKRD44Q8N8A2 993 aa11.4□□□□□ -0.59
CHD9-219ENST00000569225 SEC31BQ9NQW1 1179 aa11.4□□□□□ -0.59
CHD9-219ENST00000569225 COL11A2P13942 1736 aaPredicted RBP11.39□□□□□ -0.59
CHD9-219ENST00000569225 DDX60Q8IY21 1712 aaKnown RBP11.39□□□□□ -0.59
CHD9-219ENST00000569225 KIAA1551Q9HCM1 1747 aa11.39□□□□□ -0.59
CHD9-219ENST00000569225 C21orf2O43822 256 aa11.39□□□□□ -0.59
CHD9-219ENST00000569225 YBX3P16989 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHD9-219ENST00000569225 CCDC93Q567U6 631 aa11.39□□□□□ -0.59
CHD9-219ENST00000569225 CELF1Q92879 486 aaKnown RBP11.39□□□□□ -0.59
CHD9-219ENST00000569225 MPHOSPH8Q99549 860 aa11.39□□□□□ -0.59
CHD9-219ENST00000569225 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
CHD9-219ENST00000569225 ATP6V0A2Q9Y487 856 aa11.39□□□□□ -0.59
CHD9-219ENST00000569225 SP8Q8IXZ3 490 aa11.38□□□□□ -0.59
CHD9-219ENST00000569225 RTKN2Q8IZC4 609 aa11.38□□□□□ -0.59
CHD9-219ENST00000569225 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
CHD9-219ENST00000569225 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
CHD9-219ENST00000569225 DLEC1Q9Y238 1755 aa11.38□□□□□ -0.59
CHD9-219ENST00000569225 MTX1Q13505 466 aa11.37□□□□□ -0.59
CHD9-219ENST00000569225 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
CHD9-219ENST00000569225 ZBTB40Q9NUA8 1239 aa11.37□□□□□ -0.59
CHD9-219ENST00000569225 SRGAP3O43295 1099 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 AAMPQ13685 434 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 DPP8Q6V1X1 898 aaPredicted RBP11.36□□□□□ -0.59
CHD9-219ENST00000569225 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 SUPT20HQ8NEM7 779 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 ANKRD2Q9GZV1 360 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 TAOK3Q9H2K8 898 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
CHD9-219ENST00000569225 MPNDQ8N594 471 aa11.35□□□□□ -0.59
CHD9-219ENST00000569225 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
CHD9-219ENST00000569225 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
CHD9-219ENST00000569225 FBXO3Q9UK99 471 aa11.35□□□□□ -0.59
CHD9-219ENST00000569225 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
CHD9-219ENST00000569225 HMMRO75330 724 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 ATP8B2P98198 1209 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 FKBP4Q02790 459 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHD9-219ENST00000569225 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
CHD9-219ENST00000569225 PSMD1Q99460 953 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
CHD9-219ENST00000569225 XDHP47989 1333 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 CEP85Q6P2H3 762 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 OLFM4Q6UX06 510 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
CHD9-219ENST00000569225 COPRSQ9NQ92 184 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 MINPP1Q9UNW1 487 aa11.34□□□□□ -0.59
CHD9-219ENST00000569225 MROH5Q6ZUA9 1318 aa11.33□□□□□ -0.6
CHD9-219ENST00000569225 EYA2O00167 538 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms