RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 NTSR2O95665 410 aa13.14□□□□□ -0.31
CDH3-210ENST00000569117 NFIXQ14938 502 aa13.14□□□□□ -0.31
CDH3-210ENST00000569117 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
CDH3-210ENST00000569117 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
CDH3-210ENST00000569117 MEIS3Q99687 375 aa13.14□□□□□ -0.31
CDH3-210ENST00000569117 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
CDH3-210ENST00000569117 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
CDH3-210ENST00000569117 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
CDH3-210ENST00000569117 SOCS7O14512 581 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 SEMA3EO15041 775 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
CDH3-210ENST00000569117 PPP1R37O75864 691 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
CDH3-210ENST00000569117 AAMPQ13685 434 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 SETDB2Q96T68 719 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
CDH3-210ENST00000569117 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
CDH3-210ENST00000569117 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 H7C1W4 665 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 GNAI3P08754 354 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 UBTFL1P0CB47 393 aaPredicted RBP13.12□□□□□ -0.31
CDH3-210ENST00000569117 TM4SF1P30408 202 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 CASP7P55210 303 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 DDR1Q08345 913 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
CDH3-210ENST00000569117 EXOC6Q8TAG9 804 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
CDH3-210ENST00000569117 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
CDH3-210ENST00000569117 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
CDH3-210ENST00000569117 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
CDH3-210ENST00000569117 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
CDH3-210ENST00000569117 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
CDH3-210ENST00000569117 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
CDH3-210ENST00000569117 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
CDH3-210ENST00000569117 TRMT112Q9UI30 125 aaKnown RBP13.11□□□□□ -0.31
CDH3-210ENST00000569117 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
CDH3-210ENST00000569117 MSL1Q68DK7 614 aa13.1□□□□□ -0.31
CDH3-210ENST00000569117 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
CDH3-210ENST00000569117 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
CDH3-210ENST00000569117 MTFR1LQ9H019 292 aa13.1□□□□□ -0.31
CDH3-210ENST00000569117 LRP5O75197 1615 aa13.1□□□□□ -0.31
CDH3-210ENST00000569117 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
CDH3-210ENST00000569117 GNAI2P04899 355 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 MMP10P09238 476 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 PLA2G12BQ9BX93 195 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 HDAC5Q9UQL6 1122 aa13.09□□□□□ -0.31
CDH3-210ENST00000569117 C10orf71Q711Q0 1435 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 SERPINB2P05120 415 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 HSP90B1P14625 803 aaKnown RBP13.08□□□□□ -0.32
CDH3-210ENST00000569117 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 SUCLG2Q96I99 432 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
CDH3-210ENST00000569117 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
CDH3-210ENST00000569117 FAM177BA6PVY3 158 aa13.07□□□□□ -0.32
CDH3-210ENST00000569117 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
CDH3-210ENST00000569117 RABL6Q3YEC7 729 aaPredicted RBP13.07□□□□□ -0.32
CDH3-210ENST00000569117 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
CDH3-210ENST00000569117 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
CDH3-210ENST00000569117 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
CDH3-210ENST00000569117 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
CDH3-210ENST00000569117 PDE8AO60658 829 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 ST5P78524 1137 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 MTX1Q13505 466 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 SLC10A5Q5PT55 438 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 JARID2Q92833 1246 aaPredicted RBP13.06□□□□□ -0.32
CDH3-210ENST00000569117 BICC1Q9H694 974 aaKnown RBP13.06□□□□□ -0.32
CDH3-210ENST00000569117 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
CDH3-210ENST00000569117 SPEF2Q9C093 1822 aa13.05□□□□□ -0.32
CDH3-210ENST00000569117 NPHP1O15259 732 aa13.05□□□□□ -0.32
CDH3-210ENST00000569117 GTF2E1P29083 439 aaPredicted RBP13.05□□□□□ -0.32
CDH3-210ENST00000569117 CTSWP56202 376 aa13.05□□□□□ -0.32
CDH3-210ENST00000569117 FOXO4P98177 505 aa13.05□□□□□ -0.32
CDH3-210ENST00000569117 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
CDH3-210ENST00000569117 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
CDH3-210ENST00000569117 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
CDH3-210ENST00000569117 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
CDH3-210ENST00000569117 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
CDH3-210ENST00000569117 CSF1RP07333 972 aa13.03□□□□□ -0.32
CDH3-210ENST00000569117 POLD1P28340 1107 aa13.03□□□□□ -0.32
CDH3-210ENST00000569117 RPAP2Q8IXW5 612 aaPredicted RBP13.03□□□□□ -0.32
CDH3-210ENST00000569117 EFCAB3Q8N7B9 438 aa13.03□□□□□ -0.32
CDH3-210ENST00000569117 PCDHB15Q9Y5E8 787 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms