RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 DLK2Q6UY11 383 aa14.32□□□□□ -0.12
TMX3-210ENST00000569053 PPP1R42Q7Z4L9 355 aa14.32□□□□□ -0.12
TMX3-210ENST00000569053 NLRP10Q86W26 655 aa14.32□□□□□ -0.12
TMX3-210ENST00000569053 XAGE3Q8WTP9 111 aa14.32□□□□□ -0.12
TMX3-210ENST00000569053 NLRP3Q96P20 1036 aa14.32□□□□□ -0.12
TMX3-210ENST00000569053 RTFDC1Q9BY42 306 aaPredicted RBP14.32□□□□□ -0.12
TMX3-210ENST00000569053 DDX60Q8IY21 1712 aaKnown RBP14.32□□□□□ -0.12
TMX3-210ENST00000569053 YDJCA8MPS7 323 aa14.31□□□□□ -0.12
TMX3-210ENST00000569053 PARP10Q53GL7 1025 aa14.31□□□□□ -0.12
TMX3-210ENST00000569053 GPRC5DQ9NZD1 345 aa14.31□□□□□ -0.12
TMX3-210ENST00000569053 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
TMX3-210ENST00000569053 NEFMP07197 916 aa14.3□□□□□ -0.12
TMX3-210ENST00000569053 GMPSP49915 693 aaPredicted RBP14.3□□□□□ -0.12
TMX3-210ENST00000569053 USP50Q70EL3 339 aaPredicted RBP14.3□□□□□ -0.12
TMX3-210ENST00000569053 NIM1KQ8IY84 436 aa14.3□□□□□ -0.12
TMX3-210ENST00000569053 CCDC146Q8IYE0 955 aa14.3□□□□□ -0.12
TMX3-210ENST00000569053 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
TMX3-210ENST00000569053 MAPK8IP3Q9UPT6 1336 aa14.3□□□□□ -0.12
TMX3-210ENST00000569053 AOC2O75106 756 aa14.29□□□□□ -0.12
TMX3-210ENST00000569053 LMOD1P29536 600 aaPredicted RBP14.29□□□□□ -0.12
TMX3-210ENST00000569053 TCIRG1Q13488 830 aa14.29□□□□□ -0.12
TMX3-210ENST00000569053 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
TMX3-210ENST00000569053 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
TMX3-210ENST00000569053 CAPNS2Q96L46 248 aa14.29□□□□□ -0.12
TMX3-210ENST00000569053 GLIS2Q9BZE0 524 aaPredicted RBP14.29□□□□□ -0.12
TMX3-210ENST00000569053 ZNRF3Q9ULT6 936 aa14.29□□□□□ -0.12
TMX3-210ENST00000569053 TLL2Q9Y6L7 1015 aa14.29□□□□□ -0.12
TMX3-210ENST00000569053 LRRC37AA6NMS7 1700 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 HAX1O00165 279 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 CHL1O00533 1208 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 RAD17O75943 681 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 AIDAQ96BJ3 306 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 CHPF2Q9P2E5 772 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 PGAP2Q9UHJ9 254 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 TSKSQ9UJT2 592 aa14.28□□□□□ -0.12
TMX3-210ENST00000569053 GRM1Q13255 1194 aa14.27□□□□□ -0.13
TMX3-210ENST00000569053 NEUROD2Q15784 382 aa14.27□□□□□ -0.13
TMX3-210ENST00000569053 MPNDQ8N594 471 aa14.27□□□□□ -0.13
TMX3-210ENST00000569053 ZIC5Q96T25 663 aa14.27□□□□□ -0.13
TMX3-210ENST00000569053 KCNQ5Q9NR82 932 aa14.27□□□□□ -0.13
TMX3-210ENST00000569053 ADARB2Q9NS39 739 aaKnown RBP14.27□□□□□ -0.13
TMX3-210ENST00000569053 POLR2AP24928 1970 aaKnown RBP14.27□□□□□ -0.13
TMX3-210ENST00000569053 BBOX1O75936 387 aa14.26□□□□□ -0.13
TMX3-210ENST00000569053 EGFRP00533 1210 aa14.26□□□□□ -0.13
TMX3-210ENST00000569053 GRAPQ13588 217 aa14.26□□□□□ -0.13
TMX3-210ENST00000569053 DPP8Q6V1X1 898 aaPredicted RBP14.26□□□□□ -0.13
TMX3-210ENST00000569053 GRAPLQ8TC17 118 aaPredicted RBP14.26□□□□□ -0.13
TMX3-210ENST00000569053 CELF1Q92879 486 aaKnown RBP14.26□□□□□ -0.13
TMX3-210ENST00000569053 ABHD8Q96I13 439 aa14.26□□□□□ -0.13
TMX3-210ENST00000569053 GPR101Q96P66 508 aaPredicted RBP14.26□□□□□ -0.13
TMX3-210ENST00000569053 VPS33BQ9H267 617 aa14.26□□□□□ -0.13
TMX3-210ENST00000569053 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
TMX3-210ENST00000569053 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
TMX3-210ENST00000569053 ATP5J2-PTCD1G3V325 749 aa14.25□□□□□ -0.13
TMX3-210ENST00000569053 MAP2K1Q02750 393 aaPredicted RBP14.25□□□□□ -0.13
TMX3-210ENST00000569053 CIAPIN1Q6FI81 312 aa14.25□□□□□ -0.13
TMX3-210ENST00000569053 SAPCD2Q86UD0 394 aa14.25□□□□□ -0.13
TMX3-210ENST00000569053 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
TMX3-210ENST00000569053 PNNQ9H307 717 aaKnown RBP14.25□□□□□ -0.13
TMX3-210ENST00000569053 ZBTB12Q9Y330 459 aaPredicted RBP14.25□□□□□ -0.13
TMX3-210ENST00000569053 SH3TC1Q8TE82 1336 aa14.24□□□□□ -0.13
TMX3-210ENST00000569053 SCN9AQ15858 1988 aa14.24□□□□□ -0.13
TMX3-210ENST00000569053 CELF2O95319 508 aaKnown RBP14.24□□□□□ -0.13
TMX3-210ENST00000569053 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
TMX3-210ENST00000569053 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
TMX3-210ENST00000569053 FAM89AQ96GI7 184 aa14.24□□□□□ -0.13
TMX3-210ENST00000569053 LAS1LQ9Y4W2 734 aaKnown RBP14.24□□□□□ -0.13
TMX3-210ENST00000569053 GPSM2P81274 684 aa14.23□□□□□ -0.13
TMX3-210ENST00000569053 HSP90AB3PQ58FF7 597 aa14.23□□□□□ -0.13
TMX3-210ENST00000569053 RTL5Q5HYW3 569 aaPredicted RBP14.23□□□□□ -0.13
TMX3-210ENST00000569053 DDX46Q7L014 1031 aaKnown RBP14.23□□□□□ -0.13
TMX3-210ENST00000569053 SUPT20HQ8NEM7 779 aa14.23□□□□□ -0.13
TMX3-210ENST00000569053 POLLQ9UGP5 575 aa14.23□□□□□ -0.13
TMX3-210ENST00000569053 CNOT7Q9UIV1 285 aaKnown RBP14.23□□□□□ -0.13
TMX3-210ENST00000569053 CASP8AP2Q9UKL3 1982 aa14.23□□□□□ -0.13
TMX3-210ENST00000569053 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
TMX3-210ENST00000569053 PSMD14O00487 310 aa14.22□□□□□ -0.13
TMX3-210ENST00000569053 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
TMX3-210ENST00000569053 RALBP1Q15311 655 aa14.22□□□□□ -0.13
TMX3-210ENST00000569053 SF3B3Q15393 1217 aaKnown RBP14.22□□□□□ -0.13
TMX3-210ENST00000569053 SAMD7Q7Z3H4 446 aa14.22□□□□□ -0.13
TMX3-210ENST00000569053 PLBD2Q8NHP8 589 aa14.22□□□□□ -0.13
TMX3-210ENST00000569053 DBNDD1Q9H9R9 158 aa14.22□□□□□ -0.13
TMX3-210ENST00000569053 ADAMTS8Q9UP79 889 aa14.22□□□□□ -0.13
TMX3-210ENST00000569053 RIMBP2O15034 1052 aa14.21□□□□□ -0.13
TMX3-210ENST00000569053 HDGFL1Q5TGJ6 251 aa14.21□□□□□ -0.13
TMX3-210ENST00000569053 USP48Q86UV5 1035 aa14.21□□□□□ -0.13
TMX3-210ENST00000569053 MICALL2Q8IY33 904 aa14.21□□□□□ -0.13
TMX3-210ENST00000569053 BCL2L13Q9BXK5 485 aa14.21□□□□□ -0.13
TMX3-210ENST00000569053 ZNF408Q9H9D4 720 aa14.21□□□□□ -0.13
TMX3-210ENST00000569053 ASTN2O75129 1339 aaPredicted RBP14.2□□□□□ -0.14
TMX3-210ENST00000569053 ECE1P42892 770 aa14.2□□□□□ -0.14
TMX3-210ENST00000569053 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
TMX3-210ENST00000569053 ANKRD13DQ6ZTN6 518 aa14.2□□□□□ -0.14
TMX3-210ENST00000569053 JARID2Q92833 1246 aaPredicted RBP14.2□□□□□ -0.14
TMX3-210ENST00000569053 RUNDC1Q96C34 613 aa14.2□□□□□ -0.14
TMX3-210ENST00000569053 PHAXQ9H814 394 aaKnown RBP14.2□□□□□ -0.14
TMX3-210ENST00000569053 SEC31BQ9NQW1 1179 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms