RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 USP50Q70EL3 339 aaPredicted RBP17.75■□□□□ 0.43
CNOT1-215ENST00000569020 HYPKQ9NX55 129 aa17.75■□□□□ 0.43
CNOT1-215ENST00000569020 ZNRF3Q9ULT6 936 aa17.75■□□□□ 0.43
CNOT1-215ENST00000569020 LRRC37AA6NMS7 1700 aa17.75■□□□□ 0.43
CNOT1-215ENST00000569020 VEGFBP49765 207 aa17.74■□□□□ 0.43
CNOT1-215ENST00000569020 DEFB115Q30KQ5 88 aa17.74■□□□□ 0.43
CNOT1-215ENST00000569020 DUSP27Q5VZP5 1158 aa17.74■□□□□ 0.43
CNOT1-215ENST00000569020 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
CNOT1-215ENST00000569020 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
CNOT1-215ENST00000569020 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
CNOT1-215ENST00000569020 ISCA1Q9BUE6 129 aa17.73■□□□□ 0.43
CNOT1-215ENST00000569020 ABT1Q9ULW3 272 aaKnown RBP17.73■□□□□ 0.43
CNOT1-215ENST00000569020 PCNTO95613 3336 aa17.72■□□□□ 0.43
CNOT1-215ENST00000569020 RASSF10A6NK89 507 aa17.72■□□□□ 0.43
CNOT1-215ENST00000569020 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
CNOT1-215ENST00000569020 CXCL9Q07325 125 aa17.72■□□□□ 0.43
CNOT1-215ENST00000569020 KIAA2012Q0VF49 1180 aa17.72■□□□□ 0.43
CNOT1-215ENST00000569020 AIDAQ96BJ3 306 aa17.72■□□□□ 0.43
CNOT1-215ENST00000569020 ADARB2Q9NS39 739 aaKnown RBP17.72■□□□□ 0.43
CNOT1-215ENST00000569020 GPRC5DQ9NZD1 345 aa17.72■□□□□ 0.43
CNOT1-215ENST00000569020 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
CNOT1-215ENST00000569020 CAPN15O75808 1086 aa17.71■□□□□ 0.43
CNOT1-215ENST00000569020 GNAI1P63096 354 aa17.71■□□□□ 0.43
CNOT1-215ENST00000569020 CIAPIN1Q6FI81 312 aa17.71■□□□□ 0.43
CNOT1-215ENST00000569020 FAM89AQ96GI7 184 aa17.71■□□□□ 0.43
CNOT1-215ENST00000569020 APAF1O14727 1248 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 FOXN1O15353 648 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 ZNF853P0CG23 659 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 TNIP1Q15025 636 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
CNOT1-215ENST00000569020 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 IFT57Q9NWB7 429 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 CDHR2Q9BYE9 1310 aa17.7■□□□□ 0.42
CNOT1-215ENST00000569020 GOLGA2Q08379 1002 aa17.69■□□□□ 0.42
CNOT1-215ENST00000569020 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
CNOT1-215ENST00000569020 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
CNOT1-215ENST00000569020 RAD17O75943 681 aa17.68■□□□□ 0.42
CNOT1-215ENST00000569020 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
CNOT1-215ENST00000569020 TRIM28Q13263 835 aaKnown RBP17.68■□□□□ 0.42
CNOT1-215ENST00000569020 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
CNOT1-215ENST00000569020 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
CNOT1-215ENST00000569020 ELL2O00472 640 aaPredicted RBP17.67■□□□□ 0.42
CNOT1-215ENST00000569020 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
CNOT1-215ENST00000569020 CTCFP49711 727 aaPredicted RBP17.67■□□□□ 0.42
CNOT1-215ENST00000569020 FMR1Q06787 632 aaKnown RBP eCLIP17.67■□□□□ 0.421e-9■□□□□ 9.1
CNOT1-215ENST00000569020 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
CNOT1-215ENST00000569020 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
CNOT1-215ENST00000569020 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
CNOT1-215ENST00000569020 PRDM10Q9NQV6 1147 aa17.67■□□□□ 0.42
CNOT1-215ENST00000569020 WBP1LQ9NX94 342 aa17.67■□□□□ 0.42
CNOT1-215ENST00000569020 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
CNOT1-215ENST00000569020 ECE1P42892 770 aa17.66■□□□□ 0.42
CNOT1-215ENST00000569020 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
CNOT1-215ENST00000569020 MAP2K1Q02750 393 aaPredicted RBP17.66■□□□□ 0.42
CNOT1-215ENST00000569020 PAXIP1Q6ZW49 1069 aaPredicted RBP17.66■□□□□ 0.42
CNOT1-215ENST00000569020 YDJCA8MPS7 323 aa17.65■□□□□ 0.42
CNOT1-215ENST00000569020 TRAF5O00463 557 aa17.65■□□□□ 0.42
CNOT1-215ENST00000569020 ZBTB38Q8NAP3 1195 aaPredicted RBP17.65■□□□□ 0.42
CNOT1-215ENST00000569020 EYA3Q99504 573 aa17.65■□□□□ 0.42
CNOT1-215ENST00000569020 MYD88Q99836 296 aa17.65■□□□□ 0.42
CNOT1-215ENST00000569020 THSD7BQ9C0I4 1608 aa17.65■□□□□ 0.42
CNOT1-215ENST00000569020 C6orf229H3BNL8 230 aa17.64■□□□□ 0.41
CNOT1-215ENST00000569020 H7C1D1 291 aa17.64■□□□□ 0.41
CNOT1-215ENST00000569020 RPS8P62241 208 aaKnown RBP17.64■□□□□ 0.41
CNOT1-215ENST00000569020 CST9Q5W186 159 aa17.64■□□□□ 0.41
CNOT1-215ENST00000569020 ZC3H15Q8WU90 426 aaKnown RBP17.64■□□□□ 0.41
CNOT1-215ENST00000569020 CNOT7Q9UIV1 285 aaKnown RBP17.64■□□□□ 0.41
CNOT1-215ENST00000569020 COL4A1P02462 1669 aa17.64■□□□□ 0.41
CNOT1-215ENST00000569020 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
CNOT1-215ENST00000569020 GPSM2P81274 684 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 CCDC30Q5VVM6 783 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 CCDC191Q8NCU4 936 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 CAPNS2Q96L46 248 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 DBNDD1Q9H9R9 158 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 PGAP2Q9UHJ9 254 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 TLL2Q9Y6L7 1015 aa17.63■□□□□ 0.41
CNOT1-215ENST00000569020 LBX1P52954 281 aa17.62■□□□□ 0.41
CNOT1-215ENST00000569020 GRM1Q13255 1194 aa17.62■□□□□ 0.41
CNOT1-215ENST00000569020 MICALL2Q8IY33 904 aa17.62■□□□□ 0.41
CNOT1-215ENST00000569020 C8orf58Q8NAV2 365 aa17.62■□□□□ 0.41
CNOT1-215ENST00000569020 GLIS2Q9BZE0 524 aaPredicted RBP17.62■□□□□ 0.41
CNOT1-215ENST00000569020 POLLQ9UGP5 575 aa17.62■□□□□ 0.41
CNOT1-215ENST00000569020 MYH3P11055 1940 aa17.62■□□□□ 0.41
CNOT1-215ENST00000569020 PSMD14O00487 310 aa17.61■□□□□ 0.41
CNOT1-215ENST00000569020 PDE8AO60658 829 aa17.61■□□□□ 0.41
CNOT1-215ENST00000569020 CELF2O95319 508 aaKnown RBP17.61■□□□□ 0.41
CNOT1-215ENST00000569020 PCCAP05165 728 aaPredicted RBP17.61■□□□□ 0.41
CNOT1-215ENST00000569020 HIRAP54198 1017 aaPredicted RBP17.61■□□□□ 0.41
CNOT1-215ENST00000569020 CCDC152Q4G0S7 254 aa17.61■□□□□ 0.41
CNOT1-215ENST00000569020 CYP4F22Q6NT55 531 aa17.61■□□□□ 0.41
CNOT1-215ENST00000569020 CDC37L1Q7L3B6 337 aa17.61■□□□□ 0.41
CNOT1-215ENST00000569020 DPF2Q92785 391 aa17.61■□□□□ 0.41
CNOT1-215ENST00000569020 BEGAINQ9BUH8 593 aa17.61■□□□□ 0.41
CNOT1-215ENST00000569020 METTL22Q9BUU2 404 aaPredicted RBP17.61■□□□□ 0.41
CNOT1-215ENST00000569020 CWC25Q9NXE8 425 aaPredicted RBP17.61■□□□□ 0.41
CNOT1-215ENST00000569020 ZBTB12Q9Y330 459 aaPredicted RBP17.61■□□□□ 0.41
CNOT1-215ENST00000569020 POLR2AP24928 1970 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms