RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
CPNE7-209ENST00000568977 COL4A1P02462 1669 aa24.01■■□□□ 1.43
CPNE7-209ENST00000568977 EAPPQ56P03 285 aaPredicted RBP24■■□□□ 1.43
CPNE7-209ENST00000568977 DPP8Q6V1X1 898 aaPredicted RBP24■■□□□ 1.43
CPNE7-209ENST00000568977 SUPT20HQ8NEM7 779 aa24■■□□□ 1.43
CPNE7-209ENST00000568977 RTFDC1Q9BY42 306 aaPredicted RBP24■■□□□ 1.43
CPNE7-209ENST00000568977 CHMP4AQ9BY43 222 aa24■■□□□ 1.43
CPNE7-209ENST00000568977 GJA3Q9Y6H8 435 aa24■■□□□ 1.43
CPNE7-209ENST00000568977 SF3B3Q15393 1217 aaKnown RBP23.99■■□□□ 1.43
CPNE7-209ENST00000568977 MPNDQ8N594 471 aa23.99■■□□□ 1.43
CPNE7-209ENST00000568977 MYD88Q99836 296 aa23.99■■□□□ 1.43
CPNE7-209ENST00000568977 IRS4O14654 1257 aaPredicted RBP23.98■■□□□ 1.43
CPNE7-209ENST00000568977 JMYQ8N9B5 988 aa23.98■■□□□ 1.43
CPNE7-209ENST00000568977 VPS33BQ9H267 617 aa23.98■■□□□ 1.43
CPNE7-209ENST00000568977 DDX58O95786 925 aaKnown RBP23.97■■□□□ 1.43
CPNE7-209ENST00000568977 IL16Q14005 1332 aa23.97■■□□□ 1.43
CPNE7-209ENST00000568977 TMC4Q7Z404 712 aa23.97■■□□□ 1.43
CPNE7-209ENST00000568977 SCNN1DP51172 638 aa23.96■■□□□ 1.43
CPNE7-209ENST00000568977 NCBP3Q53F19 620 aaKnown RBP23.96■■□□□ 1.43
CPNE7-209ENST00000568977 PNMA8AQ86V59 439 aaPredicted RBP23.96■■□□□ 1.43
CPNE7-209ENST00000568977 ZBTB38Q8NAP3 1195 aaPredicted RBP23.96■■□□□ 1.43
CPNE7-209ENST00000568977 CELF1Q92879 486 aaKnown RBP23.96■■□□□ 1.43
CPNE7-209ENST00000568977 PASKQ96RG2 1323 aa23.95■■□□□ 1.42
CPNE7-209ENST00000568977 LMOD1P29536 600 aaPredicted RBP23.95■■□□□ 1.42
CPNE7-209ENST00000568977 KIAA2012Q0VF49 1180 aa23.95■■□□□ 1.42
CPNE7-209ENST00000568977 CCDC191Q8NCU4 936 aa23.95■■□□□ 1.42
CPNE7-209ENST00000568977 METTL22Q9BUU2 404 aaPredicted RBP23.95■■□□□ 1.42
CPNE7-209ENST00000568977 CLEC11AQ9Y240 323 aa23.95■■□□□ 1.42
CPNE7-209ENST00000568977 TWISTNBQ3B726 338 aaPredicted RBP23.94■■□□□ 1.42
CPNE7-209ENST00000568977 STK31Q9BXU1 1019 aa23.94■■□□□ 1.42
CPNE7-209ENST00000568977 CREBZFQ9NS37 354 aa23.94■■□□□ 1.42
CPNE7-209ENST00000568977 ZNRF3Q9ULT6 936 aa23.94■■□□□ 1.42
CPNE7-209ENST00000568977 MAP3K2Q9Y2U5 619 aa23.94■■□□□ 1.42
CPNE7-209ENST00000568977 CWC25Q9NXE8 425 aaPredicted RBP23.93■■□□□ 1.42
CPNE7-209ENST00000568977 FANCIQ9NVI1 1328 aa23.92■■□□□ 1.42
CPNE7-209ENST00000568977 PCCAP05165 728 aaPredicted RBP23.92■■□□□ 1.42
CPNE7-209ENST00000568977 HSP90B1P14625 803 aaKnown RBP23.92■■□□□ 1.42
CPNE7-209ENST00000568977 ITGBL1O95965 494 aaPredicted RBP23.91■■□□□ 1.42
CPNE7-209ENST00000568977 EPS15P42566 896 aa23.91■■□□□ 1.42
CPNE7-209ENST00000568977 CXCL9Q07325 125 aa23.91■■□□□ 1.42
CPNE7-209ENST00000568977 KSR2Q6VAB6 950 aa23.91■■□□□ 1.42
CPNE7-209ENST00000568977 MYH3P11055 1940 aa23.9■■□□□ 1.42
CPNE7-209ENST00000568977 PI4KAP2A4QPH2 592 aa23.9■■□□□ 1.42
CPNE7-209ENST00000568977 MAP1SQ66K74 1059 aaPredicted RBP23.9■■□□□ 1.42
CPNE7-209ENST00000568977 PI4KAP1Q8N8J0 262 aa23.9■■□□□ 1.42
CPNE7-209ENST00000568977 SALL2Q9Y467 1007 aaPredicted RBP23.9■■□□□ 1.42
CPNE7-209ENST00000568977 CACNA1FO60840 1977 aa23.89■■□□□ 1.42
CPNE7-209ENST00000568977 JARID2Q92833 1246 aaPredicted RBP23.89■■□□□ 1.41
CPNE7-209ENST00000568977 NSFL1CQ9UNZ2 370 aaKnown RBP23.89■■□□□ 1.41
CPNE7-209ENST00000568977 PDE8AO60658 829 aa23.88■■□□□ 1.41
CPNE7-209ENST00000568977 RPS8P62241 208 aaKnown RBP23.88■■□□□ 1.41
CPNE7-209ENST00000568977 CIAPIN1Q6FI81 312 aa23.88■■□□□ 1.41
CPNE7-209ENST00000568977 CNTROBQ8N137 903 aa23.88■■□□□ 1.41
CPNE7-209ENST00000568977 GPRC5DQ9NZD1 345 aa23.88■■□□□ 1.41
CPNE7-209ENST00000568977 CDHR2Q9BYE9 1310 aa23.87■■□□□ 1.41
CPNE7-209ENST00000568977 IGKV5-2P06315 115 aa23.87■■□□□ 1.41
CPNE7-209ENST00000568977 GPSM2P81274 684 aa23.87■■□□□ 1.41
CPNE7-209ENST00000568977 CCDC152Q4G0S7 254 aa23.87■■□□□ 1.41
CPNE7-209ENST00000568977 G2E3Q7L622 706 aa23.87■■□□□ 1.41
CPNE7-209ENST00000568977 WDR63Q8IWG1 891 aa23.87■■□□□ 1.41
CPNE7-209ENST00000568977 SEC31BQ9NQW1 1179 aa23.87■■□□□ 1.41
CPNE7-209ENST00000568977 MKRN1Q9UHC7 482 aaKnown RBP23.87■■□□□ 1.41
CPNE7-209ENST00000568977 YDJCA8MPS7 323 aa23.86■■□□□ 1.41
CPNE7-209ENST00000568977 RAD17O75943 681 aa23.86■■□□□ 1.41
CPNE7-209ENST00000568977 SLC4A2P04920 1241 aa23.86■■□□□ 1.41
CPNE7-209ENST00000568977 NEXNQ0ZGT2 675 aa23.86■■□□□ 1.41
CPNE7-209ENST00000568977 USP50Q70EL3 339 aaPredicted RBP23.86■■□□□ 1.41
CPNE7-209ENST00000568977 TMEM88BA6NKF7 163 aa23.85■■□□□ 1.41
CPNE7-209ENST00000568977 GMPSP49915 693 aaPredicted RBP23.85■■□□□ 1.41
CPNE7-209ENST00000568977 WASHC4Q2M389 1173 aa23.85■■□□□ 1.41
CPNE7-209ENST00000568977 CCDC85AQ96PX6 553 aaPredicted RBP23.85■■□□□ 1.41
CPNE7-209ENST00000568977 ADARB2Q9NS39 739 aaKnown RBP23.85■■□□□ 1.41
CPNE7-209ENST00000568977 CNTNAP1P78357 1384 aa23.85■■□□□ 1.41
CPNE7-209ENST00000568977 C6orf229H3BNL8 230 aa23.84■■□□□ 1.41
CPNE7-209ENST00000568977 CWF19L2Q2TBE0 894 aaKnown RBP23.84■■□□□ 1.41
CPNE7-209ENST00000568977 FAM9BQ8IZU0 186 aa23.84■■□□□ 1.41
CPNE7-209ENST00000568977 POLLQ9UGP5 575 aa23.84■■□□□ 1.41
CPNE7-209ENST00000568977 SPEF2Q9C093 1822 aa23.84■■□□□ 1.41
CPNE7-209ENST00000568977 NEURL1BA8MQ27 555 aa23.83■■□□□ 1.41
CPNE7-209ENST00000568977 FLIIQ13045 1269 aa23.83■■□□□ 1.41
CPNE7-209ENST00000568977 TNIP1Q15025 636 aa23.83■■□□□ 1.41
CPNE7-209ENST00000568977 DBNDD1Q9H9R9 158 aa23.83■■□□□ 1.41
CPNE7-209ENST00000568977 PCNTO95613 3336 aa23.83■■□□□ 1.41
CPNE7-209ENST00000568977 RIMBP2O15034 1052 aa23.82■■□□□ 1.4
CPNE7-209ENST00000568977 CTSWP56202 376 aa23.82■■□□□ 1.4
CPNE7-209ENST00000568977 IFFO2Q5TF58 517 aa23.82■■□□□ 1.4
CPNE7-209ENST00000568977 TBC1D16Q8TBP0 767 aa23.82■■□□□ 1.4
CPNE7-209ENST00000568977 GPR101Q96P66 508 aaPredicted RBP23.82■■□□□ 1.4
CPNE7-209ENST00000568977 EYA3Q99504 573 aa23.82■■□□□ 1.4
CPNE7-209ENST00000568977 BCL2L13Q9BXK5 485 aa23.82■■□□□ 1.4
CPNE7-209ENST00000568977 TRPM7Q96QT4 1865 aa23.81■■□□□ 1.4
CPNE7-209ENST00000568977 HSPA1AP0DMV8 641 aaKnown RBP23.81■■□□□ 1.4
CPNE7-209ENST00000568977 HSPA1BP0DMV9 641 aaKnown RBP23.81■■□□□ 1.4
CPNE7-209ENST00000568977 EXOSC9Q06265 439 aaKnown RBP23.81■■□□□ 1.4
CPNE7-209ENST00000568977 PODXL2Q9NZ53 605 aa23.81■■□□□ 1.4
CPNE7-209ENST00000568977 SCN9AQ15858 1988 aa23.81■■□□□ 1.4
CPNE7-209ENST00000568977 VAMP4O75379 141 aa23.8■■□□□ 1.4
CPNE7-209ENST00000568977 FKBP5Q13451 457 aaPredicted RBP23.8■■□□□ 1.4
CPNE7-209ENST00000568977 SPINK5Q9NQ38 1064 aaPredicted RBP23.8■■□□□ 1.4
CPNE7-209ENST00000568977 ECE2O60344 883 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms