RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 GPR153Q6NV75 609 aa11.58□□□□□ -0.56
CNOT1-214ENST00000568917 KIF6Q6ZMV9 814 aa11.58□□□□□ -0.56
CNOT1-214ENST00000568917 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
CNOT1-214ENST00000568917 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
CNOT1-214ENST00000568917 KIF1BPQ96EK5 621 aa11.58□□□□□ -0.56
CNOT1-214ENST00000568917 PALLDQ8WX93 1383 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 H7C1W4 665 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 SLC34A2O95436 690 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
CNOT1-214ENST00000568917 SIK1P57059 783 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 TCIRG1Q13488 830 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 SLC4A9Q96Q91 983 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
CNOT1-214ENST00000568917 ISCA1Q9BUE6 129 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 UPF2Q9HAU5 1272 aaKnown RBP11.57□□□□□ -0.56
CNOT1-214ENST00000568917 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
CNOT1-214ENST00000568917 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
CNOT1-214ENST00000568917 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
CNOT1-214ENST00000568917 HMGB2P26583 209 aaKnown RBP11.56□□□□□ -0.56
CNOT1-214ENST00000568917 CASP7P55210 303 aa11.56□□□□□ -0.56
CNOT1-214ENST00000568917 MFSD10Q14728 455 aa11.56□□□□□ -0.56
CNOT1-214ENST00000568917 TTC22Q5TAA0 569 aa11.56□□□□□ -0.56
CNOT1-214ENST00000568917 GIGYF2Q6Y7W6 1299 aaKnown RBP11.56□□□□□ -0.56
CNOT1-214ENST00000568917 TTLL7Q6ZT98 887 aa11.56□□□□□ -0.56
CNOT1-214ENST00000568917 NPM2Q86SE8 214 aaKnown RBP11.56□□□□□ -0.56
CNOT1-214ENST00000568917 SBF2Q86WG5 1849 aa11.56□□□□□ -0.56
CNOT1-214ENST00000568917 SALL3Q9BXA9 1300 aa11.56□□□□□ -0.56
CNOT1-214ENST00000568917 A0A087WZG4 1122 aa11.55□□□□□ -0.56
CNOT1-214ENST00000568917 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
CNOT1-214ENST00000568917 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
CNOT1-214ENST00000568917 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
CNOT1-214ENST00000568917 BICC1Q9H694 974 aaKnown RBP11.55□□□□□ -0.56
CNOT1-214ENST00000568917 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
CNOT1-214ENST00000568917 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
CNOT1-214ENST00000568917 STAP2Q9UGK3 403 aa11.55□□□□□ -0.56
CNOT1-214ENST00000568917 EXOC6BQ9Y2D4 811 aa11.55□□□□□ -0.56
CNOT1-214ENST00000568917 BTAF1O14981 1849 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 NUP98P52948 1817 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 TUBGCP6Q96RT7 1819 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 ATP6V1AP38606 617 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 EIF5P55010 431 aaKnown RBP11.54□□□□□ -0.56
CNOT1-214ENST00000568917 RHPN1Q8TCX5 695 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
CNOT1-214ENST00000568917 LY75O60449 1722 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 CDHR2Q9BYE9 1310 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 CNTNAP4Q9C0A0 1308 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 USP42Q9H9J4 1324 aaKnown RBP11.53□□□□□ -0.56
CNOT1-214ENST00000568917 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
CNOT1-214ENST00000568917 MX1P20591 662 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 PDE1AP54750 535 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 ARSIQ5FYB1 569 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 PLA2G12BQ9BX93 195 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 COPRSQ9NQ92 184 aa11.53□□□□□ -0.56
CNOT1-214ENST00000568917 A0A0G2JS52 829 aa11.52□□□□□ -0.57
CNOT1-214ENST00000568917 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
CNOT1-214ENST00000568917 CRKLP46109 303 aaKnown RBP11.52□□□□□ -0.57
CNOT1-214ENST00000568917 MYT1Q01538 1121 aa11.52□□□□□ -0.57
CNOT1-214ENST00000568917 RC3H1Q5TC82 1133 aaKnown RBP11.52□□□□□ -0.57
CNOT1-214ENST00000568917 INTS5Q6P9B9 1019 aaKnown RBP11.52□□□□□ -0.57
CNOT1-214ENST00000568917 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
CNOT1-214ENST00000568917 CLASRPQ8N2M8 674 aaKnown RBP11.52□□□□□ -0.57
CNOT1-214ENST00000568917 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.575e-7■■■■□ 20
CNOT1-214ENST00000568917 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
CNOT1-214ENST00000568917 IPO9Q96P70 1041 aaKnown RBP11.52□□□□□ -0.57
CNOT1-214ENST00000568917 ZBTB3Q9H5J0 574 aa11.52□□□□□ -0.57
CNOT1-214ENST00000568917 BCORQ6W2J9 1755 aa11.52□□□□□ -0.57
CNOT1-214ENST00000568917 MYH14Q7Z406 1995 aaKnown RBP11.51□□□□□ -0.57
CNOT1-214ENST00000568917 TTC41PQ6P2S7 1318 aa11.51□□□□□ -0.57
CNOT1-214ENST00000568917 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-214ENST00000568917 CDC45O75419 566 aa11.51□□□□□ -0.57
CNOT1-214ENST00000568917 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
CNOT1-214ENST00000568917 G3BP1Q13283 466 aaKnown RBP eCLIP11.51□□□□□ -0.574e-7■■■■□ 21.3
CNOT1-214ENST00000568917 ZNF772Q68DY9 489 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-214ENST00000568917 CASC1Q6TDU7 716 aa11.51□□□□□ -0.57
CNOT1-214ENST00000568917 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
CNOT1-214ENST00000568917 ZBTB38Q8NAP3 1195 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-214ENST00000568917 AK7Q96M32 723 aa11.51□□□□□ -0.57
CNOT1-214ENST00000568917 QTRT2Q9H974 415 aaKnown RBP11.51□□□□□ -0.57
CNOT1-214ENST00000568917 MYH3P11055 1940 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 KCNQ2O43526 872 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 HSP90B1P14625 803 aaKnown RBP11.5□□□□□ -0.57
CNOT1-214ENST00000568917 FOXO4P98177 505 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 CLEC4GQ6UXB4 293 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 C16orf71Q8IYS4 520 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-214ENST00000568917 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
CNOT1-214ENST00000568917 GPATCH3Q96I76 525 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 PCDHGA4Q9Y5G9 962 aa11.5□□□□□ -0.57
CNOT1-214ENST00000568917 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
CNOT1-214ENST00000568917 APBB1O00213 710 aa11.49□□□□□ -0.57
CNOT1-214ENST00000568917 ERC2O15083 957 aa11.49□□□□□ -0.57
CNOT1-214ENST00000568917 RFX5P48382 616 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-214ENST00000568917 EMP3P54852 163 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms