RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 EXOC6BQ9Y2D4 811 aa12.89□□□□□ -0.35
CDH11-214ENST00000568340 SF3B3Q15393 1217 aaKnown RBP12.88□□□□□ -0.35
CDH11-214ENST00000568340 PRR5LQ6MZQ0 368 aa12.88□□□□□ -0.35
CDH11-214ENST00000568340 KLHDC4Q8TBB5 520 aa12.88□□□□□ -0.35
CDH11-214ENST00000568340 GREM2Q9H772 168 aa12.88□□□□□ -0.35
CDH11-214ENST00000568340 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
CDH11-214ENST00000568340 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
CDH11-214ENST00000568340 SASH1O94885 1247 aa12.87□□□□□ -0.35
CDH11-214ENST00000568340 HCLS1P14317 486 aaPredicted RBP12.87□□□□□ -0.35
CDH11-214ENST00000568340 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
CDH11-214ENST00000568340 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
CDH11-214ENST00000568340 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
CDH11-214ENST00000568340 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
CDH11-214ENST00000568340 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
CDH11-214ENST00000568340 KLRG2A4D1S0 409 aaPredicted RBP12.86□□□□□ -0.35
CDH11-214ENST00000568340 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
CDH11-214ENST00000568340 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
CDH11-214ENST00000568340 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
CDH11-214ENST00000568340 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
CDH11-214ENST00000568340 SERPINB2P05120 415 aa12.85□□□□□ -0.35
CDH11-214ENST00000568340 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
CDH11-214ENST00000568340 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
CDH11-214ENST00000568340 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
CDH11-214ENST00000568340 ZNF609O15014 1411 aa12.85□□□□□ -0.35
CDH11-214ENST00000568340 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
CDH11-214ENST00000568340 LRRC37AA6NMS7 1700 aa12.85□□□□□ -0.35
CDH11-214ENST00000568340 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
CDH11-214ENST00000568340 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
CDH11-214ENST00000568340 SURF6O75683 361 aaKnown RBP12.84□□□□□ -0.35
CDH11-214ENST00000568340 CIAO1O76071 339 aa12.84□□□□□ -0.35
CDH11-214ENST00000568340 ITGA6P23229 1130 aa12.84□□□□□ -0.35
CDH11-214ENST00000568340 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
CDH11-214ENST00000568340 RHPN1Q8TCX5 695 aa12.84□□□□□ -0.35
CDH11-214ENST00000568340 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
CDH11-214ENST00000568340 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
CDH11-214ENST00000568340 KIAA1551Q9HCM1 1747 aa12.84□□□□□ -0.35
CDH11-214ENST00000568340 LTBP1Q14766 1721 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 EYA2O00167 538 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 MMP10P09238 476 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 LRRC24Q50LG9 513 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 ANKRD45Q5TZF3 282 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
CDH11-214ENST00000568340 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 KIF1BPQ96EK5 621 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 PUS3Q9BZE2 481 aaKnown RBP12.83□□□□□ -0.36
CDH11-214ENST00000568340 SEC31BQ9NQW1 1179 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
CDH11-214ENST00000568340 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
CDH11-214ENST00000568340 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
CDH11-214ENST00000568340 TPTE2Q6XPS3 522 aa12.82□□□□□ -0.36
CDH11-214ENST00000568340 PLEKHM2Q8IWE5 1019 aa12.82□□□□□ -0.36
CDH11-214ENST00000568340 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
CDH11-214ENST00000568340 CCDC85AQ96PX6 553 aaPredicted RBP12.82□□□□□ -0.36
CDH11-214ENST00000568340 LRRCC1Q9C099 1032 aa12.82□□□□□ -0.36
CDH11-214ENST00000568340 IFIT5Q13325 482 aaKnown RBP12.81□□□□□ -0.36
CDH11-214ENST00000568340 CCDC152Q4G0S7 254 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 HSP90AB4PQ58FF6 505 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 SLC16A10Q8TF71 515 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 SGIP1Q9BQI5 828 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 SIL1Q9H173 461 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
CDH11-214ENST00000568340 TAF1P21675 1872 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 SNED1Q8TER0 1413 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 DLEC1Q9Y238 1755 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
CDH11-214ENST00000568340 GSPT1P15170 499 aaKnown RBP12.8□□□□□ -0.36
CDH11-214ENST00000568340 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
CDH11-214ENST00000568340 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
CDH11-214ENST00000568340 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 ERC1Q8IUD2 1116 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 CELF1Q92879 486 aaKnown RBP12.8□□□□□ -0.36
CDH11-214ENST00000568340 EAF2Q96CJ1 260 aaPredicted RBP12.8□□□□□ -0.36
CDH11-214ENST00000568340 IL1RAPL2Q9NP60 686 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 GPR108Q9NPR9 543 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
CDH11-214ENST00000568340 TFCP2Q12800 502 aa12.79□□□□□ -0.36
CDH11-214ENST00000568340 CCDC57Q2TAC2 916 aa12.79□□□□□ -0.36
CDH11-214ENST00000568340 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
CDH11-214ENST00000568340 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
CDH11-214ENST00000568340 AOX1Q06278 1338 aa12.79□□□□□ -0.36
CDH11-214ENST00000568340 DUOX1Q9NRD9 1551 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 APBB1O00213 710 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 RGS3P49796 1198 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 PDE1AP54750 535 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 TNNI3KQ59H18 835 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
CDH11-214ENST00000568340 FPGT-TNNI3KV9GXZ4 949 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 IRS2Q9Y4H2 1338 aa12.78□□□□□ -0.36
CDH11-214ENST00000568340 FGFR2P21802 821 aa12.77□□□□□ -0.37
CDH11-214ENST00000568340 ST5P78524 1137 aa12.77□□□□□ -0.37
CDH11-214ENST00000568340 G3BP1Q13283 466 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDH11-214ENST00000568340 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.37
CDH11-214ENST00000568340 MSH5O43196 834 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms