RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.24
CNOT1-213ENST00000568158 PTPRCP08575 1304 aa16.51■□□□□ 0.23
CNOT1-213ENST00000568158 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
CNOT1-213ENST00000568158 BCAR3O75815 825 aa16.51■□□□□ 0.23
CNOT1-213ENST00000568158 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
CNOT1-213ENST00000568158 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
CNOT1-213ENST00000568158 SBF1O95248 1867 aa16.5■□□□□ 0.23
CNOT1-213ENST00000568158 PPEF1O14829 653 aaPredicted RBP16.5■□□□□ 0.23
CNOT1-213ENST00000568158 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
CNOT1-213ENST00000568158 BBOX1O75936 387 aa16.5■□□□□ 0.23
CNOT1-213ENST00000568158 HSP90B1P14625 803 aaKnown RBP16.5■□□□□ 0.23
CNOT1-213ENST00000568158 BRPF1P55201 1214 aaPredicted RBP16.5■□□□□ 0.23
CNOT1-213ENST00000568158 GRAPQ13588 217 aa16.5■□□□□ 0.23
CNOT1-213ENST00000568158 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
CNOT1-213ENST00000568158 GRAPLQ8TC17 118 aaPredicted RBP16.5■□□□□ 0.23
CNOT1-213ENST00000568158 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
CNOT1-213ENST00000568158 RNF181Q9P0P0 153 aa16.5■□□□□ 0.23
CNOT1-213ENST00000568158 CCDC88AQ3V6T2 1871 aa16.5■□□□□ 0.23
CNOT1-213ENST00000568158 SOGA3Q5TF21 947 aa16.49■□□□□ 0.23
CNOT1-213ENST00000568158 TTLL11Q8NHH1 800 aa16.49■□□□□ 0.23
CNOT1-213ENST00000568158 FER1L6Q2WGJ9 1857 aa16.48■□□□□ 0.23
CNOT1-213ENST00000568158 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
CNOT1-213ENST00000568158 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
CNOT1-213ENST00000568158 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
CNOT1-213ENST00000568158 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
CNOT1-213ENST00000568158 LMNB1P20700 586 aa16.47■□□□□ 0.23
CNOT1-213ENST00000568158 CTSWP56202 376 aa16.47■□□□□ 0.23
CNOT1-213ENST00000568158 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
CNOT1-213ENST00000568158 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
CNOT1-213ENST00000568158 ZNF784Q8NCA9 323 aaPredicted RBP16.47■□□□□ 0.23
CNOT1-213ENST00000568158 PLA2G12BQ9BX93 195 aa16.47■□□□□ 0.23
CNOT1-213ENST00000568158 TAOK3Q9H2K8 898 aa16.47■□□□□ 0.23
CNOT1-213ENST00000568158 TNNQ9UQP3 1299 aa16.47■□□□□ 0.23
CNOT1-213ENST00000568158 GRM8O00222 908 aa16.46■□□□□ 0.23
CNOT1-213ENST00000568158 FOXO4P98177 505 aa16.46■□□□□ 0.23
CNOT1-213ENST00000568158 FKBP4Q02790 459 aaKnown RBP eCLIP16.46■□□□□ 0.23
CNOT1-213ENST00000568158 EPHA10Q5JZY3 1008 aa16.46■□□□□ 0.23
CNOT1-213ENST00000568158 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
CNOT1-213ENST00000568158 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-213ENST00000568158 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
CNOT1-213ENST00000568158 GREM2Q9H772 168 aa16.46■□□□□ 0.23
CNOT1-213ENST00000568158 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-213ENST00000568158 CSF1RP07333 972 aa16.45■□□□□ 0.22
CNOT1-213ENST00000568158 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
CNOT1-213ENST00000568158 ZNF526Q8TF50 670 aaPredicted RBP16.45■□□□□ 0.22
CNOT1-213ENST00000568158 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
CNOT1-213ENST00000568158 COL4A1P02462 1669 aa16.45■□□□□ 0.22
CNOT1-213ENST00000568158 LTBP3Q9NS15 1303 aa16.45■□□□□ 0.22
CNOT1-213ENST00000568158 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
CNOT1-213ENST00000568158 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
CNOT1-213ENST00000568158 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
CNOT1-213ENST00000568158 MPNDQ8N594 471 aa16.43■□□□□ 0.22
CNOT1-213ENST00000568158 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
CNOT1-213ENST00000568158 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
CNOT1-213ENST00000568158 SNED1Q8TER0 1413 aa16.43■□□□□ 0.22
CNOT1-213ENST00000568158 IPO8O15397 1037 aaKnown RBP16.42■□□□□ 0.22
CNOT1-213ENST00000568158 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 CLUAP1Q96AJ1 413 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 PSMD1Q99460 953 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 MYH3P11055 1940 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 UTYO14607 1347 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
CNOT1-213ENST00000568158 ITGA6P23229 1130 aa16.41■□□□□ 0.22
CNOT1-213ENST00000568158 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
CNOT1-213ENST00000568158 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
CNOT1-213ENST00000568158 GPSM2P81274 684 aa16.41■□□□□ 0.22
CNOT1-213ENST00000568158 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
CNOT1-213ENST00000568158 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
CNOT1-213ENST00000568158 TMC4Q7Z404 712 aa16.41■□□□□ 0.22
CNOT1-213ENST00000568158 NSFL1CQ9UNZ2 370 aaKnown RBP16.41■□□□□ 0.22
CNOT1-213ENST00000568158 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
CNOT1-213ENST00000568158 TRIM27P14373 513 aa16.4■□□□□ 0.22
CNOT1-213ENST00000568158 ATF7IPQ6VMQ6 1270 aa16.4■□□□□ 0.22
CNOT1-213ENST00000568158 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
CNOT1-213ENST00000568158 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
CNOT1-213ENST00000568158 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
CNOT1-213ENST00000568158 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
CNOT1-213ENST00000568158 RTFDC1Q9BY42 306 aaPredicted RBP16.39■□□□□ 0.21
CNOT1-213ENST00000568158 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
CNOT1-213ENST00000568158 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
CNOT1-213ENST00000568158 IFIT5Q13325 482 aaKnown RBP16.38■□□□□ 0.21
CNOT1-213ENST00000568158 AOC3Q16853 763 aa16.38■□□□□ 0.21
CNOT1-213ENST00000568158 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
CNOT1-213ENST00000568158 BICC1Q9H694 974 aaKnown RBP16.38■□□□□ 0.21
CNOT1-213ENST00000568158 GPBP1L1Q9HC44 474 aaPredicted RBP16.38■□□□□ 0.21
CNOT1-213ENST00000568158 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
CNOT1-213ENST00000568158 POLLQ9UGP5 575 aa16.38■□□□□ 0.21
CNOT1-213ENST00000568158 MINPP1Q9UNW1 487 aa16.38■□□□□ 0.21
CNOT1-213ENST00000568158 WTIPA6NIX2 430 aaPredicted RBP16.37■□□□□ 0.21
CNOT1-213ENST00000568158 C6orf229H3BNL8 230 aa16.37■□□□□ 0.21
CNOT1-213ENST00000568158 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
CNOT1-213ENST00000568158 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
CNOT1-213ENST00000568158 LARGE2Q8N3Y3 721 aa16.37■□□□□ 0.21
CNOT1-213ENST00000568158 SUPT20HQ8NEM7 779 aa16.37■□□□□ 0.21
CNOT1-213ENST00000568158 GPR101Q96P66 508 aaPredicted RBP16.37■□□□□ 0.21
CNOT1-213ENST00000568158 GLTPD2A6NH11 291 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms