RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 LAMB2P55268 1798 aa12.94□□□□□ -0.34
TCF4-236ENST00000567880 IRS4O14654 1257 aaPredicted RBP12.94□□□□□ -0.34
TCF4-236ENST00000567880 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
TCF4-236ENST00000567880 KLHDC4Q8TBB5 520 aa12.94□□□□□ -0.34
TCF4-236ENST00000567880 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
TCF4-236ENST00000567880 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 MSH5O43196 834 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 PDE4AP27815 886 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 CAMKK2Q96RR4 588 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 SIL1Q9H173 461 aa12.93□□□□□ -0.34
TCF4-236ENST00000567880 BAG6P46379 1132 aa12.92□□□□□ -0.34
TCF4-236ENST00000567880 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
TCF4-236ENST00000567880 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
TCF4-236ENST00000567880 NTSR2O95665 410 aa12.92□□□□□ -0.34
TCF4-236ENST00000567880 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
TCF4-236ENST00000567880 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
TCF4-236ENST00000567880 PDE8AO60658 829 aa12.91□□□□□ -0.34
TCF4-236ENST00000567880 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
TCF4-236ENST00000567880 HSP90AB4PQ58FF6 505 aa12.91□□□□□ -0.34
TCF4-236ENST00000567880 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
TCF4-236ENST00000567880 NPHP1O15259 732 aa12.9□□□□□ -0.34
TCF4-236ENST00000567880 GYS1P13807 737 aa12.9□□□□□ -0.34
TCF4-236ENST00000567880 CTSWP56202 376 aa12.9□□□□□ -0.34
TCF4-236ENST00000567880 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
TCF4-236ENST00000567880 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
TCF4-236ENST00000567880 C16orf71Q8IYS4 520 aaPredicted RBP12.9□□□□□ -0.34
TCF4-236ENST00000567880 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
TCF4-236ENST00000567880 NOP58Q9Y2X3 529 aaKnown RBP12.9□□□□□ -0.34
TCF4-236ENST00000567880 RAB11FIP3O75154 756 aa12.9□□□□□ -0.35
TCF4-236ENST00000567880 RFX5P48382 616 aaPredicted RBP12.9□□□□□ -0.35
TCF4-236ENST00000567880 PTPN12Q05209 780 aaKnown RBP12.9□□□□□ -0.35
TCF4-236ENST00000567880 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.35
TCF4-236ENST00000567880 ERFEQ4G0M1 354 aa12.9□□□□□ -0.35
TCF4-236ENST00000567880 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.35
TCF4-236ENST00000567880 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.35
TCF4-236ENST00000567880 ZMYND15Q9H091 742 aa12.9□□□□□ -0.35
TCF4-236ENST00000567880 TAF1P21675 1872 aa12.89□□□□□ -0.35
TCF4-236ENST00000567880 NFIXQ14938 502 aa12.89□□□□□ -0.35
TCF4-236ENST00000567880 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
TCF4-236ENST00000567880 TTLL11Q8NHH1 800 aa12.89□□□□□ -0.35
TCF4-236ENST00000567880 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
TCF4-236ENST00000567880 ZNF594Q96JF6 807 aaPredicted RBP12.89□□□□□ -0.35
TCF4-236ENST00000567880 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
TCF4-236ENST00000567880 IGSF3O75054 1194 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 CSF1RP07333 972 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
TCF4-236ENST00000567880 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 ERC1Q8IUD2 1116 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
TCF4-236ENST00000567880 NYXQ9GZU5 481 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 GREM2Q9H772 168 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 COPRSQ9NQ92 184 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 ITGA6P23229 1130 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 STK32BQ9NY57 414 aa12.88□□□□□ -0.35
TCF4-236ENST00000567880 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
TCF4-236ENST00000567880 ABCC12Q96J65 1359 aa12.87□□□□□ -0.35
TCF4-236ENST00000567880 QSER1Q2KHR3 1735 aa12.87□□□□□ -0.35
TCF4-236ENST00000567880 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
TCF4-236ENST00000567880 SLC15A2Q16348 729 aa12.87□□□□□ -0.35
TCF4-236ENST00000567880 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
TCF4-236ENST00000567880 SASH1O94885 1247 aa12.86□□□□□ -0.35
TCF4-236ENST00000567880 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
TCF4-236ENST00000567880 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
TCF4-236ENST00000567880 CLASRPQ8N2M8 674 aaKnown RBP12.86□□□□□ -0.35
TCF4-236ENST00000567880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
TCF4-236ENST00000567880 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
TCF4-236ENST00000567880 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
TCF4-236ENST00000567880 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
TCF4-236ENST00000567880 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
TCF4-236ENST00000567880 CNBD1Q8NA66 436 aa12.85□□□□□ -0.35
TCF4-236ENST00000567880 PUS3Q9BZE2 481 aaKnown RBP12.85□□□□□ -0.35
TCF4-236ENST00000567880 AK9Q5TCS8 1911 aa12.85□□□□□ -0.35
TCF4-236ENST00000567880 TFCP2Q12800 502 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 MSL1Q68DK7 614 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 EYA2O00167 538 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 SERPINB2P05120 415 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 MX1P20591 662 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 TM4SF1P30408 202 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 ATG9AQ7Z3C6 839 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 AACSQ86V21 672 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
TCF4-236ENST00000567880 DDR1Q08345 913 aa12.83□□□□□ -0.36
TCF4-236ENST00000567880 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
TCF4-236ENST00000567880 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.36
TCF4-236ENST00000567880 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
TCF4-236ENST00000567880 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
TCF4-236ENST00000567880 CIAO1O76071 339 aa12.82□□□□□ -0.36
TCF4-236ENST00000567880 IFIT2P09913 472 aaKnown RBP12.82□□□□□ -0.36
TCF4-236ENST00000567880 IL15P40933 162 aaPredicted RBP12.82□□□□□ -0.36
TCF4-236ENST00000567880 PDE1AP54750 535 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms