RNA–Protein interactions for RNA: ENST00000567743.5

NAE1-218, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 1 (best)

Gene NAE1, Length 1,460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-218ENST00000567743 PDE8AO60658 829 aa22.51■■□□□ 1.19
NAE1-218ENST00000567743 RARSP54136 660 aaKnown RBP22.51■■□□□ 1.19
NAE1-218ENST00000567743 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
NAE1-218ENST00000567743 DDX46Q7L014 1031 aaKnown RBP22.51■■□□□ 1.19
NAE1-218ENST00000567743 UBE3BQ7Z3V4 1068 aa22.51■■□□□ 1.19
NAE1-218ENST00000567743 TAOK3Q9H2K8 898 aa22.51■■□□□ 1.19
NAE1-218ENST00000567743 LTBP1Q14766 1721 aa22.5■■□□□ 1.19
NAE1-218ENST00000567743 HSP90B1P14625 803 aaKnown RBP22.5■■□□□ 1.19
NAE1-218ENST00000567743 LMNB1P20700 586 aa22.5■■□□□ 1.19
NAE1-218ENST00000567743 GRAPQ13588 217 aa22.5■■□□□ 1.19
NAE1-218ENST00000567743 GRAPLQ8TC17 118 aaPredicted RBP22.5■■□□□ 1.19
NAE1-218ENST00000567743 RNF181Q9P0P0 153 aa22.5■■□□□ 1.19
NAE1-218ENST00000567743 SLC4A10Q6U841 1118 aa22.48■■□□□ 1.19
NAE1-218ENST00000567743 ATP6V0A2Q9Y487 856 aa22.48■■□□□ 1.19
NAE1-218ENST00000567743 CTSWP56202 376 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.19
NAE1-218ENST00000567743 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 RTKN2Q8IZC4 609 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 CELF1Q92879 486 aaKnown RBP22.47■■□□□ 1.19
NAE1-218ENST00000567743 DUOX1Q9NRD9 1551 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 ALDH1L1O75891 902 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 BBOX1O75936 387 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 PLA2G12BQ9BX93 195 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 SRCIN1Q9C0H9 1055 aa22.47■■□□□ 1.19
NAE1-218ENST00000567743 CCDC152Q4G0S7 254 aa22.46■■□□□ 1.19
NAE1-218ENST00000567743 RTL9Q8NET4 1388 aa22.45■■□□□ 1.18
NAE1-218ENST00000567743 ZC3H4Q9UPT8 1303 aaKnown RBP22.45■■□□□ 1.18
NAE1-218ENST00000567743 TTLL11Q8NHH1 800 aa22.45■■□□□ 1.18
NAE1-218ENST00000567743 CCDC85AQ96PX6 553 aaPredicted RBP22.45■■□□□ 1.18
NAE1-218ENST00000567743 PSMD1Q99460 953 aa22.45■■□□□ 1.18
NAE1-218ENST00000567743 SEC31BQ9NQW1 1179 aa22.45■■□□□ 1.18
NAE1-218ENST00000567743 NOB1Q9ULX3 412 aaKnown RBP22.45■■□□□ 1.18
NAE1-218ENST00000567743 COL4A5P29400 1685 aa22.44■■□□□ 1.18
NAE1-218ENST00000567743 GRM8O00222 908 aa22.44■■□□□ 1.18
NAE1-218ENST00000567743 SP8Q8IXZ3 490 aa22.44■■□□□ 1.18
NAE1-218ENST00000567743 GRIPAP1Q4V328 841 aa22.43■■□□□ 1.18
NAE1-218ENST00000567743 TMC4Q7Z404 712 aa22.43■■□□□ 1.18
NAE1-218ENST00000567743 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
NAE1-218ENST00000567743 GREM2Q9H772 168 aa22.42■■□□□ 1.18
NAE1-218ENST00000567743 ZNF277Q9NRM2 450 aaPredicted RBP22.42■■□□□ 1.18
NAE1-218ENST00000567743 UTYO14607 1347 aa22.42■■□□□ 1.18
NAE1-218ENST00000567743 BCAR3O75815 825 aa22.41■■□□□ 1.18
NAE1-218ENST00000567743 A0A1B0GUL6 1792 aa22.41■■□□□ 1.18
NAE1-218ENST00000567743 RPS8P62241 208 aaKnown RBP22.41■■□□□ 1.18
NAE1-218ENST00000567743 CSF1RP07333 972 aa22.4■■□□□ 1.18
NAE1-218ENST00000567743 FOXO4P98177 505 aa22.4■■□□□ 1.18
NAE1-218ENST00000567743 ZNF526Q8TF50 670 aaPredicted RBP22.4■■□□□ 1.18
NAE1-218ENST00000567743 RTFDC1Q9BY42 306 aaPredicted RBP22.4■■□□□ 1.18
NAE1-218ENST00000567743 C9orf78Q9NZ63 289 aaPredicted RBP22.4■■□□□ 1.18
NAE1-218ENST00000567743 NBPF7P0C2Y1 421 aaPredicted RBP22.39■■□□□ 1.17
NAE1-218ENST00000567743 IARSP41252 1262 aaKnown RBP22.39■■□□□ 1.17
NAE1-218ENST00000567743 FAM161AQ3B820 660 aa22.39■■□□□ 1.17
NAE1-218ENST00000567743 EPHA10Q5JZY3 1008 aa22.39■■□□□ 1.17
NAE1-218ENST00000567743 ARHGAP45Q92619 1136 aa22.39■■□□□ 1.17
NAE1-218ENST00000567743 API5Q9BZZ5 524 aaKnown RBP22.39■■□□□ 1.17
NAE1-218ENST00000567743 TMX4Q9H1E5 349 aaPredicted RBP22.38■■□□□ 1.17
NAE1-218ENST00000567743 MPNDQ8N594 471 aa22.37■■□□□ 1.17
NAE1-218ENST00000567743 KAZALD1Q96I82 304 aa22.37■■□□□ 1.17
NAE1-218ENST00000567743 GPBP1L1Q9HC44 474 aaPredicted RBP22.37■■□□□ 1.17
NAE1-218ENST00000567743 WDR90Q96KV7 1748 aa22.37■■□□□ 1.17
NAE1-218ENST00000567743 DPP8Q6V1X1 898 aaPredicted RBP22.36■■□□□ 1.17
NAE1-218ENST00000567743 ANKRD18AQ8IVF6 992 aa22.36■■□□□ 1.17
NAE1-218ENST00000567743 SUCLG2Q96I99 432 aa22.36■■□□□ 1.17
NAE1-218ENST00000567743 CDC5LQ99459 802 aaKnown RBP22.36■■□□□ 1.17
NAE1-218ENST00000567743 USP44Q9H0E7 712 aa22.36■■□□□ 1.17
NAE1-218ENST00000567743 TRIM27P14373 513 aa22.35■■□□□ 1.17
NAE1-218ENST00000567743 ITGA6P23229 1130 aa22.35■■□□□ 1.17
NAE1-218ENST00000567743 CCT4P50991 539 aaKnown RBP22.35■■□□□ 1.17
NAE1-218ENST00000567743 GPSM2P81274 684 aa22.34■■□□□ 1.17
NAE1-218ENST00000567743 GLTPD2A6NH11 291 aa22.34■■□□□ 1.17
NAE1-218ENST00000567743 ATF7IPQ6VMQ6 1270 aa22.34■■□□□ 1.17
NAE1-218ENST00000567743 SUPT20HQ8NEM7 779 aa22.34■■□□□ 1.17
NAE1-218ENST00000567743 TNNQ9UQP3 1299 aa22.34■■□□□ 1.17
NAE1-218ENST00000567743 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.16
NAE1-218ENST00000567743 FRAT1Q92837 279 aaPredicted RBP22.33■■□□□ 1.16
NAE1-218ENST00000567743 BSDC1Q9NW68 430 aaPredicted RBP22.33■■□□□ 1.16
NAE1-218ENST00000567743 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.16
NAE1-218ENST00000567743 NSFL1CQ9UNZ2 370 aaKnown RBP22.33■■□□□ 1.16
NAE1-218ENST00000567743 KDM2BQ8NHM5 1336 aa22.33■■□□□ 1.16
NAE1-218ENST00000567743 FZD9O00144 591 aa22.32■■□□□ 1.16
NAE1-218ENST00000567743 IPO8O15397 1037 aaKnown RBP22.32■■□□□ 1.16
NAE1-218ENST00000567743 AOC3Q16853 763 aa22.32■■□□□ 1.16
NAE1-218ENST00000567743 VPS33BQ9H267 617 aa22.32■■□□□ 1.16
NAE1-218ENST00000567743 NMRK2Q9NPI5 230 aa22.32■■□□□ 1.16
NAE1-218ENST00000567743 POLLQ9UGP5 575 aa22.32■■□□□ 1.16
NAE1-218ENST00000567743 ZNF541Q9H0D2 1346 aa22.32■■□□□ 1.16
NAE1-218ENST00000567743 PPIP5K2O43314 1243 aa22.31■■□□□ 1.16
NAE1-218ENST00000567743 KIAA2012Q0VF49 1180 aa22.31■■□□□ 1.16
NAE1-218ENST00000567743 RABL6Q3YEC7 729 aaPredicted RBP22.31■■□□□ 1.16
NAE1-218ENST00000567743 INTS3Q68E01 1043 aaKnown RBP22.31■■□□□ 1.16
NAE1-218ENST00000567743 LARGE2Q8N3Y3 721 aa22.31■■□□□ 1.16
NAE1-218ENST00000567743 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
NAE1-218ENST00000567743 KIF3CO14782 793 aa22.3■■□□□ 1.16
NAE1-218ENST00000567743 ANKRD44Q8N8A2 993 aa22.3■■□□□ 1.16
NAE1-218ENST00000567743 TBC1D16Q8TBP0 767 aa22.3■■□□□ 1.16
NAE1-218ENST00000567743 BICC1Q9H694 974 aaKnown RBP22.3■■□□□ 1.16
NAE1-218ENST00000567743 SCN4AP35499 1836 aa22.3■■□□□ 1.16
NAE1-218ENST00000567743 IGHMBP2P38935 993 aaKnown RBP22.29■■□□□ 1.16
NAE1-218ENST00000567743 IFIT5Q13325 482 aaKnown RBP22.29■■□□□ 1.16
NAE1-218ENST00000567743 JDP2Q8WYK2 163 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms