RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 VPS33BQ9H267 617 aa30.01■■■□□ 2.39
CNEP1R1-209ENST00000567712 HSPA8P11142 646 aaKnown RBP30■■■□□ 2.39
CNEP1R1-209ENST00000567712 GMPSP49915 693 aaPredicted RBP30■■■□□ 2.39
CNEP1R1-209ENST00000567712 DPP8Q6V1X1 898 aaPredicted RBP30■■■□□ 2.39
CNEP1R1-209ENST00000567712 LAS1LQ9Y4W2 734 aaKnown RBP30■■■□□ 2.39
CNEP1R1-209ENST00000567712 LRRC37AA6NMS7 1700 aa29.99■■■□□ 2.39
CNEP1R1-209ENST00000567712 DDX10Q13206 875 aaKnown RBP29.99■■■□□ 2.39
CNEP1R1-209ENST00000567712 TMX4Q9H1E5 349 aaPredicted RBP29.99■■■□□ 2.39
CNEP1R1-209ENST00000567712 ADARB2Q9NS39 739 aaKnown RBP29.99■■■□□ 2.39
CNEP1R1-209ENST00000567712 SH3TC1Q8TE82 1336 aa29.98■■■□□ 2.39
CNEP1R1-209ENST00000567712 SHTN1A0MZ66 631 aa29.98■■■□□ 2.39
CNEP1R1-209ENST00000567712 YDJCA8MPS7 323 aa29.98■■■□□ 2.39
CNEP1R1-209ENST00000567712 KIAA2012Q0VF49 1180 aa29.98■■■□□ 2.39
CNEP1R1-209ENST00000567712 GRAPQ13588 217 aa29.98■■■□□ 2.39
CNEP1R1-209ENST00000567712 SUPT20HQ8NEM7 779 aa29.98■■■□□ 2.39
CNEP1R1-209ENST00000567712 GRAPLQ8TC17 118 aaPredicted RBP29.98■■■□□ 2.39
CNEP1R1-209ENST00000567712 MYBBP1AQ9BQG0 1328 aaKnown RBP29.97■■■□□ 2.39
CNEP1R1-209ENST00000567712 RAD17O75943 681 aa29.97■■■□□ 2.39
CNEP1R1-209ENST00000567712 CYP4F22Q6NT55 531 aa29.97■■■□□ 2.39
CNEP1R1-209ENST00000567712 DDX46Q7L014 1031 aaKnown RBP29.97■■■□□ 2.39
CNEP1R1-209ENST00000567712 HIRAP54198 1017 aaPredicted RBP29.96■■■□□ 2.39
CNEP1R1-209ENST00000567712 CAPNS2Q96L46 248 aa29.96■■■□□ 2.39
CNEP1R1-209ENST00000567712 CIAPIN1Q6FI81 312 aa29.95■■■□□ 2.39
CNEP1R1-209ENST00000567712 RUNDC1Q96C34 613 aa29.95■■■□□ 2.39
CNEP1R1-209ENST00000567712 ISCA1Q9BUE6 129 aa29.95■■■□□ 2.39
CNEP1R1-209ENST00000567712 ATP5J2-PTCD1G3V325 749 aa29.94■■■□□ 2.38
CNEP1R1-209ENST00000567712 PLBD2Q8NHP8 589 aa29.94■■■□□ 2.38
CNEP1R1-209ENST00000567712 GLIS2Q9BZE0 524 aaPredicted RBP29.94■■■□□ 2.38
CNEP1R1-209ENST00000567712 ADAMTS8Q9UP79 889 aa29.94■■■□□ 2.38
CNEP1R1-209ENST00000567712 TLL2Q9Y6L7 1015 aa29.94■■■□□ 2.38
CNEP1R1-209ENST00000567712 POLR2AP24928 1970 aaKnown RBP29.94■■■□□ 2.38
CNEP1R1-209ENST00000567712 MAP2K1Q02750 393 aaPredicted RBP29.93■■■□□ 2.38
CNEP1R1-209ENST00000567712 GRM1Q13255 1194 aa29.93■■■□□ 2.38
CNEP1R1-209ENST00000567712 HDGFL1Q5TGJ6 251 aa29.93■■■□□ 2.38
CNEP1R1-209ENST00000567712 PAXIP1Q6ZW49 1069 aaPredicted RBP29.93■■■□□ 2.38
CNEP1R1-209ENST00000567712 TRPM4Q8TD43 1214 aa29.93■■■□□ 2.38
CNEP1R1-209ENST00000567712 CELF1Q92879 486 aaKnown RBP29.93■■■□□ 2.38
CNEP1R1-209ENST00000567712 FAM89AQ96GI7 184 aa29.93■■■□□ 2.38
CNEP1R1-209ENST00000567712 ANKRD13DQ6ZTN6 518 aa29.92■■■□□ 2.38
CNEP1R1-209ENST00000567712 PGAP2Q9UHJ9 254 aa29.92■■■□□ 2.38
CNEP1R1-209ENST00000567712 GPR101Q96P66 508 aaPredicted RBP29.91■■■□□ 2.38
CNEP1R1-209ENST00000567712 AOC2O75106 756 aa29.9■■■□□ 2.38
CNEP1R1-209ENST00000567712 CELF2O95319 508 aaKnown RBP29.89■■■□□ 2.38
CNEP1R1-209ENST00000567712 RTL5Q5HYW3 569 aaPredicted RBP29.89■■■□□ 2.38
CNEP1R1-209ENST00000567712 BCL2L13Q9BXK5 485 aa29.89■■■□□ 2.38
CNEP1R1-209ENST00000567712 SF3B3Q15393 1217 aaKnown RBP29.88■■■□□ 2.37
CNEP1R1-209ENST00000567712 DUSP27Q5VZP5 1158 aa29.88■■■□□ 2.37
CNEP1R1-209ENST00000567712 DLK2Q6UY11 383 aa29.88■■■□□ 2.37
CNEP1R1-209ENST00000567712 CNOT7Q9UIV1 285 aaKnown RBP29.88■■■□□ 2.37
CNEP1R1-209ENST00000567712 ZBTB12Q9Y330 459 aaPredicted RBP29.88■■■□□ 2.37
CNEP1R1-209ENST00000567712 HOXB7P09629 217 aa29.87■■■□□ 2.37
CNEP1R1-209ENST00000567712 ECE1P42892 770 aa29.87■■■□□ 2.37
CNEP1R1-209ENST00000567712 TNIP1Q15025 636 aa29.87■■■□□ 2.37
CNEP1R1-209ENST00000567712 SAPCD2Q86UD0 394 aa29.87■■■□□ 2.37
CNEP1R1-209ENST00000567712 MBIPQ9NS73 344 aa29.87■■■□□ 2.37
CNEP1R1-209ENST00000567712 DBF4Q9UBU7 674 aaPredicted RBP29.87■■■□□ 2.37
CNEP1R1-209ENST00000567712 POLLQ9UGP5 575 aa29.87■■■□□ 2.37
CNEP1R1-209ENST00000567712 WDR43Q15061 677 aaKnown RBP eCLIP29.86■■■□□ 2.37
CNEP1R1-209ENST00000567712 CFAP44Q96MT7 982 aa29.86■■■□□ 2.37
CNEP1R1-209ENST00000567712 DBNDD1Q9H9R9 158 aa29.86■■■□□ 2.37
CNEP1R1-209ENST00000567712 KCNQ5Q9NR82 932 aa29.86■■■□□ 2.37
CNEP1R1-209ENST00000567712 TSKSQ9UJT2 592 aa29.86■■■□□ 2.37
CNEP1R1-209ENST00000567712 CDHR2Q9BYE9 1310 aa29.86■■■□□ 2.37
CNEP1R1-209ENST00000567712 SCN9AQ15858 1988 aa29.86■■■□□ 2.37
CNEP1R1-209ENST00000567712 GPSM2P81274 684 aa29.85■■■□□ 2.37
CNEP1R1-209ENST00000567712 TMC4Q7Z404 712 aa29.85■■■□□ 2.37
CNEP1R1-209ENST00000567712 NSFL1CQ9UNZ2 370 aaKnown RBP29.85■■■□□ 2.37
CNEP1R1-209ENST00000567712 PSMD14O00487 310 aa29.84■■■□□ 2.37
CNEP1R1-209ENST00000567712 RIMBP2O15034 1052 aa29.84■■■□□ 2.37
CNEP1R1-209ENST00000567712 MICALL2Q8IY33 904 aa29.84■■■□□ 2.37
CNEP1R1-209ENST00000567712 EGFRP00533 1210 aa29.83■■■□□ 2.37
CNEP1R1-209ENST00000567712 ZNF853P0CG23 659 aa29.83■■■□□ 2.37
CNEP1R1-209ENST00000567712 WASHC4Q2M389 1173 aa29.83■■■□□ 2.37
CNEP1R1-209ENST00000567712 SAMD7Q7Z3H4 446 aa29.83■■■□□ 2.37
CNEP1R1-209ENST00000567712 IRS4O14654 1257 aaPredicted RBP29.82■■■□□ 2.36
CNEP1R1-209ENST00000567712 ZC3H15Q8WU90 426 aaKnown RBP29.82■■■□□ 2.36
CNEP1R1-209ENST00000567712 ABHD8Q96I13 439 aa29.82■■■□□ 2.36
CNEP1R1-209ENST00000567712 PHAXQ9H814 394 aaKnown RBP29.82■■■□□ 2.36
CNEP1R1-209ENST00000567712 ZNF408Q9H9D4 720 aa29.82■■■□□ 2.36
CNEP1R1-209ENST00000567712 HYPKQ9NX55 129 aa29.82■■■□□ 2.36
CNEP1R1-209ENST00000567712 CASP8AP2Q9UKL3 1982 aa29.82■■■□□ 2.36
CNEP1R1-209ENST00000567712 RTL9Q8NET4 1388 aa29.8■■■□□ 2.36
CNEP1R1-209ENST00000567712 TRIM28Q13263 835 aaKnown RBP29.8■■■□□ 2.36
CNEP1R1-209ENST00000567712 DOK7Q18PE1 504 aa29.8■■■□□ 2.36
CNEP1R1-209ENST00000567712 SEC31BQ9NQW1 1179 aa29.8■■■□□ 2.36
CNEP1R1-209ENST00000567712 C6orf229H3BNL8 230 aa29.79■■■□□ 2.36
CNEP1R1-209ENST00000567712 MAP2K2P36507 400 aa29.79■■■□□ 2.36
CNEP1R1-209ENST00000567712 CDC37L1Q7L3B6 337 aa29.79■■■□□ 2.36
CNEP1R1-209ENST00000567712 USP48Q86UV5 1035 aa29.79■■■□□ 2.36
CNEP1R1-209ENST00000567712 ZIC5Q96T25 663 aa29.79■■■□□ 2.36
CNEP1R1-209ENST00000567712 H7C1D1 291 aa29.78■■■□□ 2.36
CNEP1R1-209ENST00000567712 ELL2O00472 640 aaPredicted RBP29.78■■■□□ 2.36
CNEP1R1-209ENST00000567712 DPF2Q92785 391 aa29.78■■■□□ 2.36
CNEP1R1-209ENST00000567712 ECE2O60344 883 aa29.77■■■□□ 2.36
CNEP1R1-209ENST00000567712 RPS8P62241 208 aaKnown RBP29.77■■■□□ 2.36
CNEP1R1-209ENST00000567712 TBC1D10BQ4KMP7 808 aaPredicted RBP29.77■■■□□ 2.36
CNEP1R1-209ENST00000567712 TBC1D16Q8TBP0 767 aa29.77■■■□□ 2.36
CNEP1R1-209ENST00000567712 JARID2Q92833 1246 aaPredicted RBP29.77■■■□□ 2.36
CNEP1R1-209ENST00000567712 APAF1O14727 1248 aa29.76■■■□□ 2.35
CNEP1R1-209ENST00000567712 HHIPL1Q96JK4 782 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms