RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	CCDC93	Q567U6	631 aa		21.08	■□□□□ 0.97
INO80E-210	ENST00000567705	GRAPL	Q8TC17	118 aa	Predicted RBP	21.08	■□□□□ 0.97
INO80E-210	ENST00000567705	RTL9	Q8NET4	1388 aa		21.08	■□□□□ 0.96
INO80E-210	ENST00000567705	ALDH1L1	O75891	902 aa		21.07	■□□□□ 0.96
INO80E-210	ENST00000567705	LMNB1	P20700	586 aa		21.07	■□□□□ 0.96
INO80E-210	ENST00000567705	CC2D2B	Q6DHV5	1058 aa		21.07	■□□□□ 0.96
INO80E-210	ENST00000567705	SMC4	Q9NTJ3	1288 aa		21.07	■□□□□ 0.96
INO80E-210	ENST00000567705	ATP6V0A2	Q9Y487	856 aa		21.07	■□□□□ 0.96
INO80E-210	ENST00000567705	UTY	O14607	1347 aa		21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	PPEF1	O14829	653 aa	Predicted RBP	21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	UBE3B	Q7Z3V4	1068 aa		21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	RTKN2	Q8IZC4	609 aa		21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	TTLL11	Q8NHH1	800 aa		21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	PSMD1	Q99460	953 aa		21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	RNF181	Q9P0P0	153 aa		21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	ZNF219	Q9P2Y4	722 aa	Predicted RBP	21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	TAF1	P21675	1872 aa		21.06	■□□□□ 0.96
INO80E-210	ENST00000567705	ZC3H4	Q9UPT8	1303 aa	Known RBP	21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	KIF3C	O14782	793 aa		21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	CSF1R	P07333	972 aa		21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	FKBP4	Q02790	459 aa	Known RBP eCLIP	21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	GRIPAP1	Q4V328	841 aa		21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	DDX46	Q7L014	1031 aa	Known RBP	21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	SP8	Q8IXZ3	490 aa		21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	CELF1	Q92879	486 aa	Known RBP	21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	TAOK3	Q9H2K8	898 aa		21.05	■□□□□ 0.96
INO80E-210	ENST00000567705	CTSW	P56202	376 aa		21.04	■□□□□ 0.96
INO80E-210	ENST00000567705	ARHGAP45	Q92619	1136 aa		21.04	■□□□□ 0.96
INO80E-210	ENST00000567705	RTFDC1	Q9BY42	306 aa	Predicted RBP	21.04	■□□□□ 0.96
INO80E-210	ENST00000567705	SRCIN1	Q9C0H9	1055 aa		21.04	■□□□□ 0.96
INO80E-210	ENST00000567705	NOB1	Q9ULX3	412 aa	Known RBP	21.04	■□□□□ 0.96
INO80E-210	ENST00000567705	LTBP1	Q14766	1721 aa		21.04	■□□□□ 0.96
INO80E-210	ENST00000567705	DUOX1	Q9NRD9	1551 aa		21.03	■□□□□ 0.96
INO80E-210	ENST00000567705	TMC4	Q7Z404	712 aa		21.03	■□□□□ 0.96
INO80E-210	ENST00000567705	DICER1	Q9UPY3	1922 aa	Known RBP	21.03	■□□□□ 0.96
INO80E-210	ENST00000567705	MYH3	P11055	1940 aa		21.02	■□□□□ 0.96
INO80E-210	ENST00000567705	GRM8	O00222	908 aa		21.02	■□□□□ 0.96
INO80E-210	ENST00000567705	FOXO4	P98177	505 aa		21.02	■□□□□ 0.96
INO80E-210	ENST00000567705	CCDC152	Q4G0S7	254 aa		21.02	■□□□□ 0.96
INO80E-210	ENST00000567705	KAZALD1	Q96I82	304 aa		21.02	■□□□□ 0.96
INO80E-210	ENST00000567705	SEC31B	Q9NQW1	1179 aa		21.02	■□□□□ 0.96
INO80E-210	ENST00000567705	COL4A5	P29400	1685 aa		21.01	■□□□□ 0.95
INO80E-210	ENST00000567705	BCAR3	O75815	825 aa		21	■□□□□ 0.95
INO80E-210	ENST00000567705	RPS8	P62241	208 aa	Known RBP	21	■□□□□ 0.95
INO80E-210	ENST00000567705	SLC4A10	Q6U841	1118 aa		21	■□□□□ 0.95
INO80E-210	ENST00000567705	GREM2	Q9H772	168 aa		21	■□□□□ 0.95
INO80E-210	ENST00000567705	TIAM2	Q8IVF5	1701 aa		21	■□□□□ 0.95
INO80E-210	ENST00000567705	CCDC88A	Q3V6T2	1871 aa		21	■□□□□ 0.95
INO80E-210	ENST00000567705	KIF16B	Q96L93	1317 aa		21	■□□□□ 0.95
INO80E-210	ENST00000567705	NBPF7	P0C2Y1	421 aa	Predicted RBP	20.99	■□□□□ 0.95
INO80E-210	ENST00000567705	EPHA10	Q5JZY3	1008 aa		20.99	■□□□□ 0.95
INO80E-210	ENST00000567705	USP44	Q9H0E7	712 aa		20.99	■□□□□ 0.95
INO80E-210	ENST00000567705	NMRK2	Q9NPI5	230 aa		20.99	■□□□□ 0.95
INO80E-210	ENST00000567705	KDM2B	Q8NHM5	1336 aa		20.99	■□□□□ 0.95
INO80E-210	ENST00000567705	API5	Q9BZZ5	524 aa	Known RBP	20.97	■□□□□ 0.95
INO80E-210	ENST00000567705	VPS33B	Q9H267	617 aa		20.97	■□□□□ 0.95
INO80E-210	ENST00000567705	ZNF277	Q9NRM2	450 aa	Predicted RBP	20.97	■□□□□ 0.95
INO80E-210	ENST00000567705	PODXL2	Q9NZ53	605 aa		20.97	■□□□□ 0.95
INO80E-210	ENST00000567705	IARS	P41252	1262 aa	Known RBP	20.96	■□□□□ 0.95
INO80E-210	ENST00000567705	RABL6	Q3YEC7	729 aa	Predicted RBP	20.96	■□□□□ 0.95
INO80E-210	ENST00000567705	TOMM70	O94826	608 aa		20.95	■□□□□ 0.94
INO80E-210	ENST00000567705	TRIM27	P14373	513 aa		20.95	■□□□□ 0.94
INO80E-210	ENST00000567705	CCT4	P50991	539 aa	Known RBP	20.95	■□□□□ 0.94
INO80E-210	ENST00000567705	INTS3	Q68E01	1043 aa	Known RBP	20.95	■□□□□ 0.94
INO80E-210	ENST00000567705	SUCLG2	Q96I99	432 aa		20.95	■□□□□ 0.94
INO80E-210	ENST00000567705	CCDC85A	Q96PX6	553 aa	Predicted RBP	20.95	■□□□□ 0.94
INO80E-210	ENST00000567705	C9orf78	Q9NZ63	289 aa	Predicted RBP	20.95	■□□□□ 0.94
INO80E-210	ENST00000567705	FZD9	O00144	591 aa		20.94	■□□□□ 0.94
INO80E-210	ENST00000567705	FAM161A	Q3B820	660 aa		20.94	■□□□□ 0.94
INO80E-210	ENST00000567705	ATF7IP	Q6VMQ6	1270 aa		20.94	■□□□□ 0.94
INO80E-210	ENST00000567705	MPND	Q8N594	471 aa		20.94	■□□□□ 0.94
INO80E-210	ENST00000567705	BSDC1	Q9NW68	430 aa	Predicted RBP	20.94	■□□□□ 0.94
INO80E-210	ENST00000567705	GLTPD2	A6NH11	291 aa		20.93	■□□□□ 0.94
INO80E-210	ENST00000567705	HSPA6	P17066	643 aa		20.93	■□□□□ 0.94
INO80E-210	ENST00000567705	ITGA6	P23229	1130 aa		20.93	■□□□□ 0.94
INO80E-210	ENST00000567705	GPSM2	P81274	684 aa		20.93	■□□□□ 0.94
INO80E-210	ENST00000567705	CDC5L	Q99459	802 aa	Known RBP	20.93	■□□□□ 0.94
INO80E-210	ENST00000567705	TNN	Q9UQP3	1299 aa		20.93	■□□□□ 0.94
INO80E-210	ENST00000567705	LMBR1L	Q6UX01	489 aa		20.92	■□□□□ 0.94
INO80E-210	ENST00000567705	DPP8	Q6V1X1	898 aa	Predicted RBP	20.92	■□□□□ 0.94
INO80E-210	ENST00000567705	ANKRD18A	Q8IVF6	992 aa		20.92	■□□□□ 0.94
INO80E-210	ENST00000567705	ANKRD44	Q8N8A2	993 aa		20.92	■□□□□ 0.94
INO80E-210	ENST00000567705	POLL	Q9UGP5	575 aa		20.92	■□□□□ 0.94
INO80E-210	ENST00000567705	KIAA2012	Q0VF49	1180 aa		20.91	■□□□□ 0.94
INO80E-210	ENST00000567705	RRAGC	Q9HB90	399 aa		20.91	■□□□□ 0.94
INO80E-210	ENST00000567705	WDR90	Q96KV7	1748 aa		20.9	■□□□□ 0.94
INO80E-210	ENST00000567705	POTEC	B2RU33	542 aa		20.9	■□□□□ 0.94
INO80E-210	ENST00000567705	IPO8	O15397	1037 aa	Known RBP	20.9	■□□□□ 0.94
INO80E-210	ENST00000567705	C16orf71	Q8IYS4	520 aa	Predicted RBP	20.9	■□□□□ 0.94
INO80E-210	ENST00000567705	SUPT20H	Q8NEM7	779 aa		20.9	■□□□□ 0.94
INO80E-210	ENST00000567705	RBM46	Q8TBY0	533 aa	Known RBP	20.9	■□□□□ 0.94
INO80E-210	ENST00000567705	MINPP1	Q9UNW1	487 aa		20.9	■□□□□ 0.94
INO80E-210	ENST00000567705	TBC1D16	Q8TBP0	767 aa		20.89	■□□□□ 0.93
INO80E-210	ENST00000567705	TMX4	Q9H1E5	349 aa	Predicted RBP	20.89	■□□□□ 0.93
INO80E-210	ENST00000567705	BICC1	Q9H694	974 aa	Known RBP	20.89	■□□□□ 0.93
INO80E-210	ENST00000567705	AOC3	Q16853	763 aa		20.88	■□□□□ 0.93
INO80E-210	ENST00000567705	NSFL1C	Q9UNZ2	370 aa	Known RBP	20.88	■□□□□ 0.93
INO80E-210	ENST00000567705	ZNF541	Q9H0D2	1346 aa		20.87	■□□□□ 0.93
INO80E-210	ENST00000567705	ANKRD18B	A2A2Z9	1011 aa		20.87	■□□□□ 0.93
INO80E-210	ENST00000567705	ZKSCAN2	Q63HK3	967 aa		20.87	■□□□□ 0.93

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms