RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 TRIM28Q13263 835 aaKnown RBP19.48■□□□□ 0.71
SCAMP2-209ENST00000567638 DPP8Q6V1X1 898 aaPredicted RBP19.48■□□□□ 0.71
SCAMP2-209ENST00000567638 TMC4Q7Z404 712 aa19.48■□□□□ 0.71
SCAMP2-209ENST00000567638 C8orf58Q8NAV2 365 aa19.48■□□□□ 0.71
SCAMP2-209ENST00000567638 CLEC11AQ9Y240 323 aa19.48■□□□□ 0.71
SCAMP2-209ENST00000567638 ITGBL1O95965 494 aaPredicted RBP19.47■□□□□ 0.71
SCAMP2-209ENST00000567638 LMOD1P29536 600 aaPredicted RBP19.47■□□□□ 0.71
SCAMP2-209ENST00000567638 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
SCAMP2-209ENST00000567638 RIC3Q7Z5B4 369 aa19.47■□□□□ 0.71
SCAMP2-209ENST00000567638 MPNDQ8N594 471 aa19.47■□□□□ 0.71
SCAMP2-209ENST00000567638 TRPM7Q96QT4 1865 aa19.46■□□□□ 0.71
SCAMP2-209ENST00000567638 SCNN1DP51172 638 aa19.46■□□□□ 0.71
SCAMP2-209ENST00000567638 MYH3P11055 1940 aa19.46■□□□□ 0.71
SCAMP2-209ENST00000567638 CACNA1FO60840 1977 aa19.46■□□□□ 0.71
SCAMP2-209ENST00000567638 KIAA2012Q0VF49 1180 aa19.45■□□□□ 0.7
SCAMP2-209ENST00000567638 CCDC27Q2M243 656 aa19.45■□□□□ 0.7
SCAMP2-209ENST00000567638 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
SCAMP2-209ENST00000567638 CHMP4AQ9BY43 222 aa19.45■□□□□ 0.7
SCAMP2-209ENST00000567638 ZNRF3Q9ULT6 936 aa19.45■□□□□ 0.7
SCAMP2-209ENST00000567638 IRS4O14654 1257 aaPredicted RBP19.44■□□□□ 0.7
SCAMP2-209ENST00000567638 EPS15P42566 896 aa19.44■□□□□ 0.7
SCAMP2-209ENST00000567638 CCDC30Q5VVM6 783 aa19.44■□□□□ 0.7
SCAMP2-209ENST00000567638 MAP1SQ66K74 1059 aaPredicted RBP19.44■□□□□ 0.7
SCAMP2-209ENST00000567638 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
SCAMP2-209ENST00000567638 ZBTB38Q8NAP3 1195 aaPredicted RBP19.43■□□□□ 0.7
SCAMP2-209ENST00000567638 CELF1Q92879 486 aaKnown RBP19.43■□□□□ 0.7
SCAMP2-209ENST00000567638 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
SCAMP2-209ENST00000567638 MYD88Q99836 296 aa19.43■□□□□ 0.7
SCAMP2-209ENST00000567638 MKRN1Q9UHC7 482 aaKnown RBP19.43■□□□□ 0.7
SCAMP2-209ENST00000567638 CNTNAP1P78357 1384 aa19.43■□□□□ 0.7
SCAMP2-209ENST00000567638 TMEM88BA6NKF7 163 aa19.42■□□□□ 0.7
SCAMP2-209ENST00000567638 CXCL9Q07325 125 aa19.42■□□□□ 0.7
SCAMP2-209ENST00000567638 WWC1Q8IX03 1113 aa19.42■□□□□ 0.7
SCAMP2-209ENST00000567638 CNTROBQ8N137 903 aa19.42■□□□□ 0.7
SCAMP2-209ENST00000567638 DDX58O95786 925 aaKnown RBP19.41■□□□□ 0.7
SCAMP2-209ENST00000567638 USP50Q70EL3 339 aaPredicted RBP19.41■□□□□ 0.7
SCAMP2-209ENST00000567638 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
SCAMP2-209ENST00000567638 MRS2Q9HD23 443 aa19.41■□□□□ 0.7
SCAMP2-209ENST00000567638 GPRC5DQ9NZD1 345 aa19.41■□□□□ 0.7
SCAMP2-209ENST00000567638 SPEF2Q9C093 1822 aa19.41■□□□□ 0.7
SCAMP2-209ENST00000567638 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
SCAMP2-209ENST00000567638 PCCAP05165 728 aaPredicted RBP19.4■□□□□ 0.7
SCAMP2-209ENST00000567638 HSPA1AP0DMV8 641 aaKnown RBP19.4■□□□□ 0.7
SCAMP2-209ENST00000567638 HSPA1BP0DMV9 641 aaKnown RBP19.4■□□□□ 0.7
SCAMP2-209ENST00000567638 HSP90B1P14625 803 aaKnown RBP19.4■□□□□ 0.7
SCAMP2-209ENST00000567638 METTL22Q9BUU2 404 aaPredicted RBP19.4■□□□□ 0.7
SCAMP2-209ENST00000567638 ANP32CO43423 234 aa19.39■□□□□ 0.69
SCAMP2-209ENST00000567638 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
SCAMP2-209ENST00000567638 CIAPIN1Q6FI81 312 aa19.39■□□□□ 0.69
SCAMP2-209ENST00000567638 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
SCAMP2-209ENST00000567638 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
SCAMP2-209ENST00000567638 IL16Q14005 1332 aa19.39■□□□□ 0.69
SCAMP2-209ENST00000567638 CDHR2Q9BYE9 1310 aa19.39■□□□□ 0.69
SCAMP2-209ENST00000567638 GMPSP49915 693 aaPredicted RBP19.38■□□□□ 0.69
SCAMP2-209ENST00000567638 PSME4Q14997 1843 aa19.38■□□□□ 0.69
SCAMP2-209ENST00000567638 TNIP1Q15025 636 aa19.38■□□□□ 0.69
SCAMP2-209ENST00000567638 STK31Q9BXU1 1019 aa19.38■□□□□ 0.69
SCAMP2-209ENST00000567638 ADARB2Q9NS39 739 aaKnown RBP19.38■□□□□ 0.69
SCAMP2-209ENST00000567638 MAP3K2Q9Y2U5 619 aa19.38■□□□□ 0.69
SCAMP2-209ENST00000567638 YDJCA8MPS7 323 aa19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 RAD17O75943 681 aa19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 RPS8P62241 208 aaKnown RBP19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 GPSM2P81274 684 aa19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 TWISTNBQ3B726 338 aaPredicted RBP19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 PCNTO95613 3336 aa19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 SCN9AQ15858 1988 aa19.37■□□□□ 0.69
SCAMP2-209ENST00000567638 PDE8AO60658 829 aa19.36■□□□□ 0.69
SCAMP2-209ENST00000567638 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
SCAMP2-209ENST00000567638 COL13A1Q5TAT6 717 aaPredicted RBP19.36■□□□□ 0.69
SCAMP2-209ENST00000567638 SEC31BQ9NQW1 1179 aa19.36■□□□□ 0.69
SCAMP2-209ENST00000567638 POLLQ9UGP5 575 aa19.36■□□□□ 0.69
SCAMP2-209ENST00000567638 PI4KAP2A4QPH2 592 aa19.35■□□□□ 0.69
SCAMP2-209ENST00000567638 C6orf229H3BNL8 230 aa19.35■□□□□ 0.69
SCAMP2-209ENST00000567638 CCDC152Q4G0S7 254 aa19.35■□□□□ 0.69
SCAMP2-209ENST00000567638 PI4KAP1Q8N8J0 262 aa19.35■□□□□ 0.69
SCAMP2-209ENST00000567638 JARID2Q92833 1246 aaPredicted RBP19.35■□□□□ 0.69
SCAMP2-209ENST00000567638 BCL2L13Q9BXK5 485 aa19.35■□□□□ 0.69
SCAMP2-209ENST00000567638 THSD7BQ9C0I4 1608 aa19.34■□□□□ 0.69
SCAMP2-209ENST00000567638 EYA3Q99504 573 aa19.34■□□□□ 0.69
SCAMP2-209ENST00000567638 DBNDD1Q9H9R9 158 aa19.34■□□□□ 0.69
SCAMP2-209ENST00000567638 FANCIQ9NVI1 1328 aa19.33■□□□□ 0.69
SCAMP2-209ENST00000567638 RASSF10A6NK89 507 aa19.33■□□□□ 0.68
SCAMP2-209ENST00000567638 RIMBP2O15034 1052 aa19.33■□□□□ 0.68
SCAMP2-209ENST00000567638 IGKV5-2P06315 115 aa19.33■□□□□ 0.68
SCAMP2-209ENST00000567638 VEGFBP49765 207 aa19.33■□□□□ 0.68
SCAMP2-209ENST00000567638 NEXNQ0ZGT2 675 aa19.33■□□□□ 0.68
SCAMP2-209ENST00000567638 TBC1D16Q8TBP0 767 aa19.33■□□□□ 0.68
SCAMP2-209ENST00000567638 PODXL2Q9NZ53 605 aa19.33■□□□□ 0.68
SCAMP2-209ENST00000567638 FMR1Q06787 632 aaKnown RBP eCLIP19.32■□□□□ 0.68
SCAMP2-209ENST00000567638 G2E3Q7L622 706 aa19.32■□□□□ 0.68
SCAMP2-209ENST00000567638 CCDC85AQ96PX6 553 aaPredicted RBP19.32■□□□□ 0.68
SCAMP2-209ENST00000567638 ABT1Q9ULW3 272 aaKnown RBP19.32■□□□□ 0.68
SCAMP2-209ENST00000567638 POLR2AP24928 1970 aaKnown RBP19.32■□□□□ 0.68
SCAMP2-209ENST00000567638 TRAF5O00463 557 aa19.31■□□□□ 0.68
SCAMP2-209ENST00000567638 ECE2O60344 883 aa19.31■□□□□ 0.68
SCAMP2-209ENST00000567638 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
SCAMP2-209ENST00000567638 DEFB115Q30KQ5 88 aa19.31■□□□□ 0.68
SCAMP2-209ENST00000567638 WDR63Q8IWG1 891 aa19.31■□□□□ 0.68
SCAMP2-209ENST00000567638 GPR101Q96P66 508 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms