RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SAMD1Q6SPF0 538 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-209ENST00000567635 KSR2Q6VAB6 950 aa8.89□□□□□ -0.99
SF3B3-209ENST00000567635 ZBTB38Q8NAP3 1195 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-209ENST00000567635 CCDC191Q8NCU4 936 aa8.89□□□□□ -0.99
SF3B3-209ENST00000567635 MYD88Q99836 296 aa8.89□□□□□ -0.99
SF3B3-209ENST00000567635 METTL22Q9BUU2 404 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-209ENST00000567635 VPS33BQ9H267 617 aa8.89□□□□□ -0.99
SF3B3-209ENST00000567635 MYH3P11055 1940 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 PI4KAP2A4QPH2 592 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 IRS4O14654 1257 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-209ENST00000567635 GRAPQ13588 217 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 TMC4Q7Z404 712 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 LARGE2Q8N3Y3 721 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 MPNDQ8N594 471 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 PI4KAP1Q8N8J0 262 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 SUPT20HQ8NEM7 779 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 GRAPLQ8TC17 118 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-209ENST00000567635 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-209ENST00000567635 CWC25Q9NXE8 425 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-209ENST00000567635 MAP3K2Q9Y2U5 619 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 SNED1Q8TER0 1413 aa8.88□□□□□ -0.99
SF3B3-209ENST00000567635 IQCA1LA6NCM1 817 aa8.87□□□□□ -0.99
SF3B3-209ENST00000567635 VAMP4O75379 141 aa8.87□□□□□ -0.99
SF3B3-209ENST00000567635 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-209ENST00000567635 EIF6P56537 245 aaKnown RBP8.87□□□□□ -0.99
SF3B3-209ENST00000567635 RPS8P62241 208 aaKnown RBP8.87□□□□□ -0.99
SF3B3-209ENST00000567635 NEXNQ0ZGT2 675 aa8.87□□□□□ -0.99
SF3B3-209ENST00000567635 DPP8Q6V1X1 898 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-209ENST00000567635 GPC2Q8N158 579 aa8.87□□□□□ -0.99
SF3B3-209ENST00000567635 RTFDC1Q9BY42 306 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-209ENST00000567635 MYH16Q9H6N6 1097 aa8.87□□□□□ -0.99
SF3B3-209ENST00000567635 POLR2AP24928 1970 aaKnown RBP8.86□□□□□ -0.99
SF3B3-209ENST00000567635 ZNF541Q9H0D2 1346 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 ZBTB22O15209 634 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 PPIP5K2O43314 1243 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 PDE8AO60658 829 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 EXOSC9Q06265 439 aaKnown RBP8.86□□□□□ -0.99
SF3B3-209ENST00000567635 AOC3Q16853 763 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 IFFO2Q5TF58 517 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 G2E3Q7L622 706 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 SLC51AQ86UW1 340 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 NIM1KQ8IY84 436 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 DNAJC5GQ8N7S2 189 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
SF3B3-209ENST00000567635 HACL1Q9UJ83 578 aa8.86□□□□□ -0.99
SF3B3-209ENST00000567635 IGKV5-2P06315 115 aa8.85□□□□□ -0.99
SF3B3-209ENST00000567635 FLIIQ13045 1269 aa8.85□□□□□ -0.99
SF3B3-209ENST00000567635 CCDC152Q4G0S7 254 aa8.85□□□□□ -0.99
SF3B3-209ENST00000567635 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
SF3B3-209ENST00000567635 CELF1Q92879 486 aaKnown RBP8.85□□□□□ -0.99
SF3B3-209ENST00000567635 TAF1DQ9H5J8 278 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-209ENST00000567635 SPINK5Q9NQ38 1064 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-209ENST00000567635 ZNRF3Q9ULT6 936 aa8.85□□□□□ -0.99
SF3B3-209ENST00000567635 GJA3Q9Y6H8 435 aa8.85□□□□□ -0.99
SF3B3-209ENST00000567635 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
SF3B3-209ENST00000567635 EPHX2P34913 555 aa8.84□□□□□ -0.99
SF3B3-209ENST00000567635 KIAA2012Q0VF49 1180 aa8.84□□□□□ -0.99
SF3B3-209ENST00000567635 PNMA8AQ86V59 439 aaPredicted RBP8.84□□□□□ -0.99
SF3B3-209ENST00000567635 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
SF3B3-209ENST00000567635 NSFL1CQ9UNZ2 370 aaKnown RBP8.84□□□□□ -0.99
SF3B3-209ENST00000567635 CLEC11AQ9Y240 323 aa8.84□□□□□ -0.99
SF3B3-209ENST00000567635 COL4A5P29400 1685 aa8.84□□□□□ -0.99
SF3B3-209ENST00000567635 CDHR2Q9BYE9 1310 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 C6orf229H3BNL8 230 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 H7C1W4 665 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 POTEIP0CG38 1075 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 POTEJP0CG39 1038 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 LMOD1P29536 600 aaPredicted RBP8.83□□□□□ -1
SF3B3-209ENST00000567635 GPSM2P81274 684 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 HTRA3P83110 453 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 CXCL9Q07325 125 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 FKBP5Q13451 457 aaPredicted RBP8.83□□□□□ -1
SF3B3-209ENST00000567635 TNIP1Q15025 636 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 WASHC4Q2M389 1173 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 CWF19L2Q2TBE0 894 aaKnown RBP8.83□□□□□ -1
SF3B3-209ENST00000567635 EAPPQ56P03 285 aaPredicted RBP8.83□□□□□ -1
SF3B3-209ENST00000567635 DNAAF4Q8WXU2 420 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 SEC31BQ9NQW1 1179 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 LRRC37AA6NMS7 1700 aa8.83□□□□□ -1
SF3B3-209ENST00000567635 EPS15P42566 896 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 CTSWP56202 376 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 GCKRQ14397 625 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 UBE3BQ7Z3V4 1068 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 ANKRD18AQ8IVF6 992 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 LINS1Q8NG48 757 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 TTLL11Q8NHH1 800 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
SF3B3-209ENST00000567635 POLLQ9UGP5 575 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 SPEF2Q9C093 1822 aa8.82□□□□□ -1
SF3B3-209ENST00000567635 ZNF521Q96K83 1311 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 TRPM7Q96QT4 1865 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 CCER2I3L3R5 266 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 RIMBP2O15034 1052 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 RAD17O75943 681 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 ITGBL1O95965 494 aaPredicted RBP8.81□□□□□ -1
SF3B3-209ENST00000567635 CIAPIN1Q6FI81 312 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 TBC1D16Q8TBP0 767 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 KLRG1Q96E93 195 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms