RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 FNBP4Q8N3X1 1017 aaPredicted RBP21.3■■□□□ 1
CMTM3-214ENST00000567572 NGLY1Q96IV0 654 aa21.3■■□□□ 1
CMTM3-214ENST00000567572 SIL1Q9H173 461 aa21.3■■□□□ 1
CMTM3-214ENST00000567572 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
CMTM3-214ENST00000567572 SPATA31A6Q5VVP1 1343 aa21.3■■□□□ 1
CMTM3-214ENST00000567572 MAP3K15Q6ZN16 1313 aa21.3■■□□□ 1
CMTM3-214ENST00000567572 AACSQ86V21 672 aa21.29■■□□□ 1
CMTM3-214ENST00000567572 SYAP1Q96A49 352 aaPredicted RBP21.29■■□□□ 1
CMTM3-214ENST00000567572 SNRKQ9NRH2 765 aa21.29■■□□□ 1
CMTM3-214ENST00000567572 ZBTB1Q9Y2K1 713 aa21.29■■□□□ 1
CMTM3-214ENST00000567572 RREB1Q92766 1687 aa21.29■■□□□ 1
CMTM3-214ENST00000567572 NCLP19338 710 aaKnown RBP21.29■■□□□ 1
CMTM3-214ENST00000567572 LMBR1LQ6UX01 489 aa21.29■■□□□ 1
CMTM3-214ENST00000567572 EAF2Q96CJ1 260 aaPredicted RBP21.29■■□□□ 1
CMTM3-214ENST00000567572 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.29■■□□□ 1
CMTM3-214ENST00000567572 ANKRD36CQ5JPF3 1778 aa21.29■■□□□ 1
CMTM3-214ENST00000567572 HS1BP3Q53T59 392 aa21.28■■□□□ 1
CMTM3-214ENST00000567572 ACSBG1Q96GR2 724 aa21.28■■□□□ 1
CMTM3-214ENST00000567572 LIMCH1Q9UPQ0 1083 aa21.28■■□□□ 1
CMTM3-214ENST00000567572 FAM98CQ17RN3 349 aaKnown RBP21.27■■□□□ 1
CMTM3-214ENST00000567572 GIGYF2Q6Y7W6 1299 aaKnown RBP21.27■■□□□ 1
CMTM3-214ENST00000567572 MAP4K4O95819 1239 aaPredicted RBP21.27■■□□□ 1
CMTM3-214ENST00000567572 PDIA4P13667 645 aaKnown RBP21.27■■□□□ 1
CMTM3-214ENST00000567572 LRSAM1Q6UWE0 723 aa21.27■■□□□ 1
CMTM3-214ENST00000567572 CWC27Q6UX04 472 aaKnown RBP21.27■■□□□ 1
CMTM3-214ENST00000567572 TMEM87AQ8NBN3 555 aa21.27■■□□□ 1
CMTM3-214ENST00000567572 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-214ENST00000567572 ZSCAN31Q96LW9 406 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-214ENST00000567572 VPS53Q5VIR6 699 aa21.25■□□□□ 0.99
CMTM3-214ENST00000567572 CERKQ8TCT0 537 aa21.25■□□□□ 0.99
CMTM3-214ENST00000567572 SH2B1Q9NRF2 756 aaPredicted RBP21.25■□□□□ 0.99
CMTM3-214ENST00000567572 THSD7AQ9UPZ6 1657 aa21.25■□□□□ 0.99
CMTM3-214ENST00000567572 PHF14O94880 888 aa21.24■□□□□ 0.99
CMTM3-214ENST00000567572 PCCAP05165 728 aaPredicted RBP21.24■□□□□ 0.99
CMTM3-214ENST00000567572 TLR7Q9NYK1 1049 aaKnown RBP21.24■□□□□ 0.99
CMTM3-214ENST00000567572 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
CMTM3-214ENST00000567572 RFX7Q2KHR2 1363 aa21.24■□□□□ 0.99
CMTM3-214ENST00000567572 PALLDQ8WX93 1383 aa21.24■□□□□ 0.99
CMTM3-214ENST00000567572 LOC102724428A0A0B4J2F2 783 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 AK2P54819 239 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 SIK1P57059 783 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 HLFQ16534 295 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 ATP6V1DQ9Y5K8 247 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 RPAP1Q9BWH6 1393 aaPredicted RBP21.23■□□□□ 0.99
CMTM3-214ENST00000567572 CCDC171Q6TFL3 1326 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 RASEFQ8IZ41 740 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 CCDC8Q9H0W5 538 aaPredicted RBP21.23■□□□□ 0.99
CMTM3-214ENST00000567572 ZSWIM6Q9HCJ5 1215 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 TMEM63CQ9P1W3 806 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 NUP98P52948 1817 aa21.23■□□□□ 0.99
CMTM3-214ENST00000567572 ERVV-1B6SEH8 477 aa21.22■□□□□ 0.99
CMTM3-214ENST00000567572 ZKSCAN1P17029 563 aaPredicted RBP21.22■□□□□ 0.99
CMTM3-214ENST00000567572 INTS5Q6P9B9 1019 aaKnown RBP21.22■□□□□ 0.99
CMTM3-214ENST00000567572 PLA2G12BQ9BX93 195 aa21.22■□□□□ 0.99
CMTM3-214ENST00000567572 A0A0G2JS52 829 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 ATP6V1AP38606 617 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 TFCP2Q12800 502 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 NOL8Q76FK4 1167 aaKnown RBP21.21■□□□□ 0.99
CMTM3-214ENST00000567572 ZBTB38Q8NAP3 1195 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-214ENST00000567572 PDLIM2Q96JY6 352 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 CCDC87Q9NVE4 849 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 COL5A3P25940 1745 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-214ENST00000567572 EIF5P55010 431 aaKnown RBP21.21■□□□□ 0.99
CMTM3-214ENST00000567572 RUFY3Q7L099 469 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 NLRP10Q86W26 655 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-214ENST00000567572 USP21Q9UK80 565 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 CHMP3Q9Y3E7 222 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 CYP46A1Q9Y6A2 500 aa21.21■□□□□ 0.99
CMTM3-214ENST00000567572 CDHR2Q9BYE9 1310 aa21.2■□□□□ 0.99
CMTM3-214ENST00000567572 KCNQ2O43526 872 aa21.2■□□□□ 0.98
CMTM3-214ENST00000567572 ITPK1Q13572 414 aa21.2■□□□□ 0.98
CMTM3-214ENST00000567572 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
CMTM3-214ENST00000567572 ATG9AQ7Z3C6 839 aa21.2■□□□□ 0.98
CMTM3-214ENST00000567572 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
CMTM3-214ENST00000567572 ZSCAN22P10073 491 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-214ENST00000567572 CASTP20810 708 aaKnown RBP21.19■□□□□ 0.98
CMTM3-214ENST00000567572 PSMA5P28066 241 aa21.19■□□□□ 0.98
CMTM3-214ENST00000567572 CRKLP46109 303 aaKnown RBP21.19■□□□□ 0.98
CMTM3-214ENST00000567572 ZSCAN30Q86W11 494 aa21.19■□□□□ 0.98
CMTM3-214ENST00000567572 RBSNQ9H1K0 784 aa21.19■□□□□ 0.98
CMTM3-214ENST00000567572 MAP4K1Q92918 833 aa21.19■□□□□ 0.98
CMTM3-214ENST00000567572 FAM89AQ96GI7 184 aa21.19■□□□□ 0.98
CMTM3-214ENST00000567572 SMC3Q9UQE7 1217 aa21.19■□□□□ 0.98
CMTM3-214ENST00000567572 CSPP1Q1MSJ5 1256 aa21.18■□□□□ 0.98
CMTM3-214ENST00000567572 RNF20Q5VTR2 975 aa21.18■□□□□ 0.98
CMTM3-214ENST00000567572 TICAM2Q86XR7 235 aa21.18■□□□□ 0.98
CMTM3-214ENST00000567572 PDRG1Q9NUG6 133 aa21.18■□□□□ 0.98
CMTM3-214ENST00000567572 RBM27Q9P2N5 1060 aaKnown RBP21.18■□□□□ 0.98
CMTM3-214ENST00000567572 DBNLQ9UJU6 430 aaKnown RBP21.18■□□□□ 0.98
CMTM3-214ENST00000567572 MYH14Q7Z406 1995 aaKnown RBP21.18■□□□□ 0.98
CMTM3-214ENST00000567572 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
CMTM3-214ENST00000567572 STX6O43752 255 aa21.17■□□□□ 0.98
CMTM3-214ENST00000567572 GPTP24298 496 aa21.17■□□□□ 0.98
CMTM3-214ENST00000567572 ALDH8A1Q9H2A2 487 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-214ENST00000567572 TBC1D2BQ9UPU7 963 aa21.17■□□□□ 0.98
CMTM3-214ENST00000567572 CIAO1O76071 339 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms