RNA–Protein interactions for RNA: ENST00000567223.6

SMPD3-209, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-209ENST00000567223 PCCAP05165 728 aaPredicted RBP23.98■■□□□ 1.43
SMPD3-209ENST00000567223 EIF6P56537 245 aaKnown RBP23.98■■□□□ 1.43
SMPD3-209ENST00000567223 CHADLQ6NUI6 762 aa23.98■■□□□ 1.43
SMPD3-209ENST00000567223 KSR2Q6VAB6 950 aa23.98■■□□□ 1.43
SMPD3-209ENST00000567223 HACL1Q9UJ83 578 aa23.98■■□□□ 1.43
SMPD3-209ENST00000567223 FANCIQ9NVI1 1328 aa23.98■■□□□ 1.43
SMPD3-209ENST00000567223 DUOX1Q9NRD9 1551 aa23.98■■□□□ 1.43
SMPD3-209ENST00000567223 DPP8Q6V1X1 898 aaPredicted RBP23.97■■□□□ 1.43
SMPD3-209ENST00000567223 PNMA8AQ86V59 439 aaPredicted RBP23.97■■□□□ 1.43
SMPD3-209ENST00000567223 MPNDQ8N594 471 aa23.97■■□□□ 1.43
SMPD3-209ENST00000567223 CWC25Q9NXE8 425 aaPredicted RBP23.97■■□□□ 1.43
SMPD3-209ENST00000567223 CACNA1FO60840 1977 aa23.96■■□□□ 1.43
SMPD3-209ENST00000567223 CDHR2Q9BYE9 1310 aa23.96■■□□□ 1.43
SMPD3-209ENST00000567223 KIAA2012Q0VF49 1180 aa23.96■■□□□ 1.43
SMPD3-209ENST00000567223 SLC51AQ86UW1 340 aa23.96■■□□□ 1.43
SMPD3-209ENST00000567223 NIM1KQ8IY84 436 aa23.96■■□□□ 1.43
SMPD3-209ENST00000567223 MYD88Q99836 296 aa23.96■■□□□ 1.43
SMPD3-209ENST00000567223 PPIP5K2O43314 1243 aa23.95■■□□□ 1.42
SMPD3-209ENST00000567223 KLRG1Q96E93 195 aa23.95■■□□□ 1.42
SMPD3-209ENST00000567223 LTBP1Q14766 1721 aa23.95■■□□□ 1.42
SMPD3-209ENST00000567223 PI4KAP2A4QPH2 592 aa23.94■■□□□ 1.42
SMPD3-209ENST00000567223 TCERG1O14776 1098 aaKnown RBP23.94■■□□□ 1.42
SMPD3-209ENST00000567223 EPHX2P34913 555 aa23.94■■□□□ 1.42
SMPD3-209ENST00000567223 PI4KAP1Q8N8J0 262 aa23.94■■□□□ 1.42
SMPD3-209ENST00000567223 JMYQ8N9B5 988 aa23.94■■□□□ 1.42
SMPD3-209ENST00000567223 MAP3K2Q9Y2U5 619 aa23.94■■□□□ 1.42
SMPD3-209ENST00000567223 PDE8AO60658 829 aa23.93■■□□□ 1.42
SMPD3-209ENST00000567223 AOC3Q16853 763 aa23.93■■□□□ 1.42
SMPD3-209ENST00000567223 CELF1Q92879 486 aaKnown RBP23.93■■□□□ 1.42
SMPD3-209ENST00000567223 ZNRF3Q9ULT6 936 aa23.93■■□□□ 1.42
SMPD3-209ENST00000567223 TAF1P21675 1872 aa23.93■■□□□ 1.42
SMPD3-209ENST00000567223 PASKQ96RG2 1323 aa23.92■■□□□ 1.42
SMPD3-209ENST00000567223 SLC4A2P04920 1241 aa23.92■■□□□ 1.42
SMPD3-209ENST00000567223 IGKV5-2P06315 115 aa23.92■■□□□ 1.42
SMPD3-209ENST00000567223 POTEIP0CG38 1075 aa23.92■■□□□ 1.42
SMPD3-209ENST00000567223 POTEJP0CG39 1038 aa23.92■■□□□ 1.42
SMPD3-209ENST00000567223 VAMP4O75379 141 aa23.91■■□□□ 1.42
SMPD3-209ENST00000567223 SCNN1DP51172 638 aa23.91■■□□□ 1.42
SMPD3-209ENST00000567223 NEXNQ0ZGT2 675 aa23.91■■□□□ 1.42
SMPD3-209ENST00000567223 CCDC152Q4G0S7 254 aa23.91■■□□□ 1.42
SMPD3-209ENST00000567223 PCNTO95613 3336 aa23.91■■□□□ 1.42
SMPD3-209ENST00000567223 COL4A1P02462 1669 aa23.9■■□□□ 1.42
SMPD3-209ENST00000567223 RPS8P62241 208 aaKnown RBP23.9■■□□□ 1.42
SMPD3-209ENST00000567223 ZNF521Q96K83 1311 aa23.89■■□□□ 1.42
SMPD3-209ENST00000567223 FLIIQ13045 1269 aa23.89■■□□□ 1.41
SMPD3-209ENST00000567223 RTL5Q5HYW3 569 aaPredicted RBP23.89■■□□□ 1.41
SMPD3-209ENST00000567223 MYH16Q9H6N6 1097 aa23.89■■□□□ 1.41
SMPD3-209ENST00000567223 CREBZFQ9NS37 354 aa23.89■■□□□ 1.41
SMPD3-209ENST00000567223 PODXL2Q9NZ53 605 aa23.89■■□□□ 1.41
SMPD3-209ENST00000567223 RTL9Q8NET4 1388 aa23.89■■□□□ 1.41
SMPD3-209ENST00000567223 NEURL1BA8MQ27 555 aa23.88■■□□□ 1.41
SMPD3-209ENST00000567223 ITGBL1O95965 494 aaPredicted RBP23.88■■□□□ 1.41
SMPD3-209ENST00000567223 LMOD1P29536 600 aaPredicted RBP23.88■■□□□ 1.41
SMPD3-209ENST00000567223 FAM9BQ8IZU0 186 aa23.88■■□□□ 1.41
SMPD3-209ENST00000567223 HTRA3P83110 453 aa23.87■■□□□ 1.41
SMPD3-209ENST00000567223 CXCL9Q07325 125 aa23.87■■□□□ 1.41
SMPD3-209ENST00000567223 USP50Q70EL3 339 aaPredicted RBP23.87■■□□□ 1.41
SMPD3-209ENST00000567223 G2E3Q7L622 706 aa23.87■■□□□ 1.41
SMPD3-209ENST00000567223 ZNF428Q96B54 188 aa23.87■■□□□ 1.41
SMPD3-209ENST00000567223 EXOSC9Q06265 439 aaKnown RBP23.86■■□□□ 1.41
SMPD3-209ENST00000567223 SPINK5Q9NQ38 1064 aaPredicted RBP23.86■■□□□ 1.41
SMPD3-209ENST00000567223 GJA3Q9Y6H8 435 aa23.86■■□□□ 1.41
SMPD3-209ENST00000567223 H7C1W4 665 aa23.85■■□□□ 1.41
SMPD3-209ENST00000567223 CTSWP56202 376 aa23.85■■□□□ 1.41
SMPD3-209ENST00000567223 TNIP1Q15025 636 aa23.85■■□□□ 1.41
SMPD3-209ENST00000567223 WASHC4Q2M389 1173 aa23.85■■□□□ 1.41
SMPD3-209ENST00000567223 GPRC5DQ9NZD1 345 aa23.85■■□□□ 1.41
SMPD3-209ENST00000567223 NSFL1CQ9UNZ2 370 aaKnown RBP23.85■■□□□ 1.41
SMPD3-209ENST00000567223 MYH3P11055 1940 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 GPSM2P81274 684 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 EAPPQ56P03 285 aaPredicted RBP23.84■■□□□ 1.41
SMPD3-209ENST00000567223 CIAPIN1Q6FI81 312 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 LINS1Q8NG48 757 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 EYA3Q99504 573 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 PLA2G12BQ9BX93 195 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 SEC31BQ9NQW1 1179 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 POLLQ9UGP5 575 aa23.84■■□□□ 1.41
SMPD3-209ENST00000567223 FKBP5Q13451 457 aaPredicted RBP23.83■■□□□ 1.41
SMPD3-209ENST00000567223 GCKRQ14397 625 aa23.83■■□□□ 1.41
SMPD3-209ENST00000567223 CWF19L2Q2TBE0 894 aaKnown RBP23.83■■□□□ 1.41
SMPD3-209ENST00000567223 TTLL11Q8NHH1 800 aa23.83■■□□□ 1.41
SMPD3-209ENST00000567223 TBC1D16Q8TBP0 767 aa23.83■■□□□ 1.41
SMPD3-209ENST00000567223 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
SMPD3-209ENST00000567223 SALL2Q9Y467 1007 aaPredicted RBP23.83■■□□□ 1.41
SMPD3-209ENST00000567223 YDJCA8MPS7 323 aa23.82■■□□□ 1.4
SMPD3-209ENST00000567223 EPS15P42566 896 aa23.82■■□□□ 1.4
SMPD3-209ENST00000567223 CDC5LQ99459 802 aaKnown RBP23.82■■□□□ 1.4
SMPD3-209ENST00000567223 ADARB2Q9NS39 739 aaKnown RBP23.82■■□□□ 1.4
SMPD3-209ENST00000567223 CNTROBQ8N137 903 aa23.81■■□□□ 1.4
SMPD3-209ENST00000567223 ZNF609O15014 1411 aa23.8■■□□□ 1.4
SMPD3-209ENST00000567223 CASP7P55210 303 aa23.8■■□□□ 1.4
SMPD3-209ENST00000567223 ANKRD18AQ8IVF6 992 aa23.8■■□□□ 1.4
SMPD3-209ENST00000567223 DPF2Q92785 391 aa23.8■■□□□ 1.4
SMPD3-209ENST00000567223 CLEC11AQ9Y240 323 aa23.8■■□□□ 1.4
SMPD3-209ENST00000567223 BSDC1Q9NW68 430 aaPredicted RBP23.79■■□□□ 1.4
SMPD3-209ENST00000567223 PGAP2Q9UHJ9 254 aa23.79■■□□□ 1.4
SMPD3-209ENST00000567223 TMEM88BA6NKF7 163 aa23.78■■□□□ 1.4
SMPD3-209ENST00000567223 C6orf229H3BNL8 230 aa23.78■■□□□ 1.4
SMPD3-209ENST00000567223 GMPSP49915 693 aaPredicted RBP23.78■■□□□ 1.4
SMPD3-209ENST00000567223 ZC3H15Q8WU90 426 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms