RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ITGBL1O95965 494 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-216ENST00000567023 AOC3Q16853 763 aa18.4■□□□□ 0.54
COMMD4-216ENST00000567023 DPP8Q6V1X1 898 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-216ENST00000567023 NIM1KQ8IY84 436 aa18.4■□□□□ 0.54
COMMD4-216ENST00000567023 MPNDQ8N594 471 aa18.4■□□□□ 0.54
COMMD4-216ENST00000567023 TSPYL6Q8N831 410 aa18.4■□□□□ 0.54
COMMD4-216ENST00000567023 ZBTB38Q8NAP3 1195 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-216ENST00000567023 ADAMTSL1Q8N6G6 1762 aa18.4■□□□□ 0.54
COMMD4-216ENST00000567023 ANP32CO43423 234 aa18.39■□□□□ 0.53
COMMD4-216ENST00000567023 SCNN1DP51172 638 aa18.39■□□□□ 0.53
COMMD4-216ENST00000567023 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.53
COMMD4-216ENST00000567023 ZNF428Q96B54 188 aa18.39■□□□□ 0.53
COMMD4-216ENST00000567023 IL16Q14005 1332 aa18.39■□□□□ 0.53
COMMD4-216ENST00000567023 IRS4O14654 1257 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-216ENST00000567023 KIAA2012Q0VF49 1180 aa18.38■□□□□ 0.53
COMMD4-216ENST00000567023 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-216ENST00000567023 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
COMMD4-216ENST00000567023 ZNRF3Q9ULT6 936 aa18.38■□□□□ 0.53
COMMD4-216ENST00000567023 GJA3Q9Y6H8 435 aa18.38■□□□□ 0.53
COMMD4-216ENST00000567023 DDX58O95786 925 aaKnown RBP18.37■□□□□ 0.53
COMMD4-216ENST00000567023 HSP90B1P14625 803 aaKnown RBP18.37■□□□□ 0.53
COMMD4-216ENST00000567023 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
COMMD4-216ENST00000567023 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
COMMD4-216ENST00000567023 METTL22Q9BUU2 404 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-216ENST00000567023 TAF1P21675 1872 aa18.37■□□□□ 0.53
COMMD4-216ENST00000567023 LRRC37AA6NMS7 1700 aa18.36■□□□□ 0.53
COMMD4-216ENST00000567023 LMOD1P29536 600 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-216ENST00000567023 CXCL9Q07325 125 aa18.36■□□□□ 0.53
COMMD4-216ENST00000567023 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-216ENST00000567023 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
COMMD4-216ENST00000567023 MYD88Q99836 296 aa18.36■□□□□ 0.53
COMMD4-216ENST00000567023 LTBP1Q14766 1721 aa18.35■□□□□ 0.53
COMMD4-216ENST00000567023 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-216ENST00000567023 CNTROBQ8N137 903 aa18.35■□□□□ 0.53
COMMD4-216ENST00000567023 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
COMMD4-216ENST00000567023 EPS15P42566 896 aa18.34■□□□□ 0.53
COMMD4-216ENST00000567023 RPS8P62241 208 aaKnown RBP18.34■□□□□ 0.53
COMMD4-216ENST00000567023 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-216ENST00000567023 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
COMMD4-216ENST00000567023 USP50Q70EL3 339 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-216ENST00000567023 CWC25Q9NXE8 425 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-216ENST00000567023 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
COMMD4-216ENST00000567023 TMEM88BA6NKF7 163 aa18.33■□□□□ 0.52
COMMD4-216ENST00000567023 MAP1SQ66K74 1059 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-216ENST00000567023 WDR63Q8IWG1 891 aa18.33■□□□□ 0.52
COMMD4-216ENST00000567023 STK31Q9BXU1 1019 aa18.33■□□□□ 0.52
COMMD4-216ENST00000567023 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.52
COMMD4-216ENST00000567023 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
COMMD4-216ENST00000567023 PI4KAP2A4QPH2 592 aa18.32■□□□□ 0.52
COMMD4-216ENST00000567023 PDE8AO60658 829 aa18.32■□□□□ 0.52
COMMD4-216ENST00000567023 TNIP1Q15025 636 aa18.32■□□□□ 0.52
COMMD4-216ENST00000567023 PI4KAP1Q8N8J0 262 aa18.32■□□□□ 0.52
COMMD4-216ENST00000567023 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
COMMD4-216ENST00000567023 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
COMMD4-216ENST00000567023 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
COMMD4-216ENST00000567023 CIAPIN1Q6FI81 312 aa18.31■□□□□ 0.52
COMMD4-216ENST00000567023 ADARB2Q9NS39 739 aaKnown RBP18.31■□□□□ 0.52
COMMD4-216ENST00000567023 POLLQ9UGP5 575 aa18.31■□□□□ 0.52
COMMD4-216ENST00000567023 COL4A1P02462 1669 aa18.31■□□□□ 0.52
COMMD4-216ENST00000567023 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
COMMD4-216ENST00000567023 YDJCA8MPS7 323 aa18.3■□□□□ 0.52
COMMD4-216ENST00000567023 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
COMMD4-216ENST00000567023 IGKV5-2P06315 115 aa18.3■□□□□ 0.52
COMMD4-216ENST00000567023 GPSM2P81274 684 aa18.3■□□□□ 0.52
COMMD4-216ENST00000567023 CCDC152Q4G0S7 254 aa18.3■□□□□ 0.52
COMMD4-216ENST00000567023 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
COMMD4-216ENST00000567023 RAD17O75943 681 aa18.29■□□□□ 0.52
COMMD4-216ENST00000567023 GMPSP49915 693 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-216ENST00000567023 SEC31BQ9NQW1 1179 aa18.29■□□□□ 0.52
COMMD4-216ENST00000567023 MKRN1Q9UHC7 482 aaKnown RBP18.29■□□□□ 0.52
COMMD4-216ENST00000567023 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
COMMD4-216ENST00000567023 NEXNQ0ZGT2 675 aa18.28■□□□□ 0.52
COMMD4-216ENST00000567023 G2E3Q7L622 706 aa18.28■□□□□ 0.52
COMMD4-216ENST00000567023 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
COMMD4-216ENST00000567023 EYA3Q99504 573 aa18.28■□□□□ 0.52
COMMD4-216ENST00000567023 PGAP2Q9UHJ9 254 aa18.28■□□□□ 0.52
COMMD4-216ENST00000567023 NEURL1BA8MQ27 555 aa18.27■□□□□ 0.52
COMMD4-216ENST00000567023 C6orf229H3BNL8 230 aa18.27■□□□□ 0.52
COMMD4-216ENST00000567023 VAMP4O75379 141 aa18.27■□□□□ 0.52
COMMD4-216ENST00000567023 HSPA1AP0DMV8 641 aaKnown RBP18.27■□□□□ 0.52
COMMD4-216ENST00000567023 HSPA1BP0DMV9 641 aaKnown RBP18.27■□□□□ 0.52
COMMD4-216ENST00000567023 JARID2Q92833 1246 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-216ENST00000567023 RASSF10A6NK89 507 aa18.26■□□□□ 0.51
COMMD4-216ENST00000567023 ZC3H15Q8WU90 426 aaKnown RBP18.26■□□□□ 0.51
COMMD4-216ENST00000567023 DPF2Q92785 391 aa18.26■□□□□ 0.51
COMMD4-216ENST00000567023 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
COMMD4-216ENST00000567023 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
COMMD4-216ENST00000567023 H7C1W4 665 aa18.25■□□□□ 0.51
COMMD4-216ENST00000567023 CTSWP56202 376 aa18.25■□□□□ 0.51
COMMD4-216ENST00000567023 FLIIQ13045 1269 aa18.25■□□□□ 0.51
COMMD4-216ENST00000567023 CWF19L2Q2TBE0 894 aaKnown RBP18.25■□□□□ 0.51
COMMD4-216ENST00000567023 TTLL11Q8NHH1 800 aa18.25■□□□□ 0.51
COMMD4-216ENST00000567023 ZC3H12CQ9C0D7 883 aaKnown RBP18.25■□□□□ 0.51
COMMD4-216ENST00000567023 CNOT7Q9UIV1 285 aaKnown RBP18.25■□□□□ 0.51
COMMD4-216ENST00000567023 RIMBP2O15034 1052 aa18.24■□□□□ 0.51
COMMD4-216ENST00000567023 VEGFBP49765 207 aa18.24■□□□□ 0.51
COMMD4-216ENST00000567023 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
COMMD4-216ENST00000567023 COL13A1Q5TAT6 717 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-216ENST00000567023 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
COMMD4-216ENST00000567023 DBNDD1Q9H9R9 158 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms